RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 IQGAP2Q13576 1575 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 ZBTB43O43298 467 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 RPLP2P05387 115 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 MYL3P08590 195 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 CALRP27797 417 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 PPARGP37231 505 aaPredicted RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 WASHC5Q12768 1159 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 FLIIQ13045 1269 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 SLC9C2Q5TAH2 1124 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 CWC27Q6UX04 472 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 RNF180Q86T96 592 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 CCDC65Q8IXS2 484 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 TNS4Q8IZW8 715 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 THEM5Q8N1Q8 247 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 ZNF713Q8N859 430 aaPredicted RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 LINS1Q8NG48 757 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 C14orf93Q9H972 538 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 HOXC10Q9NYD6 342 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 SLC4A7Q9Y6M7 1214 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 KDM5BQ9UGL1 1544 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 PIK3C2GO75747 1445 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 MROH5Q6ZUA9 1318 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 DENND3A2RUS2 1198 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 PI4K2BG5E9Z4 385 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 ZMYND10O75800 440 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 YEATS4O95619 227 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 STAG3L1P0CL83 205 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 EN1Q05925 392 aaPredicted RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 RAD51Q06609 339 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 NBPF9Q3BBW0 867 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 GIMAP8Q8ND71 665 aaPredicted RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 SPDYE1Q8NFV5 336 aaPredicted RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 PI4K2BQ8TCG2 481 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 LMBR1Q8WVP7 490 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 DYDC1Q8WWB3 177 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 JAKMIP2Q96AA8 810 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 NOP58Q9Y2X3 529 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 IPPQ9Y573 584 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 THOC2Q8NI27 1593 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 LOC102724428A0A0B4J2F2 783 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 MOCS3O95396 460 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 ZNF18P17022 549 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 PPP2R1AP30153 589 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 SIK1P57059 783 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 TCP10Q12799 353 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 MKRN3Q13064 507 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 AAK1Q2M2I8 961 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 ARHGAP29Q52LW3 1261 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 E4F1Q66K89 784 aaPredicted RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 KIAA0825Q8IV33 1275 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 RYBPQ8N488 228 aaPredicted RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 CEP63Q96MT8 703 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.52□□□□□ -1.69
RNF38-201ENST00000259605 KATNAL1Q9BW62 490 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 DHX36Q9H2U1 1008 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 SNRKQ9NRH2 765 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 NUP160Q12769 1436 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 USP17L3A6NCW0 530 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 USP17L4A6NCW7 530 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 SEMA3EO15041 775 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 CA12O43570 354 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 FDX1P10109 184 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 EEF2P13639 858 aaKnown RBP4.51□□□□□ -1.69
RNF38-201ENST00000259605 ALDH1L2Q3SY69 923 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 C9orf131Q5VYM1 1079 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 USP17L1Q7RTZ2 530 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 OXCT2Q9BYC2 517 aaPredicted RBP4.51□□□□□ -1.69
RNF38-201ENST00000259605 CCDC68Q9H2F9 335 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 IFT122Q9HBG6 1241 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 IL1RAPL2Q9NP60 686 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 MAP10Q9P2G4 905 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 WDR46O15213 610 aaKnown RBP4.51□□□□□ -1.69
RNF38-201ENST00000259605 CETPP11597 493 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 CEBPZQ03701 1054 aaKnown RBP4.51□□□□□ -1.69
RNF38-201ENST00000259605 SPAG1Q07617 926 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 SNAPC2Q13487 334 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 KIAA0753Q2KHM9 967 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 CERKLQ49MI3 558 aaPredicted RBP4.51□□□□□ -1.69
RNF38-201ENST00000259605 TADA2BQ86TJ2 420 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 NOP9Q86U38 636 aaKnown RBP4.51□□□□□ -1.69
RNF38-201ENST00000259605 C7orf31Q8N865 590 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 PLBD2Q8NHP8 589 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 ATP6V0A1Q93050 837 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 VPS50Q96JG6 964 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 BABAM1Q9NWV8 329 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 SWAP70Q9UH65 585 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 TESPA1A2RU30 521 aaPredicted RBP4.51□□□□□ -1.69
RNF38-201ENST00000259605 E7EVH7 732 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 GRM8O00222 908 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 NEMP1O14524 444 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 KDM1AO60341 852 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 POLR2MP0CAP2 368 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 IGFBP4P22692 258 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 MCM3P25205 808 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 MMP14P50281 582 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 RASGRF1Q13972 1273 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 UBE4AQ14139 1066 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 PPP2R5BQ15173 497 aa4.51□□□□□ -1.69
RNF38-201ENST00000259605 PREPLQ4J6C6 727 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms