RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 BCRP11274 1271 aa28.23■■■□□ 2.11
HMG20B-201ENST00000262949 PI4KBQ9UBF8 816 aa28.23■■■□□ 2.11
HMG20B-201ENST00000262949 RBBP6Q7Z6E9 1792 aaKnown RBP28.23■■■□□ 2.11
HMG20B-201ENST00000262949 FAM196BA6NMK8 535 aa28.22■■■□□ 2.11
HMG20B-201ENST00000262949 CYP2E1P05181 493 aaPredicted RBP28.22■■■□□ 2.11
HMG20B-201ENST00000262949 MS4A1P11836 297 aa28.22■■■□□ 2.11
HMG20B-201ENST00000262949 PNMA3Q9UL41 463 aa28.22■■■□□ 2.11
HMG20B-201ENST00000262949 DOCK1Q14185 1865 aa28.21■■■□□ 2.11
HMG20B-201ENST00000262949 CTGFP29279 349 aa28.21■■■□□ 2.11
HMG20B-201ENST00000262949 GRK4P32298 578 aa28.21■■■□□ 2.11
HMG20B-201ENST00000262949 ERC1Q8IUD2 1116 aa28.21■■■□□ 2.11
HMG20B-201ENST00000262949 TRIM34Q9BYJ4 488 aa28.21■■■□□ 2.11
HMG20B-201ENST00000262949 CCDC8Q9H0W5 538 aaPredicted RBP28.21■■■□□ 2.11
HMG20B-201ENST00000262949 AGTPBP1Q9UPW5 1226 aa28.21■■■□□ 2.11
HMG20B-201ENST00000262949 CAP2P40123 477 aa28.2■■■□□ 2.1
HMG20B-201ENST00000262949 ZAP70P43403 619 aa28.2■■■□□ 2.1
HMG20B-201ENST00000262949 PPP4CP60510 307 aa28.2■■■□□ 2.1
HMG20B-201ENST00000262949 CCDC84Q86UT8 332 aaPredicted RBP28.2■■■□□ 2.1
HMG20B-201ENST00000262949 ZNF280CQ8ND82 737 aa28.2■■■□□ 2.1
HMG20B-201ENST00000262949 TGFBRAP1Q8WUH2 860 aa28.2■■■□□ 2.1
HMG20B-201ENST00000262949 GCC1Q96CN9 775 aa28.2■■■□□ 2.1
HMG20B-201ENST00000262949 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.2■■■□□ 2.1
HMG20B-201ENST00000262949 BIN2Q9UBW5 565 aaPredicted RBP28.2■■■□□ 2.1
HMG20B-201ENST00000262949 DBNLQ9UJU6 430 aaKnown RBP28.2■■■□□ 2.1
HMG20B-201ENST00000262949 SPP2Q13103 211 aa28.19■■■□□ 2.1
HMG20B-201ENST00000262949 CEP85Q6P2H3 762 aa28.19■■■□□ 2.1
HMG20B-201ENST00000262949 PROCA1Q8NCQ7 364 aaPredicted RBP28.19■■■□□ 2.1
HMG20B-201ENST00000262949 AS3MTQ9HBK9 375 aa28.19■■■□□ 2.1
HMG20B-201ENST00000262949 ZSWIM8A7E2V4 1837 aa28.19■■■□□ 2.1
HMG20B-201ENST00000262949 USP17L5A8MUK1 530 aa28.18■■■□□ 2.1
HMG20B-201ENST00000262949 PABPC4Q13310 644 aaKnown RBP eCLIP28.18■■■□□ 2.13e-11■□□□□ 9.8
HMG20B-201ENST00000262949 MAPKAPK5Q8IW41 473 aa28.18■■■□□ 2.1
HMG20B-201ENST00000262949 EAF2Q96CJ1 260 aaPredicted RBP28.18■■■□□ 2.1
HMG20B-201ENST00000262949 UBXN2AP68543 259 aa28.17■■■□□ 2.1
HMG20B-201ENST00000262949 HSP90AB4PQ58FF6 505 aa28.17■■■□□ 2.1
HMG20B-201ENST00000262949 FOXP4Q8IVH2 680 aaPredicted RBP28.17■■■□□ 2.1
HMG20B-201ENST00000262949 CRACR2BQ8N4Y2 399 aaPredicted RBP28.17■■■□□ 2.1
HMG20B-201ENST00000262949 PANK1Q8TE04 598 aa28.17■■■□□ 2.1
HMG20B-201ENST00000262949 IDH1O75874 414 aaKnown RBP28.16■■■□□ 2.1
HMG20B-201ENST00000262949 CYP7A1P22680 504 aa28.16■■■□□ 2.1
HMG20B-201ENST00000262949 PRKCZQ05513 592 aa28.16■■■□□ 2.1
HMG20B-201ENST00000262949 CERS3Q8IU89 383 aa28.16■■■□□ 2.1
HMG20B-201ENST00000262949 NKX2-3Q8TAU0 364 aa28.16■■■□□ 2.1
HMG20B-201ENST00000262949 PIH1D3Q9NQM4 214 aaKnown RBP28.16■■■□□ 2.1
HMG20B-201ENST00000262949 TLR7Q9NYK1 1049 aaKnown RBP28.16■■■□□ 2.1
HMG20B-201ENST00000262949 HLA-DOAP06340 250 aa28.15■■■□□ 2.1
HMG20B-201ENST00000262949 ADGRA1Q86SQ6 560 aa28.15■■■□□ 2.1
HMG20B-201ENST00000262949 EXOC6BQ9Y2D4 811 aa28.15■■■□□ 2.1
HMG20B-201ENST00000262949 FLT1P17948 1338 aa28.15■■■□□ 2.1
HMG20B-201ENST00000262949 TNPO2O14787 897 aaKnown RBP28.14■■■□□ 2.1
HMG20B-201ENST00000262949 ASNSP08243 561 aa28.14■■■□□ 2.1
HMG20B-201ENST00000262949 HMGCS2P54868 508 aa28.14■■■□□ 2.1
HMG20B-201ENST00000262949 TREML2Q5T2D2 321 aa28.14■■■□□ 2.1
HMG20B-201ENST00000262949 AACSQ86V21 672 aa28.14■■■□□ 2.1
HMG20B-201ENST00000262949 SLAIN1Q8ND83 568 aa28.14■■■□□ 2.1
HMG20B-201ENST00000262949 MAST2Q6P0Q8 1798 aa28.14■■■□□ 2.09
HMG20B-201ENST00000262949 MAP3K12Q12852 859 aa28.13■■■□□ 2.09
HMG20B-201ENST00000262949 MTFR1Q15390 333 aa28.13■■■□□ 2.09
HMG20B-201ENST00000262949 ANKRD13CQ8N6S4 541 aa28.13■■■□□ 2.09
HMG20B-201ENST00000262949 PALD1Q9ULE6 856 aa28.13■■■□□ 2.09
HMG20B-201ENST00000262949 BRCA2P51587 3418 aa28.12■■■□□ 2.09
HMG20B-201ENST00000262949 TMED8Q6PL24 325 aaPredicted RBP28.12■■■□□ 2.09
HMG20B-201ENST00000262949 COA7Q96BR5 231 aa28.12■■■□□ 2.09
HMG20B-201ENST00000262949 PHIPQ8WWQ0 1821 aa28.12■■■□□ 2.09
HMG20B-201ENST00000262949 PTPRFP10586 1907 aa28.12■■■□□ 2.09
HMG20B-201ENST00000262949 MKI67P46013 3256 aaKnown RBP28.12■■■□□ 2.09
HMG20B-201ENST00000262949 USP5P45974 858 aa28.11■■■□□ 2.09
HMG20B-201ENST00000262949 GCLCP48506 637 aaPredicted RBP28.11■■■□□ 2.09
HMG20B-201ENST00000262949 RRP1BQ14684 758 aaKnown RBP28.11■■■□□ 2.09
HMG20B-201ENST00000262949 FAM110CQ1W6H9 321 aa28.11■■■□□ 2.09
HMG20B-201ENST00000262949 MAGEB6Q8N7X4 407 aa28.11■■■□□ 2.09
HMG20B-201ENST00000262949 RNF208Q9H0X6 261 aa28.11■■■□□ 2.09
HMG20B-201ENST00000262949 GINM1Q9NU53 330 aa28.11■■■□□ 2.09
HMG20B-201ENST00000262949 TMOD4Q9NZQ9 345 aa28.11■■■□□ 2.09
HMG20B-201ENST00000262949 SAP30BPQ9UHR5 308 aaKnown RBP28.11■■■□□ 2.09
HMG20B-201ENST00000262949 GABRQQ9UN88 632 aa28.11■■■□□ 2.09
HMG20B-201ENST00000262949 ADCY3O60266 1144 aa28.1■■■□□ 2.09
HMG20B-201ENST00000262949 HMMRO75330 724 aa28.1■■■□□ 2.09
HMG20B-201ENST00000262949 CCL5P13501 91 aa28.1■■■□□ 2.09
HMG20B-201ENST00000262949 FLT3LGP49771 235 aa28.1■■■□□ 2.09
HMG20B-201ENST00000262949 DYNLL1P63167 89 aaKnown RBP28.1■■■□□ 2.09
HMG20B-201ENST00000262949 SH3D19Q5HYK7 790 aa28.09■■■□□ 2.09
HMG20B-201ENST00000262949 MIGA1Q8NAN2 632 aa28.09■■■□□ 2.09
HMG20B-201ENST00000262949 WDR18Q9BV38 432 aa28.09■■■□□ 2.09
HMG20B-201ENST00000262949 CHMP4BQ9H444 224 aaKnown RBP28.09■■■□□ 2.09
HMG20B-201ENST00000262949 DDX19BQ9UMR2 479 aa28.09■■■□□ 2.09
HMG20B-201ENST00000262949 GJB1P08034 283 aa28.08■■■□□ 2.09
HMG20B-201ENST00000262949 BACE1P56817 501 aa28.08■■■□□ 2.09
HMG20B-201ENST00000262949 METTL16Q86W50 562 aaKnown RBP28.08■■■□□ 2.09
HMG20B-201ENST00000262949 RPAP2Q8IXW5 612 aaPredicted RBP28.08■■■□□ 2.09
HMG20B-201ENST00000262949 CLASRPQ8N2M8 674 aaKnown RBP28.08■■■□□ 2.09
HMG20B-201ENST00000262949 TAOK2Q9UL54 1235 aa28.08■■■□□ 2.09
HMG20B-201ENST00000262949 C19orf81C9J6K1 198 aa28.07■■■□□ 2.08
HMG20B-201ENST00000262949 IRX3P78415 501 aaPredicted RBP28.07■■■□□ 2.08
HMG20B-201ENST00000262949 IRF5Q13568 498 aa28.07■■■□□ 2.08
HMG20B-201ENST00000262949 MTMR2Q13614 643 aa28.07■■■□□ 2.08
HMG20B-201ENST00000262949 TTF1Q15361 905 aaPredicted RBP28.07■■■□□ 2.08
HMG20B-201ENST00000262949 RHPN1Q8TCX5 695 aa28.07■■■□□ 2.08
HMG20B-201ENST00000262949 PXYLP1Q8TE99 480 aa28.07■■■□□ 2.08
HMG20B-201ENST00000262949 ASCC2Q9H1I8 757 aaPredicted RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms