RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 TEX11Q8IYF3 940 aa10.34□□□□□ -0.75
TMEM258-201ENST00000257262 MIGA1Q8NAN2 632 aa10.34□□□□□ -0.75
TMEM258-201ENST00000257262 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.34□□□□□ -0.751e-6■■■■■ 32.7
TMEM258-201ENST00000257262 OTUD7AQ8TE49 926 aaPredicted RBP10.34□□□□□ -0.75
TMEM258-201ENST00000257262 HOOK2Q96ED9 719 aa10.34□□□□□ -0.75
TMEM258-201ENST00000257262 GPATCH3Q96I76 525 aa10.34□□□□□ -0.75
TMEM258-201ENST00000257262 ZNF532Q9HCE3 1301 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 MYH7P12883 1935 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 SLURP2P0DP57 97 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 PDE6AP16499 860 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 MAP3K9P80192 1104 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 DCAF15Q66K64 600 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 TMED8Q6PL24 325 aaPredicted RBP10.33□□□□□ -0.76
TMEM258-201ENST00000257262 TGFBRAP1Q8WUH2 860 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 ZKSCAN4Q969J2 545 aaPredicted RBP10.33□□□□□ -0.76
TMEM258-201ENST00000257262 CSRNP1Q96S65 589 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 ZNF341Q9BYN7 854 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 OSBPL5Q9H0X9 879 aaPredicted RBP10.33□□□□□ -0.76
TMEM258-201ENST00000257262 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 ELP3Q9H9T3 547 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 TTC41PQ6P2S7 1318 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 SALL3Q9BXA9 1300 aa10.33□□□□□ -0.76
TMEM258-201ENST00000257262 MAGEB6P1A0A0J9YX57 407 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 TCRBV5S4A2TA0A5A2 114 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 RIOK3O14730 519 aaKnown RBP10.32□□□□□ -0.76
TMEM258-201ENST00000257262 FOXN1O15353 648 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 CHGBP05060 677 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 MX1P20591 662 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 ADD2P35612 726 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 SLFNL1Q499Z3 407 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 SPRYD7Q5W111 196 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 MAPKAPK5Q8IW41 473 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 PI4K2BQ8TCG2 481 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 WRNIP1Q96S55 665 aa10.32□□□□□ -0.76
TMEM258-201ENST00000257262 LAMB1P07942 1786 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 MYH1P12882 1939 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 ATRNL1Q5VV63 1379 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 ERC2O15083 957 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 SLC34A2O95436 690 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 ZBTB48P10074 688 aaPredicted RBP10.31□□□□□ -0.76
TMEM258-201ENST00000257262 INPP5BP32019 993 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 MAP3K10Q02779 954 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 VGLL4Q14135 290 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 ZSCAN25Q6NSZ9 544 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 AIDAQ96BJ3 306 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 WNK4Q96J92 1243 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 RIOK1Q9BRS2 568 aaKnown RBP10.31□□□□□ -0.76
TMEM258-201ENST00000257262 BEGAINQ9BUH8 593 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 LNPKQ9C0E8 428 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.31□□□□□ -0.76
TMEM258-201ENST00000257262 ZNF112Q9UJU3 913 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 CSADQ9Y600 493 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 FLT1P17948 1338 aa10.31□□□□□ -0.76
TMEM258-201ENST00000257262 SIPA1L1O43166 1804 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 COL2A1P02458 1487 aaPredicted RBP10.3□□□□□ -0.76
TMEM258-201ENST00000257262 FAM196BA6NMK8 535 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 PHF20L1A8MW92 1017 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 GLRX3O76003 335 aaKnown RBP10.3□□□□□ -0.76
TMEM258-201ENST00000257262 GJA5P36382 358 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 USP5P45974 858 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 TM4SF4P48230 202 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 PDE1AP54750 535 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 NUCB1Q02818 461 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 UBE3CQ15386 1083 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 CERS3Q8IU89 383 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 KBTBD3Q8NAB2 608 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 OPTNQ96CV9 577 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 DHX36Q9H2U1 1008 aaKnown RBP10.3□□□□□ -0.76
TMEM258-201ENST00000257262 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.3□□□□□ -0.76
TMEM258-201ENST00000257262 STAP2Q9UGK3 403 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 SAP30BPQ9UHR5 308 aaKnown RBP10.3□□□□□ -0.76
TMEM258-201ENST00000257262 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 PALD1Q9ULE6 856 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 SNCAIPQ9Y6H5 919 aa10.3□□□□□ -0.76
TMEM258-201ENST00000257262 TBC1D12O60347 775 aa10.29□□□□□ -0.76
TMEM258-201ENST00000257262 LCORLQ8N3X6 602 aa10.29□□□□□ -0.76
TMEM258-201ENST00000257262 PUS7LQ9H0K6 701 aaKnown RBP10.29□□□□□ -0.76
TMEM258-201ENST00000257262 ARMT1Q9H993 441 aa10.29□□□□□ -0.76
TMEM258-201ENST00000257262 RNF186Q9NXI6 227 aa10.29□□□□□ -0.76
TMEM258-201ENST00000257262 PI4KBQ9UBF8 816 aa10.29□□□□□ -0.76
TMEM258-201ENST00000257262 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
TMEM258-201ENST00000257262 MANSC4A6NHS7 340 aaPredicted RBP10.28□□□□□ -0.76
TMEM258-201ENST00000257262 SPDYE5A6NIY4 337 aa10.28□□□□□ -0.76
TMEM258-201ENST00000257262 RNF113AO15541 343 aaKnown RBP10.28□□□□□ -0.76
TMEM258-201ENST00000257262 TRPA1O75762 1119 aa10.28□□□□□ -0.76
TMEM258-201ENST00000257262 MBD4O95243 580 aa10.28□□□□□ -0.76
TMEM258-201ENST00000257262 HSPA8P11142 646 aaKnown RBP10.28□□□□□ -0.76
TMEM258-201ENST00000257262 CTCFP49711 727 aaPredicted RBP10.28□□□□□ -0.76
TMEM258-201ENST00000257262 LBX1P52954 281 aa10.28□□□□□ -0.76
TMEM258-201ENST00000257262 INHBEP58166 350 aa10.28□□□□□ -0.76
TMEM258-201ENST00000257262 SREBF2Q12772 1141 aa10.28□□□□□ -0.76
TMEM258-201ENST00000257262 SLC4A8Q2Y0W8 1093 aa10.28□□□□□ -0.76
TMEM258-201ENST00000257262 ERO1BQ86YB8 467 aa10.28□□□□□ -0.76
TMEM258-201ENST00000257262 FOXP4Q8IVH2 680 aaPredicted RBP10.28□□□□□ -0.76
TMEM258-201ENST00000257262 SDR42E1Q8WUS8 393 aa10.28□□□□□ -0.76
TMEM258-201ENST00000257262 RNF25Q96BH1 459 aaPredicted RBP10.28□□□□□ -0.76
TMEM258-201ENST00000257262 CRNKL1Q9BZJ0 848 aaKnown RBP10.28□□□□□ -0.76
TMEM258-201ENST00000257262 ATAD5Q96QE3 1844 aa10.28□□□□□ -0.76
TMEM258-201ENST00000257262 DOCK1Q14185 1865 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms