RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 MAP2K2P36507 400 aa14.96□□□□□ -0.01
CLNS1A-201ENST00000263309 MAP2K1Q02750 393 aaPredicted RBP14.96□□□□□ -0.01
CLNS1A-201ENST00000263309 SREBF2Q12772 1141 aa14.96□□□□□ -0.01
CLNS1A-201ENST00000263309 SDR42E1Q8WUS8 393 aa14.96□□□□□ -0.01
CLNS1A-201ENST00000263309 OSBP2Q969R2 916 aa14.96□□□□□ -0.01
CLNS1A-201ENST00000263309 TEPSINQ96N21 525 aa14.96□□□□□ -0.01
CLNS1A-201ENST00000263309 EHD4Q9H223 541 aa14.96□□□□□ -0.01
CLNS1A-201ENST00000263309 DCP1AQ9NPI6 582 aaPredicted RBP14.96□□□□□ -0.01
CLNS1A-201ENST00000263309 RAD50Q92878 1312 aa14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 USP17L12C9JPN9 530 aa14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 USP17L21D6R901 530 aa14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 ASNSP08243 561 aa14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 NT5C2P49902 561 aa14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 NMIQ13287 307 aaPredicted RBP14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 CERKLQ49MI3 558 aaPredicted RBP14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 ERO1BQ86YB8 467 aa14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 IFNL3Q8IZI9 196 aa14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 CCDC17Q96LX7 622 aa14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 DDX4Q9NQI0 724 aaKnown RBP14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 ATRNL1Q5VV63 1379 aa14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 COL2A1P02458 1487 aaPredicted RBP14.95□□□□□ -0.02
CLNS1A-201ENST00000263309 CCDC171Q6TFL3 1326 aa14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 WDR33Q9C0J8 1336 aaKnown RBP14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 MYH2Q9UKX2 1941 aa14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 ADAMTSL1Q8N6G6 1762 aa14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 DDTLA6NHG4 134 aaPredicted RBP14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 MPHOSPH10O00566 681 aaKnown RBP14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 ZNF213O14771 459 aa14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 CDC45O75419 566 aa14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 ZBTB48P10074 688 aaPredicted RBP14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 GTF2A2P52657 109 aa14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 PPATQ06203 517 aa14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 IMMTQ16891 758 aaKnown RBP14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 SBK1Q52WX2 424 aa14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 CAPNS2Q96L46 248 aa14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 RNF41Q9H4P4 317 aaPredicted RBP14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 PRDM10Q9NQV6 1147 aa14.94□□□□□ -0.02
CLNS1A-201ENST00000263309 MANSC4A6NHS7 340 aaPredicted RBP14.93□□□□□ -0.02
CLNS1A-201ENST00000263309 FMR1Q06787 632 aaKnown RBP eCLIP14.93□□□□□ -0.02
CLNS1A-201ENST00000263309 TRDNQ13061 729 aa14.93□□□□□ -0.02
CLNS1A-201ENST00000263309 LDLRAD1Q5T700 205 aa14.93□□□□□ -0.02
CLNS1A-201ENST00000263309 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
CLNS1A-201ENST00000263309 SCYL3Q8IZE3 742 aa14.93□□□□□ -0.02
CLNS1A-201ENST00000263309 SH2D4AQ9H788 454 aa14.93□□□□□ -0.02
CLNS1A-201ENST00000263309 MAST2Q6P0Q8 1798 aa14.93□□□□□ -0.02
CLNS1A-201ENST00000263309 AKAP11Q9UKA4 1901 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 M0R2C6 588 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 PRKAB2O43741 272 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 ALDH1A1P00352 501 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 PCP11498 1178 aaKnown RBP14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 VEGFBP49765 207 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 MAP3K10Q02779 954 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 ALX1Q15699 326 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 ABCB5Q2M3G0 1257 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 C12orf60Q5U649 245 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 RNF20Q5VTR2 975 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.92□□□□□ -0.023e-7■■■■□ 21.4
CLNS1A-201ENST00000263309 FAM227BQ96M60 508 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 ELP3Q9H9T3 547 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 TOMM22Q9NS69 142 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 ZNF112Q9UJU3 913 aa14.92□□□□□ -0.02
CLNS1A-201ENST00000263309 USP17L5A8MUK1 530 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 GSG1L2A8MUP6 293 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 CA12O43570 354 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 CETPP11597 493 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 CHMLP26374 656 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 CAP2P40123 477 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 PABPC4Q13310 644 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 SNAPC2Q13487 334 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 CYP4F22Q6NT55 531 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 CTR9Q6PD62 1173 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 DLK2Q6UY11 383 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 FASTKD5Q7L8L6 764 aaKnown RBP14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 OPTNQ96CV9 577 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 DSCC1Q9BVC3 393 aa14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
CLNS1A-201ENST00000263309 CXCL11O14625 94 aa14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 REC8O95072 547 aa14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 HSPD1P10809 573 aaKnown RBP14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 GSPT1P15170 499 aaKnown RBP14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 VGLL4Q14135 290 aa14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 SLC4A8Q2Y0W8 1093 aa14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 CCDC178Q5BJE1 867 aa14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 NOL9Q5SY16 702 aaKnown RBP14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 MFSD6Q6ZSS7 791 aa14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 ZKSCAN4Q969J2 545 aaPredicted RBP14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 WBP1LQ9NX94 342 aa14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 TMOD4Q9NZQ9 345 aa14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 ZHX2Q9Y6X8 837 aa14.9□□□□□ -0.02
CLNS1A-201ENST00000263309 ECM29Q5VYK3 1845 aa14.89□□□□□ -0.03
CLNS1A-201ENST00000263309 PAPPA2Q9BXP8 1791 aa14.89□□□□□ -0.03
CLNS1A-201ENST00000263309 A0A0D9SFI3 127 aa14.89□□□□□ -0.03
CLNS1A-201ENST00000263309 SLC10A3P09131 477 aa14.89□□□□□ -0.03
CLNS1A-201ENST00000263309 TSPY3P0CV98 308 aa14.89□□□□□ -0.03
CLNS1A-201ENST00000263309 TSPY8P0CW00 308 aa14.89□□□□□ -0.03
CLNS1A-201ENST00000263309 MCCP23508 829 aa14.89□□□□□ -0.03
CLNS1A-201ENST00000263309 CTCFP49711 727 aaPredicted RBP14.89□□□□□ -0.03
CLNS1A-201ENST00000263309 USP14P54578 494 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms