RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 GADL1Q6ZQY3 521 aa20.67■□□□□ 0.9
CGREF1-201ENST00000260595 SH3TC2Q8TF17 1288 aa20.67■□□□□ 0.9
CGREF1-201ENST00000260595 NOL10Q9BSC4 688 aaKnown RBP20.67■□□□□ 0.9
CGREF1-201ENST00000260595 EXOC6BQ9Y2D4 811 aa20.67■□□□□ 0.9
CGREF1-201ENST00000260595 DOCK1Q14185 1865 aa20.67■□□□□ 0.9
CGREF1-201ENST00000260595 PDE4DIPQ5VU43 2346 aa20.66■□□□□ 0.9
CGREF1-201ENST00000260595 PLCG2P16885 1265 aa20.66■□□□□ 0.9
CGREF1-201ENST00000260595 TGFBRAP1Q8WUH2 860 aa20.66■□□□□ 0.9
CGREF1-201ENST00000260595 TMEM106CQ9BVX2 250 aa20.66■□□□□ 0.9
CGREF1-201ENST00000260595 DHX36Q9H2U1 1008 aaKnown RBP20.66■□□□□ 0.9
CGREF1-201ENST00000260595 PI4KBQ9UBF8 816 aa20.66■□□□□ 0.9
CGREF1-201ENST00000260595 HERC5Q9UII4 1024 aaKnown RBP20.66■□□□□ 0.9
CGREF1-201ENST00000260595 RBBP6Q7Z6E9 1792 aaKnown RBP20.66■□□□□ 0.9
CGREF1-201ENST00000260595 PHIPQ8WWQ0 1821 aa20.66■□□□□ 0.9
CGREF1-201ENST00000260595 FLT1P17948 1338 aa20.65■□□□□ 0.9
CGREF1-201ENST00000260595 SLC34A2O95436 690 aa20.65■□□□□ 0.9
CGREF1-201ENST00000260595 FMNL1O95466 1100 aaPredicted RBP20.65■□□□□ 0.9
CGREF1-201ENST00000260595 METTL16Q86W50 562 aaKnown RBP20.65■□□□□ 0.9
CGREF1-201ENST00000260595 MAPKAPK5Q8IW41 473 aa20.65■□□□□ 0.9
CGREF1-201ENST00000260595 AGTPBP1Q9UPW5 1226 aa20.65■□□□□ 0.9
CGREF1-201ENST00000260595 MAST2Q6P0Q8 1798 aa20.64■□□□□ 0.9
CGREF1-201ENST00000260595 MS4A1P11836 297 aa20.64■□□□□ 0.89
CGREF1-201ENST00000260595 HOXD10P28358 340 aa20.64■□□□□ 0.89
CGREF1-201ENST00000260595 SPP2Q13103 211 aa20.64■□□□□ 0.89
CGREF1-201ENST00000260595 ERC1Q8IUD2 1116 aa20.64■□□□□ 0.89
CGREF1-201ENST00000260595 DNAJC18Q9H819 358 aa20.64■□□□□ 0.89
CGREF1-201ENST00000260595 NDUFB9Q9Y6M9 179 aa20.64■□□□□ 0.89
CGREF1-201ENST00000260595 CYP7A1P22680 504 aa20.63■□□□□ 0.89
CGREF1-201ENST00000260595 DYNLL1P63167 89 aaKnown RBP20.63■□□□□ 0.89
CGREF1-201ENST00000260595 TREML2Q5T2D2 321 aa20.63■□□□□ 0.89
CGREF1-201ENST00000260595 AACSQ86V21 672 aa20.63■□□□□ 0.89
CGREF1-201ENST00000260595 PROCA1Q8NCQ7 364 aaPredicted RBP20.63■□□□□ 0.89
CGREF1-201ENST00000260595 ZNF280CQ8ND82 737 aa20.63■□□□□ 0.89
CGREF1-201ENST00000260595 TBC1D2Q9BYX2 928 aa20.63■□□□□ 0.89
CGREF1-201ENST00000260595 ANTXR1Q9H6X2 564 aa20.63■□□□□ 0.89
CGREF1-201ENST00000260595 MYPNQ86TC9 1320 aa20.62■□□□□ 0.89
CGREF1-201ENST00000260595 MYCP01106 439 aaPredicted RBP20.62■□□□□ 0.89
CGREF1-201ENST00000260595 JAG1P78504 1218 aa20.62■□□□□ 0.89
CGREF1-201ENST00000260595 SLC4A8Q2Y0W8 1093 aa20.62■□□□□ 0.89
CGREF1-201ENST00000260595 FOXP4Q8IVH2 680 aaPredicted RBP20.62■□□□□ 0.89
CGREF1-201ENST00000260595 SIRT2Q8IXJ6 389 aa20.62■□□□□ 0.89
CGREF1-201ENST00000260595 RHPN1Q8TCX5 695 aa20.62■□□□□ 0.89
CGREF1-201ENST00000260595 ZBTB40Q9NUA8 1239 aa20.62■□□□□ 0.89
CGREF1-201ENST00000260595 PALD1Q9ULE6 856 aa20.62■□□□□ 0.89
CGREF1-201ENST00000260595 PTPRFP10586 1907 aa20.62■□□□□ 0.89
CGREF1-201ENST00000260595 BRCA2P51587 3418 aa20.61■□□□□ 0.89
CGREF1-201ENST00000260595 USP17L5A8MUK1 530 aa20.61■□□□□ 0.89
CGREF1-201ENST00000260595 IDH1O75874 414 aaKnown RBP20.61■□□□□ 0.89
CGREF1-201ENST00000260595 FCGRTP55899 365 aa20.61■□□□□ 0.89
CGREF1-201ENST00000260595 PRKCZQ05513 592 aa20.61■□□□□ 0.89
CGREF1-201ENST00000260595 HSP90AB4PQ58FF6 505 aa20.61■□□□□ 0.89
CGREF1-201ENST00000260595 SH3D19Q5HYK7 790 aa20.61■□□□□ 0.89
CGREF1-201ENST00000260595 RPAP2Q8IXW5 612 aaPredicted RBP20.61■□□□□ 0.89
CGREF1-201ENST00000260595 IL1RAPL2Q9NP60 686 aa20.61■□□□□ 0.89
CGREF1-201ENST00000260595 COG6Q9Y2V7 657 aa20.61■□□□□ 0.89
CGREF1-201ENST00000260595 SIPA1L1O43166 1804 aa20.61■□□□□ 0.89
CGREF1-201ENST00000260595 KIAA0100Q14667 2235 aaKnown RBP20.61■□□□□ 0.89
CGREF1-201ENST00000260595 MYO5AQ9Y4I1 1855 aaKnown RBP20.6■□□□□ 0.89
CGREF1-201ENST00000260595 MKI67P46013 3256 aaKnown RBP20.6■□□□□ 0.89
CGREF1-201ENST00000260595 GRK4P32298 578 aa20.6■□□□□ 0.89
CGREF1-201ENST00000260595 HMGCS2P54868 508 aa20.6■□□□□ 0.89
CGREF1-201ENST00000260595 MTFR1Q15390 333 aa20.6■□□□□ 0.89
CGREF1-201ENST00000260595 MAGEB6Q8N7X4 407 aa20.6■□□□□ 0.89
CGREF1-201ENST00000260595 RAET1EQ8TD07 263 aa20.6■□□□□ 0.89
CGREF1-201ENST00000260595 WDR18Q9BV38 432 aa20.6■□□□□ 0.89
CGREF1-201ENST00000260595 DDX19BQ9UMR2 479 aa20.6■□□□□ 0.89
CGREF1-201ENST00000260595 GABRQQ9UN88 632 aa20.6■□□□□ 0.89
CGREF1-201ENST00000260595 SHROOM1Q2M3G4 852 aaPredicted RBP20.59■□□□□ 0.89
CGREF1-201ENST00000260595 MIGA1Q8NAN2 632 aa20.59■□□□□ 0.89
CGREF1-201ENST00000260595 SMCR8Q8TEV9 937 aaPredicted RBP20.59■□□□□ 0.89
CGREF1-201ENST00000260595 SAP30BPQ9UHR5 308 aaKnown RBP20.59■□□□□ 0.89
CGREF1-201ENST00000260595 TMED8Q6PL24 325 aaPredicted RBP20.58■□□□□ 0.89
CGREF1-201ENST00000260595 ANKRD13CQ8N6S4 541 aa20.58■□□□□ 0.89
CGREF1-201ENST00000260595 AS3MTQ9HBK9 375 aa20.58■□□□□ 0.89
CGREF1-201ENST00000260595 RCAN3Q9UKA8 241 aa20.58■□□□□ 0.89
CGREF1-201ENST00000260595 PNMA3Q9UL41 463 aa20.58■□□□□ 0.89
CGREF1-201ENST00000260595 ASNSP08243 561 aa20.57■□□□□ 0.88
CGREF1-201ENST00000260595 MAP3K12Q12852 859 aa20.57■□□□□ 0.88
CGREF1-201ENST00000260595 CERS3Q8IU89 383 aa20.57■□□□□ 0.88
CGREF1-201ENST00000260595 CRACR2BQ8N4Y2 399 aaPredicted RBP20.57■□□□□ 0.88
CGREF1-201ENST00000260595 KIF1BPQ96EK5 621 aa20.57■□□□□ 0.88
CGREF1-201ENST00000260595 CDK5RAP2Q96SN8 1893 aa20.56■□□□□ 0.88
CGREF1-201ENST00000260595 FOCADQ5VW36 1801 aa20.56■□□□□ 0.88
CGREF1-201ENST00000260595 FLT3LGP49771 235 aa20.56■□□□□ 0.88
CGREF1-201ENST00000260595 BACE1P56817 501 aa20.56■□□□□ 0.88
CGREF1-201ENST00000260595 FAM110CQ1W6H9 321 aa20.56■□□□□ 0.88
CGREF1-201ENST00000260595 CLASRPQ8N2M8 674 aaKnown RBP20.56■□□□□ 0.88
CGREF1-201ENST00000260595 RIOK1Q9BRS2 568 aaKnown RBP20.56■□□□□ 0.88
CGREF1-201ENST00000260595 ASCC2Q9H1I8 757 aaPredicted RBP20.56■□□□□ 0.88
CGREF1-201ENST00000260595 GINM1Q9NU53 330 aa20.56■□□□□ 0.88
CGREF1-201ENST00000260595 LOC285556D6RIA3 1793 aa20.56■□□□□ 0.88
CGREF1-201ENST00000260595 HMMRO75330 724 aa20.55■□□□□ 0.88
CGREF1-201ENST00000260595 GDF11O95390 407 aa20.55■□□□□ 0.88
CGREF1-201ENST00000260595 HLA-DOAP06340 250 aa20.55■□□□□ 0.88
CGREF1-201ENST00000260595 MTMR2Q13614 643 aa20.55■□□□□ 0.88
CGREF1-201ENST00000260595 SLAIN1Q8ND83 568 aa20.55■□□□□ 0.88
CGREF1-201ENST00000260595 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.55■□□□□ 0.88
CGREF1-201ENST00000260595 SHISA4Q96DD7 197 aa20.55■□□□□ 0.88
CGREF1-201ENST00000260595 ATAD5Q96QE3 1844 aa20.55■□□□□ 0.88
CGREF1-201ENST00000260595 APBB1O00213 710 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms