RNA–Protein interactions for RNA: ENST00000251607.10

TRNT1-201, Transcript of tRNA nucleotidyl transferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRNT1, Length 2,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNT1-201ENST00000251607 SNX21Q969T3 373 aa18.37■□□□□ 0.53
TRNT1-201ENST00000251607 EXOSC10Q01780 885 aaKnown RBP18.37■□□□□ 0.53
TRNT1-201ENST00000251607 CDAN1Q8IWY9 1227 aa18.37■□□□□ 0.53
TRNT1-201ENST00000251607 ZSWIM5Q9P217 1185 aa18.37■□□□□ 0.53
TRNT1-201ENST00000251607 TOB2Q14106 344 aaPredicted RBP18.36■□□□□ 0.53
TRNT1-201ENST00000251607 KIF4BQ2VIQ3 1234 aa18.36■□□□□ 0.53
TRNT1-201ENST00000251607 Q6ZUG5 572 aa18.36■□□□□ 0.53
TRNT1-201ENST00000251607 ZKSCAN3Q9BRR0 538 aa18.36■□□□□ 0.53
TRNT1-201ENST00000251607 FAM196BA6NMK8 535 aa18.35■□□□□ 0.53
TRNT1-201ENST00000251607 ZSCAN29Q8IWY8 852 aaPredicted RBP18.35■□□□□ 0.53
TRNT1-201ENST00000251607 AMOTL1Q8IY63 956 aa18.35■□□□□ 0.53
TRNT1-201ENST00000251607 H7C1D1 291 aa18.35■□□□□ 0.53
TRNT1-201ENST00000251607 PRC1O43663 620 aa18.35■□□□□ 0.53
TRNT1-201ENST00000251607 RANBP6O60518 1105 aaKnown RBP18.35■□□□□ 0.53
TRNT1-201ENST00000251607 FAM47AQ5JRC9 791 aa18.35■□□□□ 0.53
TRNT1-201ENST00000251607 TMOD2Q9NZR1 351 aa18.35■□□□□ 0.53
TRNT1-201ENST00000251607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRNT1-201ENST00000251607 SIPA1L1O43166 1804 aa18.35■□□□□ 0.53
TRNT1-201ENST00000251607 CNTNAP1P78357 1384 aa18.34■□□□□ 0.53
TRNT1-201ENST00000251607 LARGE1O95461 756 aa18.34■□□□□ 0.53
TRNT1-201ENST00000251607 HMGB1P09429 215 aaKnown RBP18.34■□□□□ 0.53
TRNT1-201ENST00000251607 MCM5P33992 734 aa18.34■□□□□ 0.53
TRNT1-201ENST00000251607 RNF41Q9H4P4 317 aaPredicted RBP18.34■□□□□ 0.53
TRNT1-201ENST00000251607 K7ELQ4 463 aaPredicted RBP18.34■□□□□ 0.53
TRNT1-201ENST00000251607 MYO1BO43795 1136 aa18.34■□□□□ 0.53
TRNT1-201ENST00000251607 DTNBO60941 627 aa18.34■□□□□ 0.53
TRNT1-201ENST00000251607 HIRAP54198 1017 aaPredicted RBP18.34■□□□□ 0.53
TRNT1-201ENST00000251607 BECN1Q14457 450 aa18.34■□□□□ 0.53
TRNT1-201ENST00000251607 BRF1Q92994 677 aa18.34■□□□□ 0.53
TRNT1-201ENST00000251607 TMEM39BQ9GZU3 492 aa18.34■□□□□ 0.53
TRNT1-201ENST00000251607 SENP2Q9HC62 589 aa18.34■□□□□ 0.53
TRNT1-201ENST00000251607 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
TRNT1-201ENST00000251607 ROBO3Q96MS0 1386 aa18.33■□□□□ 0.53
TRNT1-201ENST00000251607 FGRP09769 529 aa18.33■□□□□ 0.53
TRNT1-201ENST00000251607 FGD1P98174 961 aa18.33■□□□□ 0.53
TRNT1-201ENST00000251607 CNNM2Q9H8M5 875 aa18.33■□□□□ 0.53
TRNT1-201ENST00000251607 POLR2AP24928 1970 aaKnown RBP18.33■□□□□ 0.52
TRNT1-201ENST00000251607 NMT2O60551 498 aa18.33■□□□□ 0.52
TRNT1-201ENST00000251607 PDE4BQ07343 736 aa18.33■□□□□ 0.52
TRNT1-201ENST00000251607 TMX3Q96JJ7 454 aa18.33■□□□□ 0.52
TRNT1-201ENST00000251607 KRT23Q9C075 422 aa18.33■□□□□ 0.52
TRNT1-201ENST00000251607 HACL1Q9UJ83 578 aa18.33■□□□□ 0.52
TRNT1-201ENST00000251607 TPCN1Q9ULQ1 816 aa18.33■□□□□ 0.52
TRNT1-201ENST00000251607 SLC3A2P08195 630 aaKnown RBP18.32■□□□□ 0.52
TRNT1-201ENST00000251607 CDK8P49336 464 aa18.32■□□□□ 0.52
TRNT1-201ENST00000251607 DPY19L2Q6NUT2 758 aa18.32■□□□□ 0.52
TRNT1-201ENST00000251607 C16orf86Q6ZW13 317 aa18.32■□□□□ 0.52
TRNT1-201ENST00000251607 TTC6Q86TZ1 520 aa18.32■□□□□ 0.52
TRNT1-201ENST00000251607 DNAJC18Q9H819 358 aa18.32■□□□□ 0.52
TRNT1-201ENST00000251607 MKNK2Q9HBH9 465 aa18.32■□□□□ 0.52
TRNT1-201ENST00000251607 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
TRNT1-201ENST00000251607 SERPINB13Q9UIV8 391 aa18.32■□□□□ 0.52
TRNT1-201ENST00000251607 MYH8P13535 1937 aa18.32■□□□□ 0.52
TRNT1-201ENST00000251607 ENTPD3O75355 529 aa18.31■□□□□ 0.52
TRNT1-201ENST00000251607 GABPAQ06546 454 aa18.31■□□□□ 0.52
TRNT1-201ENST00000251607 ESR2Q92731 530 aa18.31■□□□□ 0.52
TRNT1-201ENST00000251607 CSRNP1Q96S65 589 aa18.31■□□□□ 0.52
TRNT1-201ENST00000251607 ORC4O43929 436 aa18.3■□□□□ 0.52
TRNT1-201ENST00000251607 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
TRNT1-201ENST00000251607 RASA1P20936 1047 aa18.3■□□□□ 0.52
TRNT1-201ENST00000251607 LMOD1P29536 600 aaPredicted RBP18.3■□□□□ 0.52
TRNT1-201ENST00000251607 ANGEL2Q5VTE6 544 aaKnown RBP18.3■□□□□ 0.52
TRNT1-201ENST00000251607 RAB11FIP4Q86YS3 637 aa18.3■□□□□ 0.52
TRNT1-201ENST00000251607 GLTPD2A6NH11 291 aa18.3■□□□□ 0.52
TRNT1-201ENST00000251607 HLA-DOAP06340 250 aa18.3■□□□□ 0.52
TRNT1-201ENST00000251607 STK3Q13188 491 aa18.3■□□□□ 0.52
TRNT1-201ENST00000251607 ME3Q16798 604 aa18.3■□□□□ 0.52
TRNT1-201ENST00000251607 IGDCC4Q8TDY8 1250 aa18.3■□□□□ 0.52
TRNT1-201ENST00000251607 DHX36Q9H2U1 1008 aaKnown RBP18.3■□□□□ 0.52
TRNT1-201ENST00000251607 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
TRNT1-201ENST00000251607 LIMCH1Q9UPQ0 1083 aa18.3■□□□□ 0.52
TRNT1-201ENST00000251607 TSPY2A6NKD2 308 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 MMP14P50281 582 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 TFAP4Q01664 338 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 RASA3Q14644 834 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 SHROOM1Q2M3G4 852 aaPredicted RBP18.29■□□□□ 0.52
TRNT1-201ENST00000251607 ATRNL1Q5VV63 1379 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 NECAB1Q8N987 351 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 FAM151AQ8WW52 585 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 AGXT2Q9BYV1 514 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 GGA3Q9NZ52 723 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 PI4KBQ9UBF8 816 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 IFIT3O14879 490 aaKnown RBP18.29■□□□□ 0.52
TRNT1-201ENST00000251607 PRAMEF18Q5VWM3 479 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 ALDH8A1Q9H2A2 487 aaPredicted RBP18.29■□□□□ 0.52
TRNT1-201ENST00000251607 BRPF3Q9ULD4 1205 aa18.29■□□□□ 0.52
TRNT1-201ENST00000251607 NAP1L2Q9ULW6 460 aaPredicted RBP18.29■□□□□ 0.52
TRNT1-201ENST00000251607 SH2B2O14492 632 aaPredicted RBP18.28■□□□□ 0.52
TRNT1-201ENST00000251607 SHMT1P34896 483 aa18.28■□□□□ 0.52
TRNT1-201ENST00000251607 TMEM67Q5HYA8 995 aa18.28■□□□□ 0.52
TRNT1-201ENST00000251607 CRACR2BQ8N4Y2 399 aaPredicted RBP18.28■□□□□ 0.52
TRNT1-201ENST00000251607 TNKSO95271 1327 aa18.28■□□□□ 0.52
TRNT1-201ENST00000251607 PCP11498 1178 aaKnown RBP18.28■□□□□ 0.52
TRNT1-201ENST00000251607 MCM2P49736 904 aa18.28■□□□□ 0.52
TRNT1-201ENST00000251607 ST3GAL1Q11201 340 aa18.28■□□□□ 0.52
TRNT1-201ENST00000251607 FKBP1CQ5VVH2 108 aa18.28■□□□□ 0.52
TRNT1-201ENST00000251607 DLK2Q6UY11 383 aa18.28■□□□□ 0.52
TRNT1-201ENST00000251607 MIGA2Q7L4E1 593 aa18.28■□□□□ 0.52
TRNT1-201ENST00000251607 ZNF444Q8N0Y2 327 aaPredicted RBP18.28■□□□□ 0.52
TRNT1-201ENST00000251607 L3MBTL3Q96JM7 780 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms