RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 RGS22Q8NE09 1264 aa22.19■■□□□ 1.14
SCARB1-201ENST00000261693 BAG1Q99933 345 aaPredicted RBP22.19■■□□□ 1.14
SCARB1-201ENST00000261693 PRKAB2O43741 272 aa22.19■■□□□ 1.14
SCARB1-201ENST00000261693 NR5A1Q13285 461 aa22.19■■□□□ 1.14
SCARB1-201ENST00000261693 ZNF512BQ96KM6 892 aaPredicted RBP22.19■■□□□ 1.14
SCARB1-201ENST00000261693 ARHGAP6O43182 974 aa22.18■■□□□ 1.14
SCARB1-201ENST00000261693 ZSCAN12O43309 604 aa22.18■■□□□ 1.14
SCARB1-201ENST00000261693 MMP1P03956 469 aa22.18■■□□□ 1.14
SCARB1-201ENST00000261693 PNMA6AP0CW24 399 aaPredicted RBP22.18■■□□□ 1.14
SCARB1-201ENST00000261693 TOGARAM2Q6ZUX3 1019 aa22.18■■□□□ 1.14
SCARB1-201ENST00000261693 PIGBQ92521 554 aa22.18■■□□□ 1.14
SCARB1-201ENST00000261693 WDR24Q96S15 920 aa22.18■■□□□ 1.14
SCARB1-201ENST00000261693 ERICH4A6NGS2 130 aa22.18■■□□□ 1.14
SCARB1-201ENST00000261693 PATL2C9JE40 543 aaKnown RBP22.18■■□□□ 1.14
SCARB1-201ENST00000261693 SAFBQ15424 915 aaKnown RBP eCLIP22.18■■□□□ 1.142e-6■■□□□ 11.8
SCARB1-201ENST00000261693 PCDHB6Q9Y5E3 794 aa22.18■■□□□ 1.14
SCARB1-201ENST00000261693 CHD4Q14839 1912 aa22.18■■□□□ 1.14
SCARB1-201ENST00000261693 LIFRP42702 1097 aa22.17■■□□□ 1.14
SCARB1-201ENST00000261693 GNG11P61952 73 aa22.17■■□□□ 1.14
SCARB1-201ENST00000261693 FBXO2Q9UK22 296 aaPredicted RBP22.17■■□□□ 1.14
SCARB1-201ENST00000261693 CDHR2Q9BYE9 1310 aa22.17■■□□□ 1.14
SCARB1-201ENST00000261693 TADA3O75528 432 aa22.17■■□□□ 1.14
SCARB1-201ENST00000261693 STARD3NLO95772 234 aa22.17■■□□□ 1.14
SCARB1-201ENST00000261693 ARID4AP29374 1257 aaPredicted RBP22.17■■□□□ 1.14
SCARB1-201ENST00000261693 USP49Q70CQ1 688 aa22.17■■□□□ 1.14
SCARB1-201ENST00000261693 COL5A2P05997 1499 aaPredicted RBP22.16■■□□□ 1.14
SCARB1-201ENST00000261693 SEC31AO94979 1220 aaKnown RBP22.16■■□□□ 1.14
SCARB1-201ENST00000261693 MFSD6Q6ZSS7 791 aa22.16■■□□□ 1.14
SCARB1-201ENST00000261693 SPATA5Q8NB90 893 aa22.16■■□□□ 1.14
SCARB1-201ENST00000261693 DESI2Q9BSY9 194 aa22.16■■□□□ 1.14
SCARB1-201ENST00000261693 SEC31BQ9NQW1 1179 aa22.16■■□□□ 1.14
SCARB1-201ENST00000261693 SAMSN1Q9NSI8 373 aaKnown RBP22.16■■□□□ 1.14
SCARB1-201ENST00000261693 HOOK1Q9UJC3 728 aaKnown RBP22.16■■□□□ 1.14
SCARB1-201ENST00000261693 STRCP1A6NGW2 1772 aa22.16■■□□□ 1.14
SCARB1-201ENST00000261693 IFNAR1P17181 557 aa22.16■■□□□ 1.14
SCARB1-201ENST00000261693 TBX2Q13207 712 aaPredicted RBP22.16■■□□□ 1.14
SCARB1-201ENST00000261693 AKNAD1Q5T1N1 836 aa22.16■■□□□ 1.14
SCARB1-201ENST00000261693 TC2NQ8N9U0 490 aa22.16■■□□□ 1.14
SCARB1-201ENST00000261693 SMARCE1Q969G3 411 aa22.16■■□□□ 1.14
SCARB1-201ENST00000261693 RTN1Q16799 776 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 SPECC1LQ69YQ0 1117 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 TMCO3Q6UWJ1 677 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 OXER1Q8TDS5 423 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 NUP133Q8WUM0 1156 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 CARD10Q9BWT7 1032 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 STK36Q9NRP7 1315 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 PTPREP23469 700 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 CASQ1P31415 396 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 EVA1CP58658 441 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 RASGRF1Q13972 1273 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 TRIM22Q8IYM9 498 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 WASF1Q92558 559 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 MED15Q96RN5 788 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 NOL10Q9BSC4 688 aaKnown RBP22.15■■□□□ 1.14
SCARB1-201ENST00000261693 SHANK3Q9BYB0 1731 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 MYH3P11055 1940 aa22.15■■□□□ 1.14
SCARB1-201ENST00000261693 GSG1L2A8MUP6 293 aa22.14■■□□□ 1.14
SCARB1-201ENST00000261693 MYO1BO43795 1136 aa22.14■■□□□ 1.14
SCARB1-201ENST00000261693 UQCRFS1P1P0C7P4 283 aa22.14■■□□□ 1.14
SCARB1-201ENST00000261693 PLA2G4AP47712 749 aa22.14■■□□□ 1.14
SCARB1-201ENST00000261693 TDO2P48775 406 aa22.14■■□□□ 1.14
SCARB1-201ENST00000261693 PUM3Q15397 648 aaKnown RBP22.14■■□□□ 1.14
SCARB1-201ENST00000261693 FCHSD1Q86WN1 690 aa22.14■■□□□ 1.14
SCARB1-201ENST00000261693 ARGLU1Q9NWB6 273 aaPredicted RBP22.14■■□□□ 1.14
SCARB1-201ENST00000261693 TOGARAM1Q9Y4F4 1720 aa22.14■■□□□ 1.13
SCARB1-201ENST00000261693 ZNF18P17022 549 aa22.14■■□□□ 1.13
SCARB1-201ENST00000261693 ALX1Q15699 326 aa22.14■■□□□ 1.13
SCARB1-201ENST00000261693 EFCAB8A8MWE9 144 aa22.13■■□□□ 1.13
SCARB1-201ENST00000261693 MAP3K12Q12852 859 aa22.13■■□□□ 1.13
SCARB1-201ENST00000261693 WTAPQ15007 396 aa22.13■■□□□ 1.13
SCARB1-201ENST00000261693 LPIN2Q92539 896 aa22.13■■□□□ 1.13
SCARB1-201ENST00000261693 SRRTQ9BXP5 876 aaKnown RBP22.13■■□□□ 1.13
SCARB1-201ENST00000261693 ZRANB2O95218 330 aaKnown RBP eCLIP22.13■■□□□ 1.138e-6■■■□□ 17.5
SCARB1-201ENST00000261693 MORC3Q14149 939 aa22.13■■□□□ 1.13
SCARB1-201ENST00000261693 KARSQ15046 597 aaKnown RBP22.13■■□□□ 1.13
SCARB1-201ENST00000261693 LCORLQ8N3X6 602 aa22.13■■□□□ 1.13
SCARB1-201ENST00000261693 TEX13AQ9BXU3 409 aaPredicted RBP22.13■■□□□ 1.13
SCARB1-201ENST00000261693 CABP5Q9NP86 173 aa22.13■■□□□ 1.13
SCARB1-201ENST00000261693 MTF1Q14872 753 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 RILPL1Q5EBL4 403 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 BRINP3Q76B58 766 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 MIGA1Q8NAN2 632 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 MLKLQ8NB16 471 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 KRT23Q9C075 422 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 CSRNP2Q9H175 543 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 CNNM2Q9H8M5 875 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 DCCP43146 1447 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 STX10O60499 249 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 SARSP49591 514 aaKnown RBP22.12■■□□□ 1.13
SCARB1-201ENST00000261693 ENOX1Q8TC92 643 aaKnown RBP22.12■■□□□ 1.13
SCARB1-201ENST00000261693 SLC4A4Q9Y6R1 1079 aa22.12■■□□□ 1.13
SCARB1-201ENST00000261693 PDE8AO60658 829 aa22.11■■□□□ 1.13
SCARB1-201ENST00000261693 FOXP1Q9H334 677 aaPredicted RBP22.11■■□□□ 1.13
SCARB1-201ENST00000261693 FAM205CA6NFA0 338 aa22.11■■□□□ 1.13
SCARB1-201ENST00000261693 CASP1P29466 404 aa22.11■■□□□ 1.13
SCARB1-201ENST00000261693 TEX35Q5T0J7 233 aa22.11■■□□□ 1.13
SCARB1-201ENST00000261693 NT5DC1Q5TFE4 455 aa22.11■■□□□ 1.13
SCARB1-201ENST00000261693 KLHL10Q6JEL2 608 aa22.11■■□□□ 1.13
SCARB1-201ENST00000261693 CRACR2BQ8N4Y2 399 aaPredicted RBP22.11■■□□□ 1.13
SCARB1-201ENST00000261693 MPHOSPH8Q99549 860 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms