RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TCEANC2Q96MN5 208 aa32.58■■■□□ 2.81
SMARCD3-201ENST00000262188 ENTPD3O75355 529 aa32.57■■■□□ 2.8
SMARCD3-201ENST00000262188 ANAPC15P60006 121 aa32.57■■■□□ 2.8
SMARCD3-201ENST00000262188 RASA3Q14644 834 aa32.57■■■□□ 2.8
SMARCD3-201ENST00000262188 ANAPC4Q9UJX5 808 aa32.57■■■□□ 2.8
SMARCD3-201ENST00000262188 POTEIP0CG38 1075 aa32.56■■■□□ 2.8
SMARCD3-201ENST00000262188 POTEJP0CG39 1038 aa32.56■■■□□ 2.8
SMARCD3-201ENST00000262188 CASTP20810 708 aaKnown RBP32.56■■■□□ 2.8
SMARCD3-201ENST00000262188 TSGA10IPQ3SY00 556 aa32.56■■■□□ 2.8
SMARCD3-201ENST00000262188 RRP12Q5JTH9 1297 aaKnown RBP32.56■■■□□ 2.8
SMARCD3-201ENST00000262188 PRAMEF18Q5VWM3 479 aa32.56■■■□□ 2.8
SMARCD3-201ENST00000262188 TOMM22Q9NS69 142 aa32.56■■■□□ 2.8
SMARCD3-201ENST00000262188 AKNAD1Q5T1N1 836 aa32.56■■■□□ 2.8
SMARCD3-201ENST00000262188 CHST3Q7LGC8 479 aa32.56■■■□□ 2.8
SMARCD3-201ENST00000262188 AMOTL1Q8IY63 956 aa32.55■■■□□ 2.8
SMARCD3-201ENST00000262188 FAM151AQ8WW52 585 aa32.55■■■□□ 2.8
SMARCD3-201ENST00000262188 NMRK2Q9NPI5 230 aa32.55■■■□□ 2.8
SMARCD3-201ENST00000262188 SIPA1L1O43166 1804 aa32.55■■■□□ 2.8
SMARCD3-201ENST00000262188 POLR2AP24928 1970 aaKnown RBP32.54■■■□□ 2.8
SMARCD3-201ENST00000262188 SCN4AP35499 1836 aa32.54■■■□□ 2.8
SMARCD3-201ENST00000262188 B4E1Z4 1266 aa32.54■■■□□ 2.8
SMARCD3-201ENST00000262188 NPM3O75607 178 aaKnown RBP32.54■■■□□ 2.8
SMARCD3-201ENST00000262188 STAG1Q8WVM7 1258 aa32.54■■■□□ 2.8
SMARCD3-201ENST00000262188 IQCA1LA6NCM1 817 aa32.53■■■□□ 2.8
SMARCD3-201ENST00000262188 FKBP1CQ5VVH2 108 aa32.53■■■□□ 2.8
SMARCD3-201ENST00000262188 MFSD6Q6ZSS7 791 aa32.53■■■□□ 2.8
SMARCD3-201ENST00000262188 NEK1Q96PY6 1258 aa32.53■■■□□ 2.8
SMARCD3-201ENST00000262188 CSRNP1Q96S65 589 aa32.53■■■□□ 2.8
SMARCD3-201ENST00000262188 DEFB129Q9H1M3 183 aa32.53■■■□□ 2.8
SMARCD3-201ENST00000262188 USP50Q70EL3 339 aaPredicted RBP32.52■■■□□ 2.8
SMARCD3-201ENST00000262188 TTC6Q86TZ1 520 aa32.52■■■□□ 2.8
SMARCD3-201ENST00000262188 IL17RAQ96F46 866 aa32.52■■■□□ 2.8
SMARCD3-201ENST00000262188 LRRC2Q9BYS8 371 aa32.52■■■□□ 2.8
SMARCD3-201ENST00000262188 DNAJC18Q9H819 358 aa32.52■■■□□ 2.8
SMARCD3-201ENST00000262188 PGAP2Q9UHJ9 254 aa32.52■■■□□ 2.8
SMARCD3-201ENST00000262188 FAM83AQ86UY5 434 aa32.51■■■□□ 2.8
SMARCD3-201ENST00000262188 ATRNL1Q5VV63 1379 aa32.51■■■□□ 2.79
SMARCD3-201ENST00000262188 ROBO3Q96MS0 1386 aa32.51■■■□□ 2.79
SMARCD3-201ENST00000262188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP32.5■■■□□ 2.79
SMARCD3-201ENST00000262188 HLA-DOAP06340 250 aa32.5■■■□□ 2.79
SMARCD3-201ENST00000262188 KRT32Q14532 448 aa32.5■■■□□ 2.79
SMARCD3-201ENST00000262188 TEPSINQ96N21 525 aa32.5■■■□□ 2.79
SMARCD3-201ENST00000262188 ADM5C9JUS6 153 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 TNNI2P48788 182 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 CDK8P49336 464 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 NEK4P51957 841 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 CYB5R4Q7L1T6 521 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 DHX36Q9H2U1 1008 aaKnown RBP32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 ZSWIM6Q9HCJ5 1215 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 SERPINB13Q9UIV8 391 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 KDM4AO75164 1064 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 CD2BP2O95400 341 aaKnown RBP32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 GABPAQ06546 454 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 TNFAIP1Q13829 316 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 FAM47AQ5JRC9 791 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 C16orf86Q6ZW13 317 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 MIGA2Q7L4E1 593 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 NCOA7Q8NI08 942 aa32.49■■■□□ 2.79
SMARCD3-201ENST00000262188 BLOC1S2Q6QNY1 142 aa32.48■■■□□ 2.79
SMARCD3-201ENST00000262188 RALYLQ86SE5 291 aaKnown RBP32.48■■■□□ 2.79
SMARCD3-201ENST00000262188 APOBEC3FQ8IUX4 373 aaKnown RBP32.48■■■□□ 2.79
SMARCD3-201ENST00000262188 MB21D2Q8IYB1 491 aaPredicted RBP32.48■■■□□ 2.79
SMARCD3-201ENST00000262188 LARP6Q9BRS8 491 aaKnown RBP32.48■■■□□ 2.79
SMARCD3-201ENST00000262188 PI4KBQ9UBF8 816 aa32.48■■■□□ 2.79
SMARCD3-201ENST00000262188 RANBP6O60518 1105 aaKnown RBP32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 SLC3A2P08195 630 aaKnown RBP32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 VEGFAP15692 232 aaPredicted RBP32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 ANTXR2P58335 489 aa32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 NBPF12Q5TAG4 269 aaPredicted RBP32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 RUFY3Q7L099 469 aa32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 CRACR2BQ8N4Y2 399 aaPredicted RBP32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 DCPSQ96C86 337 aaKnown RBP32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 RNF41Q9H4P4 317 aaPredicted RBP32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 MKNK2Q9HBH9 465 aa32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 GPHNQ9NQX3 736 aaPredicted RBP32.47■■■□□ 2.79
SMARCD3-201ENST00000262188 FGRP09769 529 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 PSMA5P28066 241 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 PDE4BQ07343 736 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 TRDNQ13061 729 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 RABEP1Q15276 862 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 SHROOM1Q2M3G4 852 aaPredicted RBP32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 NOL8Q76FK4 1167 aaKnown RBP32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 ZKSCAN3Q9BRR0 538 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 TM6SF1Q9BZW5 370 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 ZSWIM5Q9P217 1185 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 FZD1Q9UP38 647 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 CLEC11AQ9Y240 323 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 CYP46A1Q9Y6A2 500 aa32.46■■■□□ 2.79
SMARCD3-201ENST00000262188 RPS6KB1P23443 525 aa32.45■■■□□ 2.79
SMARCD3-201ENST00000262188 COL2A1P02458 1487 aaPredicted RBP32.45■■■□□ 2.79
SMARCD3-201ENST00000262188 SHMT1P34896 483 aa32.45■■■□□ 2.78
SMARCD3-201ENST00000262188 RASA1P20936 1047 aa32.44■■■□□ 2.78
SMARCD3-201ENST00000262188 KRT26Q7Z3Y9 468 aa32.43■■■□□ 2.78
SMARCD3-201ENST00000262188 EHD4Q9H223 541 aa32.43■■■□□ 2.78
SMARCD3-201ENST00000262188 USP48Q86UV5 1035 aa32.43■■■□□ 2.78
SMARCD3-201ENST00000262188 PNMA8AQ86V59 439 aaPredicted RBP32.43■■■□□ 2.78
SMARCD3-201ENST00000262188 GLIS2Q9BZE0 524 aaPredicted RBP32.43■■■□□ 2.78
SMARCD3-201ENST00000262188 KRT23Q9C075 422 aa32.43■■■□□ 2.78
SMARCD3-201ENST00000262188 PITPNM2Q9BZ72 1349 aa32.42■■■□□ 2.78
SMARCD3-201ENST00000262188 PRC1O43663 620 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms