RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SAMM50Q9Y512 469 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 BAZ2BQ9UIF8 2168 aaKnown RBP11.45□□□□□ -0.58
PALB2-201ENST00000261584 SYNRGQ9UMZ2 1314 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 CD163L1Q9NR16 1453 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 IRS4O14654 1257 aaPredicted RBP11.44□□□□□ -0.58
PALB2-201ENST00000261584 WASF1Q92558 559 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 ADAM21Q9UKJ8 722 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 CCDC194A0A1B0GVG4 234 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 HEATR3Q7Z4Q2 680 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 CATIPQ7Z7H3 387 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 GREM2Q9H772 168 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 COPRSQ9NQ92 184 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 TRIM10Q9UDY6 481 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 CEP131Q9UPN4 1083 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 PTPRMP28827 1452 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 KCNQ4P56696 695 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 IKQ13123 557 aaPredicted RBP11.44□□□□□ -0.58
PALB2-201ENST00000261584 PRPF4BQ13523 1007 aaKnown RBP11.44□□□□□ -0.58
PALB2-201ENST00000261584 STIM1Q13586 685 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 SLC39A14Q15043 492 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 ZMYM1Q5SVZ6 1142 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 SHC4Q6S5L8 630 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 CYB5R4Q7L1T6 521 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 HDXQ7Z353 690 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 ZNF446Q9NWS9 450 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 ARAP3Q8WWN8 1544 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 FMR1Q06787 632 aaKnown RBP eCLIP11.44□□□□□ -0.58
PALB2-201ENST00000261584 APOA5Q6Q788 366 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 IQCA1Q86XH1 822 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 PLBD2Q8NHP8 589 aa11.44□□□□□ -0.58
PALB2-201ENST00000261584 ZNF274Q96GC6 653 aaPredicted RBP11.44□□□□□ -0.58
PALB2-201ENST00000261584 PPRC1Q5VV67 1664 aaKnown RBP11.43□□□□□ -0.58
PALB2-201ENST00000261584 ZNF609O15014 1411 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 SND1Q7KZF4 910 aaKnown RBP eCLIP11.43□□□□□ -0.58
PALB2-201ENST00000261584 TBC1D10CQ8IV04 446 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 MKNK2Q9HBH9 465 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 FAM207AQ9NSI2 230 aaPredicted RBP11.43□□□□□ -0.58
PALB2-201ENST00000261584 MAN1B1Q9UKM7 699 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 ADGRB1O14514 1584 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 MROH7-TTC4A0A0A0MT08 1334 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
PALB2-201ENST00000261584 EFCAB8A8MWE9 144 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
PALB2-201ENST00000261584 NOP2P46087 812 aaKnown RBP11.43□□□□□ -0.58
PALB2-201ENST00000261584 BCAMP50895 628 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 DSCC1Q9BVC3 393 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 FAM204AQ9H8W3 233 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 TMCO5BA8MYB1 307 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 ASIC1P78348 528 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 SLC7A5Q01650 507 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 NBPF11Q86T75 865 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 NAPGQ99747 312 aaPredicted RBP11.43□□□□□ -0.58
PALB2-201ENST00000261584 TBC1D7Q9P0N9 293 aa11.43□□□□□ -0.58
PALB2-201ENST00000261584 LUC7L2Q9Y383 392 aaKnown RBP11.43□□□□□ -0.58
PALB2-201ENST00000261584 STARD3NLO95772 234 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 IGHMBP2P38935 993 aaKnown RBP11.42□□□□□ -0.58
PALB2-201ENST00000261584 PLA2G4AP47712 749 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 TTC31Q49AM3 519 aaPredicted RBP11.42□□□□□ -0.58
PALB2-201ENST00000261584 CC2D1AQ6P1N0 951 aaPredicted RBP11.42□□□□□ -0.58
PALB2-201ENST00000261584 NOSTRINQ8IVI9 506 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 GPKOWQ92917 476 aaPredicted RBP eCLIP11.42□□□□□ -0.58
PALB2-201ENST00000261584 MRPL44Q9H9J2 332 aaKnown RBP11.42□□□□□ -0.58
PALB2-201ENST00000261584 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 CCDC196A0A1B0GTZ2 297 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 GOLGA6L9A6NEM1 432 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 RDXP35241 583 aaKnown RBP11.42□□□□□ -0.58
PALB2-201ENST00000261584 ZCRB1Q8TBF4 217 aaKnown RBP11.42□□□□□ -0.58
PALB2-201ENST00000261584 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.42□□□□□ -0.58
PALB2-201ENST00000261584 ZSWIM5Q9P217 1185 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 DEPDC5O75140 1603 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 LAMC1P11047 1609 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 GUCY2FP51841 1108 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 CEP57Q86XR8 500 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 VSTM4Q8IW00 320 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 CEP112Q8N8E3 955 aa11.42□□□□□ -0.58
PALB2-201ENST00000261584 SHPRHQ149N8 1683 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 SHTN1A0MZ66 631 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
PALB2-201ENST00000261584 PDE6BP35913 854 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 CCT5P48643 541 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 EIF6P56537 245 aaKnown RBP11.41□□□□□ -0.58
PALB2-201ENST00000261584 TCERG1LQ5VWI1 586 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 DYMQ7RTS9 669 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 GPR161Q8N6U8 529 aaKnown RBP11.41□□□□□ -0.58
PALB2-201ENST00000261584 SYMPKQ92797 1274 aaKnown RBP11.41□□□□□ -0.58
PALB2-201ENST00000261584 TRIM31Q9BZY9 425 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 GBP3Q9H0R5 595 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 RRP15Q9Y3B9 282 aaKnown RBP11.41□□□□□ -0.58
PALB2-201ENST00000261584 ADGRB3O60242 1522 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 MYO1CO00159 1063 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 CUTAO60888 179 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 ADAMTS2O95450 1211 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 SLC5A1P13866 664 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 PDE6AP16499 860 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 LLGL1Q15334 1064 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 CPVLQ9H3G5 476 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 NLRC4Q9NPP4 1024 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 ZFYP08048 801 aaPredicted RBP11.41□□□□□ -0.58
PALB2-201ENST00000261584 TBC1D8BQ0IIM8 1120 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms