RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 MTA3Q9BTC8 594 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 ZSWIM5Q9P217 1185 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 MYH4Q9Y623 1939 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 CCDC69A6NI79 296 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 GOLGA6L22H0YM25 854 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 PDCP20941 246 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 RHBDL3P58872 404 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 HMGN5P82970 282 aaKnown RBP9.74□□□□□ -0.85
COPS4-201ENST00000264389 WTAPQ15007 396 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 SLC4A8Q2Y0W8 1093 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 HHIPL2Q6UWX4 724 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 LARGE2Q8N3Y3 721 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 ZKSCAN3Q9BRR0 538 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 LY9Q9HBG7 655 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 KCNQ5Q9NR82 932 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 ZNF277Q9NRM2 450 aaPredicted RBP9.74□□□□□ -0.85
COPS4-201ENST00000264389 BRPF3Q9ULD4 1205 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 ZDHHC9Q9Y397 364 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 KIF3AQ9Y496 699 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 CD2APQ9Y5K6 639 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 TNKSO95271 1327 aa9.74□□□□□ -0.85
COPS4-201ENST00000264389 PTPDC1A2A3K4 754 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 VPS37CA5D8V6 355 aaPredicted RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 SMIM22K7EJ46 135 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 ORC4O43929 436 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 DHX16O60231 1041 aaKnown RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 RANBP6O60518 1105 aaKnown RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 JAK2O60674 1132 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 DTNBO60941 627 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 PRDM1O75626 825 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 POLR3DP05423 398 aaPredicted RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 PDIA4P13667 645 aaKnown RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 PTMSP20962 102 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 SYT1P21579 422 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 LIFRP42702 1097 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 CRKP46108 304 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 METAP2P50579 478 aaKnown RBP eCLIP9.73□□□□□ -0.85
COPS4-201ENST00000264389 C12orf60Q5U649 245 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 CLEC17AQ6ZS10 378 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 SGMS1Q86VZ5 419 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 MICU3Q86XE3 530 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 IQCA1Q86XH1 822 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 KIAA0825Q8IV33 1275 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 FAM184AQ8NB25 1140 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 NSUN7Q8NE18 718 aaKnown RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 IGDCC4Q8TDY8 1250 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 VPS33BQ9H267 617 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 NCOA5Q9HCD5 579 aaKnown RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 MKRN1Q9UHC7 482 aaKnown RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 SAP30BPQ9UHR5 308 aaKnown RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.73□□□□□ -0.85
COPS4-201ENST00000264389 MYO3BQ8WXR4 1341 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 GREB1LQ9C091 1923 aaPredicted RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 YDJCA8MPS7 323 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 CPLX1O14810 134 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 ZBTB43O43298 467 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 BAG4O95429 457 aaKnown RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 FGRP09769 529 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 ZSCAN22P10073 491 aaPredicted RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 IARSP41252 1262 aaKnown RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 NT5C2P49902 561 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 EVX2Q03828 476 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 PICALMQ13492 652 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 LARP1BQ659C4 914 aaKnown RBP9.73□□□□□ -0.85
COPS4-201ENST00000264389 APOA5Q6Q788 366 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 SYNE3Q6ZMZ3 975 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 RAB11FIP4Q86YS3 637 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 NIM1KQ8IY84 436 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 SMARCC2Q8TAQ2 1214 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 DDX11Q96FC9 970 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 TAOK3Q9H2K8 898 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 NID2Q14112 1375 aa9.73□□□□□ -0.85
COPS4-201ENST00000264389 TSPY2A6NKD2 308 aa9.72□□□□□ -0.85
COPS4-201ENST00000264389 GOLGA8AA7E2F4 631 aa9.72□□□□□ -0.85
COPS4-201ENST00000264389 F13A1P00488 732 aa9.72□□□□□ -0.85
COPS4-201ENST00000264389 PTGER2P43116 358 aa9.72□□□□□ -0.85
COPS4-201ENST00000264389 RBM5P52756 815 aaKnown RBP eCLIP9.72□□□□□ -0.85
COPS4-201ENST00000264389 HDLBPQ00341 1268 aaKnown RBP9.72□□□□□ -0.85
COPS4-201ENST00000264389 ZSCAN10Q96SZ4 725 aaPredicted RBP9.72□□□□□ -0.85
COPS4-201ENST00000264389 ZNF287Q9HBT7 754 aa9.72□□□□□ -0.85
COPS4-201ENST00000264389 SENP2Q9HC62 589 aa9.72□□□□□ -0.85
COPS4-201ENST00000264389 HPS5Q9UPZ3 1129 aa9.72□□□□□ -0.85
COPS4-201ENST00000264389 SLC12A7Q9Y666 1083 aa9.72□□□□□ -0.85
COPS4-201ENST00000264389 SBF1O95248 1867 aa9.72□□□□□ -0.85
COPS4-201ENST00000264389 CDKL5O76039 1030 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 CTDNEP1O95476 244 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 MCTP1Q6DN14 999 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 CPLX2Q6PUV4 134 aaKnown RBP9.71□□□□□ -0.85
COPS4-201ENST00000264389 TMTC2Q8N394 836 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 DYNLL2Q96FJ2 89 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 ZDHHC15Q96MV8 337 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 MYL10Q9BUA6 226 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 MKNK2Q9HBH9 465 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 USP40Q9NVE5 1235 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 SERPINA10Q9UK55 444 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 MTMR6Q9Y217 621 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 BCS1LQ9Y276 419 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 ATP6V1DQ9Y5K8 247 aa9.71□□□□□ -0.85
COPS4-201ENST00000264389 H3BQV1 296 aa9.7□□□□□ -0.86
COPS4-201ENST00000264389 RXRAP19793 462 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms