RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 RAD51AP2Q09MP3 1159 aa21.73■■□□□ 1.07
SNX4-201ENST00000251775 AXDND1Q5T1B0 1012 aaPredicted RBP21.73■■□□□ 1.07
SNX4-201ENST00000251775 IFNL3Q8IZI9 196 aa21.73■■□□□ 1.07
SNX4-201ENST00000251775 TACC3Q9Y6A5 838 aa21.73■■□□□ 1.07
SNX4-201ENST00000251775 PATL2C9JE40 543 aaKnown RBP21.72■■□□□ 1.07
SNX4-201ENST00000251775 TPM1P09493 284 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 ARMT1Q9H993 441 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 VWA3AA6NCI4 1184 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 PFKFB1P16118 471 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 UBASH3AP57075 661 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 GOLGA8FQ08AF8 430 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 GOLGA8DPQ0D2H9 430 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 MAP3K12Q12852 859 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 ITPK1Q13572 414 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 SMARCE1Q969G3 411 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 TMEM87BQ96K49 555 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 ALG1Q9BT22 464 aa21.72■■□□□ 1.07
SNX4-201ENST00000251775 CTDSPL2Q05D32 466 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 DDB1Q16531 1140 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 CC2D1AQ6P1N0 951 aaPredicted RBP21.71■■□□□ 1.07
SNX4-201ENST00000251775 MICU3Q86XE3 530 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 TXLNBQ8N3L3 684 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 ZCCHC17Q9NP64 241 aaKnown RBP21.71■■□□□ 1.07
SNX4-201ENST00000251775 MROH7-TTC4A0A0A0MT08 1334 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 OAS2P29728 719 aaKnown RBP21.71■■□□□ 1.07
SNX4-201ENST00000251775 SIK1P57059 783 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 SYNE3Q6ZMZ3 975 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 PHKBQ93100 1093 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 LY9Q9HBG7 655 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 AHDC1Q5TGY3 1603 aaPredicted RBP21.71■■□□□ 1.07
SNX4-201ENST00000251775 RREB1Q92766 1687 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 SPATA31A1Q5TZJ5 1347 aa21.71■■□□□ 1.07
SNX4-201ENST00000251775 CMA1P23946 247 aa21.7■■□□□ 1.06
SNX4-201ENST00000251775 BCAMP50895 628 aa21.7■■□□□ 1.06
SNX4-201ENST00000251775 ANO1Q5XXA6 986 aa21.7■■□□□ 1.06
SNX4-201ENST00000251775 FCHSD1Q86WN1 690 aa21.7■■□□□ 1.06
SNX4-201ENST00000251775 VSTM4Q8IW00 320 aa21.7■■□□□ 1.06
SNX4-201ENST00000251775 NAPBQ9H115 298 aa21.7■■□□□ 1.06
SNX4-201ENST00000251775 TMEM139Q8IV31 216 aa21.7■■□□□ 1.06
SNX4-201ENST00000251775 MARCH10Q8NA82 808 aaPredicted RBP21.7■■□□□ 1.06
SNX4-201ENST00000251775 MYL10Q9BUA6 226 aa21.7■■□□□ 1.06
SNX4-201ENST00000251775 FAM217BQ9NTX9 383 aaPredicted RBP21.7■■□□□ 1.06
SNX4-201ENST00000251775 ZSWIM5Q9P217 1185 aa21.7■■□□□ 1.06
SNX4-201ENST00000251775 FEZ2Q9UHY8 353 aaPredicted RBP21.7■■□□□ 1.06
SNX4-201ENST00000251775 TUBE1Q9UJT0 475 aa21.7■■□□□ 1.06
SNX4-201ENST00000251775 GSG1L2A8MUP6 293 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 CBFA2T2O43439 604 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 PRKAB2O43741 272 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 ADAMTS2O95450 1211 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 NTSR2O95665 410 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 SERPINC1P01008 464 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 NTRK3Q16288 839 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 MUM1L1Q5H9M0 696 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 COL4A1P02462 1669 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 TMEM232C9JQI7 657 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 ZBTB43O43298 467 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 ZSCAN12O43309 604 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 WDHD1O75717 1129 aaPredicted RBP21.69■■□□□ 1.06
SNX4-201ENST00000251775 PTPN21Q16825 1174 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 CFAP100Q494V2 611 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 CCDC152Q4G0S7 254 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 PARP10Q53GL7 1025 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 TMEM67Q5HYA8 995 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 KRT40Q6A162 431 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 CDCA7Q9BWT1 371 aaPredicted RBP21.69■■□□□ 1.06
SNX4-201ENST00000251775 TSPYL1Q9H0U9 437 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 TAOK2Q9UL54 1235 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 NIP7Q9Y221 180 aaKnown RBP eCLIP21.69■■□□□ 1.06
SNX4-201ENST00000251775 PPP2R2CQ9Y2T4 447 aa21.69■■□□□ 1.06
SNX4-201ENST00000251775 NRAPQ86VF7 1730 aa21.68■■□□□ 1.06
SNX4-201ENST00000251775 CDKL5O76039 1030 aa21.68■■□□□ 1.06
SNX4-201ENST00000251775 MAP3K9P80192 1104 aa21.68■■□□□ 1.06
SNX4-201ENST00000251775 MYL5Q02045 173 aa21.68■■□□□ 1.06
SNX4-201ENST00000251775 SMC1AQ14683 1233 aaKnown RBP21.68■■□□□ 1.06
SNX4-201ENST00000251775 NFXL1Q6ZNB6 911 aa21.68■■□□□ 1.06
SNX4-201ENST00000251775 SGMS1Q86VZ5 419 aa21.68■■□□□ 1.06
SNX4-201ENST00000251775 FAM177A1Q8N128 213 aaPredicted RBP21.68■■□□□ 1.06
SNX4-201ENST00000251775 GPR161Q8N6U8 529 aaKnown RBP21.68■■□□□ 1.06
SNX4-201ENST00000251775 RGS22Q8NE09 1264 aa21.68■■□□□ 1.06
SNX4-201ENST00000251775 LAMB2P55268 1798 aa21.68■■□□□ 1.06
SNX4-201ENST00000251775 RANBP6O60518 1105 aaKnown RBP21.68■■□□□ 1.06
SNX4-201ENST00000251775 LCORLQ8N3X6 602 aa21.68■■□□□ 1.06
SNX4-201ENST00000251775 IGHMBP2P38935 993 aaKnown RBP21.67■■□□□ 1.06
SNX4-201ENST00000251775 VPS37DQ86XT2 251 aa21.67■■□□□ 1.06
SNX4-201ENST00000251775 WDR24Q96S15 920 aa21.67■■□□□ 1.06
SNX4-201ENST00000251775 BCORQ6W2J9 1755 aa21.67■■□□□ 1.06
SNX4-201ENST00000251775 TIAM2Q8IVF5 1701 aa21.67■■□□□ 1.06
SNX4-201ENST00000251775 ARHGAP6O43182 974 aa21.67■■□□□ 1.06
SNX4-201ENST00000251775 TOP1P11387 765 aaKnown RBP21.67■■□□□ 1.06
SNX4-201ENST00000251775 RSRC2Q7L4I2 434 aaKnown RBP21.67■■□□□ 1.06
SNX4-201ENST00000251775 GOLGA8AA7E2F4 631 aa21.66■■□□□ 1.06
SNX4-201ENST00000251775 UBE2Q2LH0YL09 131 aa21.66■■□□□ 1.06
SNX4-201ENST00000251775 CPLX2Q6PUV4 134 aaKnown RBP21.66■■□□□ 1.06
SNX4-201ENST00000251775 KRBA2Q6ZNG9 492 aa21.66■■□□□ 1.06
SNX4-201ENST00000251775 CCDC34Q96HJ3 373 aa21.66■■□□□ 1.06
SNX4-201ENST00000251775 RTL9Q8NET4 1388 aa21.66■■□□□ 1.06
SNX4-201ENST00000251775 IFIT3O14879 490 aaKnown RBP21.66■■□□□ 1.06
SNX4-201ENST00000251775 MARCKSP29966 332 aaPredicted RBP21.66■■□□□ 1.06
SNX4-201ENST00000251775 IARSP41252 1262 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms