RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 TTC6Q86TZ1 520 aa18.46■□□□□ 0.55
VPS26A-201ENST00000263559 ORC4O43929 436 aa18.46■□□□□ 0.54
VPS26A-201ENST00000263559 CDKL5O76039 1030 aa18.46■□□□□ 0.54
VPS26A-201ENST00000263559 SLC3A2P08195 630 aaKnown RBP18.46■□□□□ 0.54
VPS26A-201ENST00000263559 C12orf60Q5U649 245 aa18.46■□□□□ 0.54
VPS26A-201ENST00000263559 OTUD7BQ6GQQ9 843 aa18.46■□□□□ 0.54
VPS26A-201ENST00000263559 CPLX2Q6PUV4 134 aaKnown RBP18.46■□□□□ 0.54
VPS26A-201ENST00000263559 PHKBQ93100 1093 aa18.46■□□□□ 0.54
VPS26A-201ENST00000263559 C8orf76Q96K31 380 aa18.46■□□□□ 0.54
VPS26A-201ENST00000263559 EYA3Q99504 573 aa18.46■□□□□ 0.54
VPS26A-201ENST00000263559 NAV1Q8NEY1 1877 aa18.45■□□□□ 0.54
VPS26A-201ENST00000263559 SLF2Q8IX21 1173 aa18.45■□□□□ 0.54
VPS26A-201ENST00000263559 ENAHQ8N8S7 591 aaPredicted RBP18.45■□□□□ 0.54
VPS26A-201ENST00000263559 CNKSR1Q969H4 720 aa18.45■□□□□ 0.54
VPS26A-201ENST00000263559 G3V3G9 751 aa18.45■□□□□ 0.54
VPS26A-201ENST00000263559 DCAF8Q5TAQ9 597 aa18.45■□□□□ 0.54
VPS26A-201ENST00000263559 CERS3Q8IU89 383 aa18.45■□□□□ 0.54
VPS26A-201ENST00000263559 CERS5Q8N5B7 392 aa18.45■□□□□ 0.54
VPS26A-201ENST00000263559 GJB4Q9NTQ9 266 aa18.45■□□□□ 0.54
VPS26A-201ENST00000263559 NID2Q14112 1375 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 GAKO14976 1311 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 PDE4BQ07343 736 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 IQCA1Q86XH1 822 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 MAPKAPK5Q8IW41 473 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 ZNF654Q8IZM8 581 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 FBXO18Q8NFZ0 1043 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 DLEC1Q9Y238 1755 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 ZNF445P59923 1031 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 FAM47AQ5JRC9 791 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 L1TD1Q5T7N2 865 aaKnown RBP18.44■□□□□ 0.54
VPS26A-201ENST00000263559 MXD3Q9BW11 206 aa18.44■□□□□ 0.54
VPS26A-201ENST00000263559 SCAND2PQ9GZW5 306 aaPredicted RBP18.44■□□□□ 0.54
VPS26A-201ENST00000263559 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
VPS26A-201ENST00000263559 RHBDL3P58872 404 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 TEX11Q8IYF3 940 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 AIFM3Q96NN9 605 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 ECM29Q5VYK3 1845 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 ELP1O95163 1332 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 F8W031 263 aaPredicted RBP18.43■□□□□ 0.54
VPS26A-201ENST00000263559 RTN1Q16799 776 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 NUP133Q8WUM0 1156 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 C7orf43Q8WVR3 580 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 SPATA32Q96LK8 384 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 DBNDD1Q9H9R9 158 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 SUGT1Q9Y2Z0 365 aa18.43■□□□□ 0.54
VPS26A-201ENST00000263559 PLCG2P16885 1265 aa18.42■□□□□ 0.54
VPS26A-201ENST00000263559 IFIT1BQ5T764 474 aaKnown RBP18.42■□□□□ 0.54
VPS26A-201ENST00000263559 ILDR1Q86SU0 546 aaPredicted RBP18.42■□□□□ 0.54
VPS26A-201ENST00000263559 FANCBQ8NB91 859 aa18.42■□□□□ 0.54
VPS26A-201ENST00000263559 LEO1Q8WVC0 666 aaPredicted RBP18.42■□□□□ 0.54
VPS26A-201ENST00000263559 ALG1Q9BT22 464 aa18.42■□□□□ 0.54
VPS26A-201ENST00000263559 KCNQ5Q9NR82 932 aa18.42■□□□□ 0.54
VPS26A-201ENST00000263559 SAP30BPQ9UHR5 308 aaKnown RBP18.42■□□□□ 0.54
VPS26A-201ENST00000263559 ISY1Q9ULR0 285 aaKnown RBP18.42■□□□□ 0.54
VPS26A-201ENST00000263559 DAGLAQ9Y4D2 1042 aa18.42■□□□□ 0.54
VPS26A-201ENST00000263559 NMT2O60551 498 aa18.42■□□□□ 0.54
VPS26A-201ENST00000263559 PLCD1P51178 756 aa18.42■□□□□ 0.54
VPS26A-201ENST00000263559 RCAN1P53805 252 aa18.42■□□□□ 0.54
VPS26A-201ENST00000263559 IFNAR1P17181 557 aa18.41■□□□□ 0.54
VPS26A-201ENST00000263559 PODNQ7Z5L7 613 aa18.41■□□□□ 0.54
VPS26A-201ENST00000263559 AMOTL1Q8IY63 956 aa18.41■□□□□ 0.54
VPS26A-201ENST00000263559 POLR3DP05423 398 aaPredicted RBP18.41■□□□□ 0.54
VPS26A-201ENST00000263559 SSRP1Q08945 709 aaKnown RBP18.41■□□□□ 0.54
VPS26A-201ENST00000263559 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
VPS26A-201ENST00000263559 CFAP45Q9UL16 551 aa18.41■□□□□ 0.54
VPS26A-201ENST00000263559 TTF2Q9UNY4 1162 aaKnown RBP18.41■□□□□ 0.54
VPS26A-201ENST00000263559 MYH1P12882 1939 aa18.4■□□□□ 0.54
VPS26A-201ENST00000263559 ROBO3Q96MS0 1386 aa18.4■□□□□ 0.54
VPS26A-201ENST00000263559 TSPY2A6NKD2 308 aa18.4■□□□□ 0.54
VPS26A-201ENST00000263559 UBE2Q2LH0YL09 131 aa18.4■□□□□ 0.54
VPS26A-201ENST00000263559 XRCC6P12956 609 aaKnown RBP eCLIP18.4■□□□□ 0.54
VPS26A-201ENST00000263559 CCDC196A0A1B0GTZ2 297 aa18.4■□□□□ 0.54
VPS26A-201ENST00000263559 SYCE3A1L190 88 aa18.4■□□□□ 0.54
VPS26A-201ENST00000263559 FMNL1O95466 1100 aaPredicted RBP18.4■□□□□ 0.54
VPS26A-201ENST00000263559 CMTR1Q8N1G2 835 aaKnown RBP18.4■□□□□ 0.54
VPS26A-201ENST00000263559 SYAP1Q96A49 352 aaPredicted RBP18.4■□□□□ 0.54
VPS26A-201ENST00000263559 GRPEL1Q9HAV7 217 aa18.4■□□□□ 0.54
VPS26A-201ENST00000263559 FLT1P17948 1338 aa18.4■□□□□ 0.54
VPS26A-201ENST00000263559 STK36Q9NRP7 1315 aa18.4■□□□□ 0.54
VPS26A-201ENST00000263559 FOCADQ5VW36 1801 aa18.39■□□□□ 0.54
VPS26A-201ENST00000263559 CEBPZQ03701 1054 aaKnown RBP18.39■□□□□ 0.54
VPS26A-201ENST00000263559 CATIPQ7Z7H3 387 aa18.39■□□□□ 0.54
VPS26A-201ENST00000263559 CCDC82Q8N4S0 544 aa18.39■□□□□ 0.54
VPS26A-201ENST00000263559 DDX60LQ5H9U9 1706 aaKnown RBP18.39■□□□□ 0.53
VPS26A-201ENST00000263559 C10orf71Q711Q0 1435 aa18.39■□□□□ 0.53
VPS26A-201ENST00000263559 MRE11P49959 708 aa18.39■□□□□ 0.53
VPS26A-201ENST00000263559 NBPF11Q86T75 865 aa18.39■□□□□ 0.53
VPS26A-201ENST00000263559 RGS22Q8NE09 1264 aa18.39■□□□□ 0.53
VPS26A-201ENST00000263559 FTOQ9C0B1 505 aaKnown RBP eCLIP18.39■□□□□ 0.53
VPS26A-201ENST00000263559 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.53
VPS26A-201ENST00000263559 SCN9AQ15858 1988 aa18.39■□□□□ 0.53
VPS26A-201ENST00000263559 SCNN1DP51172 638 aa18.38■□□□□ 0.53
VPS26A-201ENST00000263559 TFAP4Q01664 338 aa18.38■□□□□ 0.53
VPS26A-201ENST00000263559 CRACR2BQ8N4Y2 399 aaPredicted RBP18.38■□□□□ 0.53
VPS26A-201ENST00000263559 MKNK2Q9HBH9 465 aa18.38■□□□□ 0.53
VPS26A-201ENST00000263559 TROAPQ12815 778 aa18.38■□□□□ 0.53
VPS26A-201ENST00000263559 PPP2R5BQ15173 497 aa18.38■□□□□ 0.53
VPS26A-201ENST00000263559 KRT40Q6A162 431 aa18.38■□□□□ 0.53
VPS26A-201ENST00000263559 SLC44A5Q8NCS7 719 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms