RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 DENND2AQ9ULE3 1009 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 GIPC1O14908 333 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 BACH1O14867 736 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 PPFIA1Q13136 1202 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 CFAP221Q4G0U5 840 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 ZNF202O95125 648 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 INPP5BP32019 993 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 PPP2R5BQ15173 497 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 VAMP4O75379 141 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 RASSF2P50749 326 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 LETM2Q2VYF4 491 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 GKAP1Q5VSY0 366 aaPredicted RBP19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 NUCKS1Q9H1E3 243 aaKnown RBP19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 PPANQ9NQ55 473 aaKnown RBP19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 IRS4O14654 1257 aaPredicted RBP19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 PPFIA2O75334 1257 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 DENND2CQ68D51 928 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 FAM204AQ9H8W3 233 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 BCRP11274 1271 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 EXOC7Q9UPT5 735 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 FLOT1O75955 427 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 PDE4DQ08499 809 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 SRGAP1Q7Z6B7 1085 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 SDCCAG8Q86SQ7 713 aaPredicted RBP19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 CSGALNACT2Q8N6G5 542 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 TNFAIP3P21580 790 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 SLC39A6Q13433 755 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 UHRF1BP1Q6BDS2 1440 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 LZTS2Q9BRK4 669 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 ZBTB21Q9ULJ3 1066 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 ARHGAP6O43182 974 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 PUM3Q15397 648 aaKnown RBP19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 ZNF365Q70YC5 407 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 MYRIPQ8NFW9 859 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 MCUR1Q96AQ8 359 aa19.44■□□□□ 0.7
NOTCH3-201ENST00000263388 I3L4J1 428 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 RXRAP19793 462 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 MTMR3Q13615 1198 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 MAP7Q14244 749 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 PRPF31Q8WWY3 499 aaKnown RBP19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 BIRC3Q13489 604 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 SHANK2Q9UPX8 1470 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 AKNAD1Q5T1N1 836 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 VPS16Q9H269 839 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 RTCBQ9Y3I0 505 aaKnown RBP19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 TRPC3Q13507 836 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 ZNF174Q15697 407 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 PCDH11XQ9BZA7 1347 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 PCDH11YQ9BZA8 1340 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 TAF12Q16514 161 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 YTHDC2Q9H6S0 1430 aaKnown RBP19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 IL2RBP14784 551 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 ZNF445P59923 1031 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 PARP2Q9UGN5 583 aa19.43■□□□□ 0.7
NOTCH3-201ENST00000263388 SECISBP2LQ93073 1101 aaKnown RBP19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 RPGRIP1Q96KN7 1286 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 SLC27A2O14975 620 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 GABPB1Q06547 395 aaPredicted RBP19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 POSTNQ15063 836 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 CHRNA2Q15822 529 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 CCDC84Q86UT8 332 aaPredicted RBP19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 RNF168Q8IYW5 571 aaPredicted RBP19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 ATP2A3Q93084 1043 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 ARHGEF10LQ9HCE6 1279 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 COL17A1Q9UMD9 1497 aaPredicted RBP19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 PAK2Q13177 524 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 PFDN4Q9NQP4 134 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 DKC1O60832 514 aaKnown RBP eCLIP19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 FANCCQ00597 558 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 TTC6Q86TZ1 520 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 PLIN2Q99541 437 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 VEZTQ9HBM0 779 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 SHROOM2Q13796 1616 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 ZNF75DP51815 510 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 CLSTN2Q9H4D0 955 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 FCHSD1Q86WN1 690 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 CCDC170Q8IYT3 715 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 DCAF5Q96JK2 942 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 RAB17Q9H0T7 212 aa19.42■□□□□ 0.7
NOTCH3-201ENST00000263388 LGSNQ5TDP6 509 aa19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 CETN3O15182 167 aa19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 ARHGEF2Q92974 986 aaKnown RBP19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 RAB3IPQ96QF0 476 aaPredicted RBP19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 EYA3Q99504 573 aa19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 STRN3Q13033 797 aa19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 BABAM1Q9NWV8 329 aa19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 KDM2BQ8NHM5 1336 aa19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 KRT9P35527 623 aa19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 NLRP12P59046 1061 aa19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 TACC3Q9Y6A5 838 aa19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 CWF19L2Q2TBE0 894 aaKnown RBP19.41■□□□□ 0.7
NOTCH3-201ENST00000263388 RFC1P35251 1148 aaPredicted RBP19.4■□□□□ 0.7
NOTCH3-201ENST00000263388 HAUS7Q99871 368 aa19.4■□□□□ 0.7
NOTCH3-201ENST00000263388 RASA3Q14644 834 aa19.4■□□□□ 0.7
NOTCH3-201ENST00000263388 TMOD4Q9NZQ9 345 aa19.4■□□□□ 0.7
NOTCH3-201ENST00000263388 RIOK3O14730 519 aaKnown RBP19.4■□□□□ 0.7
NOTCH3-201ENST00000263388 GNA14O95837 355 aa19.4■□□□□ 0.7
NOTCH3-201ENST00000263388 CALCRLQ16602 461 aa19.4■□□□□ 0.7
NOTCH3-201ENST00000263388 WDR62O43379 1518 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms