RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 ST5P78524 1137 aa21.69■■□□□ 1.06
PPFIA1-201ENST00000253925 PTPN12Q05209 780 aaKnown RBP21.69■■□□□ 1.06
PPFIA1-201ENST00000253925 RHOXF2Q9BQY4 288 aa21.69■■□□□ 1.06
PPFIA1-201ENST00000253925 NDUFA8P51970 172 aa21.69■■□□□ 1.06
PPFIA1-201ENST00000253925 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
PPFIA1-201ENST00000253925 CCDC122Q5T0U0 273 aa21.69■■□□□ 1.06
PPFIA1-201ENST00000253925 HDXQ7Z353 690 aa21.69■■□□□ 1.06
PPFIA1-201ENST00000253925 C10orf67Q8IYJ2 551 aa21.69■■□□□ 1.06
PPFIA1-201ENST00000253925 PRDM1O75626 825 aa21.68■■□□□ 1.06
PPFIA1-201ENST00000253925 CYP26C1Q6V0L0 522 aa21.68■■□□□ 1.06
PPFIA1-201ENST00000253925 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
PPFIA1-201ENST00000253925 TMTC1Q8IUR5 882 aa21.68■■□□□ 1.06
PPFIA1-201ENST00000253925 ZDHHC9Q9Y397 364 aa21.68■■□□□ 1.06
PPFIA1-201ENST00000253925 NAPGQ99747 312 aaPredicted RBP21.68■■□□□ 1.06
PPFIA1-201ENST00000253925 ARHGEF40Q8TER5 1519 aa21.68■■□□□ 1.06
PPFIA1-201ENST00000253925 PAK1Q13153 545 aa21.68■■□□□ 1.06
PPFIA1-201ENST00000253925 DDX17Q92841 729 aaKnown RBP21.68■■□□□ 1.06
PPFIA1-201ENST00000253925 CDCA7Q9BWT1 371 aaPredicted RBP21.68■■□□□ 1.06
PPFIA1-201ENST00000253925 MAATS1Q7Z4T9 603 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 NEK11Q8NG66 645 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 REREQ9P2R6 1566 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 CCDC172P0C7W6 258 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 CAPN2P17655 700 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 UBE3CQ15386 1083 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 ZNF654Q8IZM8 581 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 MAST3O60307 1309 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 IFNL3Q8IZI9 196 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 HIBADHP31937 336 aaKnown RBP21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 CHMP4BP1P59074 171 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 TBC1D8BQ0IIM8 1120 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 PDLIM2Q96JY6 352 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 SERTAD1Q9UHV2 236 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 INO80Q9ULG1 1556 aaPredicted RBP21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 CARMIL3Q8ND23 1372 aa21.67■■□□□ 1.06
PPFIA1-201ENST00000253925 CYP2E1P05181 493 aaPredicted RBP21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 TRAF1Q13077 416 aa21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 PLIN2Q99541 437 aa21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 POLR3EQ9NVU0 708 aa21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 ERBB3P21860 1342 aa21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 OPA1O60313 960 aa21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 ATG3Q9NT62 314 aa21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 BCCIPQ9P287 314 aaKnown RBP eCLIP21.66■■□□□ 1.067e-7■■■■■ 59.6
PPFIA1-201ENST00000253925 TAOK3Q9H2K8 898 aa21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 RASSF4Q9H2L5 321 aa21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 CLIC4Q9Y696 253 aa21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 CAPZA3Q96KX2 299 aa21.66■■□□□ 1.06
PPFIA1-201ENST00000253925 TNNI2P48788 182 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 TTC14Q96N46 770 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 CCDC87Q9NVE4 849 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 RESTQ13127 1097 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 DYDC1Q8WWB3 177 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 NCAPD2Q15021 1401 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 ETF1P62495 437 aaKnown RBP21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 TRIML1Q8N9V2 468 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 GOPCQ9HD26 462 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 VPS18Q9P253 973 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 PTPRMP28827 1452 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 PARP1P09874 1014 aaKnown RBP21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 SSR1P43307 286 aaKnown RBP21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 PRPF4BQ13523 1007 aaKnown RBP21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 SLC39A14Q15043 492 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 LETM2Q2VYF4 491 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 KRBA2Q6ZNG9 492 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 PUS3Q9BZE2 481 aaKnown RBP21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 TSGA10Q9BZW7 698 aa21.65■■□□□ 1.06
PPFIA1-201ENST00000253925 TRMT44Q8IYL2 757 aaKnown RBP21.64■■□□□ 1.06
PPFIA1-201ENST00000253925 NRBP1Q9UHY1 535 aa21.64■■□□□ 1.06
PPFIA1-201ENST00000253925 SV2BQ7L1I2 683 aa21.64■■□□□ 1.06
PPFIA1-201ENST00000253925 SELENOOQ9BVL4 669 aa21.64■■□□□ 1.06
PPFIA1-201ENST00000253925 ZNF215Q9UL58 517 aaPredicted RBP21.64■■□□□ 1.06
PPFIA1-201ENST00000253925 PPARAQ07869 468 aa21.64■■□□□ 1.05
PPFIA1-201ENST00000253925 CCDC113Q9H0I3 377 aa21.64■■□□□ 1.05
PPFIA1-201ENST00000253925 KRT9P35527 623 aa21.64■■□□□ 1.05
PPFIA1-201ENST00000253925 VPS54Q9P1Q0 977 aa21.64■■□□□ 1.05
PPFIA1-201ENST00000253925 RTCBQ9Y3I0 505 aaKnown RBP21.64■■□□□ 1.05
PPFIA1-201ENST00000253925 PSDA5PKW4 1024 aaPredicted RBP21.63■■□□□ 1.05
PPFIA1-201ENST00000253925 SYCP3Q8IZU3 236 aa21.63■■□□□ 1.05
PPFIA1-201ENST00000253925 ADGRL3Q9HAR2 1447 aa21.63■■□□□ 1.05
PPFIA1-201ENST00000253925 PDE4DQ08499 809 aa21.63■■□□□ 1.05
PPFIA1-201ENST00000253925 NOC4LQ9BVI4 516 aaKnown RBP21.63■■□□□ 1.05
PPFIA1-201ENST00000253925 MED23Q9ULK4 1368 aa21.63■■□□□ 1.05
PPFIA1-201ENST00000253925 WDHD1O75717 1129 aaPredicted RBP21.63■■□□□ 1.05
PPFIA1-201ENST00000253925 GCOM1H8Y6P7 765 aaPredicted RBP21.63■■□□□ 1.05
PPFIA1-201ENST00000253925 MYZAPP0CAP1 466 aa21.63■■□□□ 1.05
PPFIA1-201ENST00000253925 FANCBQ8NB91 859 aa21.63■■□□□ 1.05
PPFIA1-201ENST00000253925 HSPA2P54652 639 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 PICALMQ13492 652 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 TTC31Q49AM3 519 aaPredicted RBP21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 CSGALNACT2Q8N6G5 542 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 MAPK8IP1Q9UQF2 711 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 ADORA1P30542 326 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 NRXN1Q9ULB1 1477 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 PDE8BO95263 885 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 CACTINQ8WUQ7 758 aaKnown RBP21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 CCDC51Q96ER9 411 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 NUP58Q9BVL2 599 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 CNNM4Q6P4Q7 775 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 LINC00301Q8NCQ3 95 aa21.62■■□□□ 1.05
PPFIA1-201ENST00000253925 BTBD18B2RXH4 712 aa21.61■■□□□ 1.05
PPFIA1-201ENST00000253925 C11orf57Q6ZUT1 292 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms