RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MAPKAPK5Q8IW41 473 aa15.3■□□□□ 0.04
LSM8-201ENST00000249299 AGXT2Q9BYV1 514 aa15.3■□□□□ 0.04
LSM8-201ENST00000249299 NBPF3Q9H094 633 aa15.3■□□□□ 0.04
LSM8-201ENST00000249299 SWAP70Q9UH65 585 aa15.3■□□□□ 0.04
LSM8-201ENST00000249299 MINDY4BA8MYZ0 360 aa15.29■□□□□ 0.04
LSM8-201ENST00000249299 HLA-DOAP06340 250 aa15.29■□□□□ 0.04
LSM8-201ENST00000249299 HAND2P61296 217 aa15.29■□□□□ 0.04
LSM8-201ENST00000249299 EXOSC10Q01780 885 aaKnown RBP15.29■□□□□ 0.04
LSM8-201ENST00000249299 METTL16Q86W50 562 aaKnown RBP15.29■□□□□ 0.04
LSM8-201ENST00000249299 TBC1D10CQ8IV04 446 aa15.29■□□□□ 0.04
LSM8-201ENST00000249299 FOXP4Q8IVH2 680 aaPredicted RBP15.29■□□□□ 0.04
LSM8-201ENST00000249299 HSCBQ8IWL3 235 aa15.29■□□□□ 0.04
LSM8-201ENST00000249299 MB21D2Q8IYB1 491 aaPredicted RBP15.29■□□□□ 0.04
LSM8-201ENST00000249299 FAM151AQ8WW52 585 aa15.29■□□□□ 0.04
LSM8-201ENST00000249299 ESR2Q92731 530 aa15.29■□□□□ 0.04
LSM8-201ENST00000249299 IPO9Q96P70 1041 aaKnown RBP15.29■□□□□ 0.04
LSM8-201ENST00000249299 TDRD3Q9H7E2 651 aaKnown RBP15.29■□□□□ 0.04
LSM8-201ENST00000249299 PDRG1Q9NUG6 133 aa15.29■□□□□ 0.04
LSM8-201ENST00000249299 ZNF70Q9UC06 446 aaPredicted RBP15.29■□□□□ 0.04
LSM8-201ENST00000249299 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.29■□□□□ 0.04
LSM8-201ENST00000249299 SBF1O95248 1867 aa15.29■□□□□ 0.04
LSM8-201ENST00000249299 LMOD1P29536 600 aaPredicted RBP15.28■□□□□ 0.04
LSM8-201ENST00000249299 TNNI2P48788 182 aa15.28■□□□□ 0.04
LSM8-201ENST00000249299 CCDC178Q5BJE1 867 aa15.28■□□□□ 0.04
LSM8-201ENST00000249299 CHMP4CQ96CF2 233 aa15.28■□□□□ 0.04
LSM8-201ENST00000249299 TMEM87BQ96K49 555 aa15.28■□□□□ 0.04
LSM8-201ENST00000249299 ZSCAN31Q96LW9 406 aaPredicted RBP15.28■□□□□ 0.04
LSM8-201ENST00000249299 UPF3BQ9BZI7 483 aaKnown RBP15.28■□□□□ 0.04
LSM8-201ENST00000249299 DDX4Q9NQI0 724 aaKnown RBP15.28■□□□□ 0.04
LSM8-201ENST00000249299 PI4KBQ9UBF8 816 aa15.28■□□□□ 0.04
LSM8-201ENST00000249299 FAM198AQ9UFP1 575 aa15.28■□□□□ 0.04
LSM8-201ENST00000249299 TAF6LQ9Y6J9 622 aa15.28■□□□□ 0.04
LSM8-201ENST00000249299 TIAM2Q8IVF5 1701 aa15.28■□□□□ 0.04
LSM8-201ENST00000249299 GLTPD2A6NH11 291 aa15.27■□□□□ 0.04
LSM8-201ENST00000249299 GABPAQ06546 454 aa15.27■□□□□ 0.04
LSM8-201ENST00000249299 SART3Q15020 963 aaKnown RBP15.27■□□□□ 0.04
LSM8-201ENST00000249299 KIF4BQ2VIQ3 1234 aa15.27■□□□□ 0.04
LSM8-201ENST00000249299 C16orf86Q6ZW13 317 aa15.27■□□□□ 0.04
LSM8-201ENST00000249299 TMTC2Q8N394 836 aa15.27■□□□□ 0.04
LSM8-201ENST00000249299 ADARB2Q9NS39 739 aaKnown RBP15.27■□□□□ 0.04
LSM8-201ENST00000249299 K7ELQ4 463 aaPredicted RBP15.26■□□□□ 0.03
LSM8-201ENST00000249299 LIFRP42702 1097 aa15.26■□□□□ 0.03
LSM8-201ENST00000249299 EVCP57679 992 aa15.26■□□□□ 0.03
LSM8-201ENST00000249299 CTDSPL2Q05D32 466 aa15.26■□□□□ 0.03
LSM8-201ENST00000249299 NFIAQ12857 509 aa15.26■□□□□ 0.03
LSM8-201ENST00000249299 TBC1D2Q9BYX2 928 aa15.26■□□□□ 0.03
LSM8-201ENST00000249299 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
LSM8-201ENST00000249299 SH2B1Q9NRF2 756 aaPredicted RBP15.26■□□□□ 0.03
LSM8-201ENST00000249299 DAXXQ9UER7 740 aaPredicted RBP15.26■□□□□ 0.03
LSM8-201ENST00000249299 SERPINB13Q9UIV8 391 aa15.26■□□□□ 0.03
LSM8-201ENST00000249299 LIMCH1Q9UPQ0 1083 aa15.26■□□□□ 0.03
LSM8-201ENST00000249299 LAMA4Q16363 1823 aa15.26■□□□□ 0.03
LSM8-201ENST00000249299 PITPNM2Q9BZ72 1349 aa15.26■□□□□ 0.03
LSM8-201ENST00000249299 IQCA1LA6NCM1 817 aa15.25■□□□□ 0.03
LSM8-201ENST00000249299 DDNO94850 711 aaPredicted RBP15.25■□□□□ 0.03
LSM8-201ENST00000249299 CD44P16070 742 aaKnown RBP15.25■□□□□ 0.03
LSM8-201ENST00000249299 PLCD1P51178 756 aa15.25■□□□□ 0.03
LSM8-201ENST00000249299 PICALMQ13492 652 aa15.25■□□□□ 0.03
LSM8-201ENST00000249299 PPP4R3BQ5MIZ7 849 aa15.25■□□□□ 0.03
LSM8-201ENST00000249299 IQCA1Q86XH1 822 aa15.25■□□□□ 0.03
LSM8-201ENST00000249299 APOBEC3FQ8IUX4 373 aaKnown RBP15.25■□□□□ 0.03
LSM8-201ENST00000249299 ZC3H15Q8WU90 426 aaKnown RBP15.25■□□□□ 0.03
LSM8-201ENST00000249299 HOOK2Q96ED9 719 aa15.25■□□□□ 0.03
LSM8-201ENST00000249299 CCDC17Q96LX7 622 aa15.25■□□□□ 0.03
LSM8-201ENST00000249299 TCP11L1Q9NUJ3 509 aa15.25■□□□□ 0.03
LSM8-201ENST00000249299 HERC5Q9UII4 1024 aaKnown RBP15.25■□□□□ 0.03
LSM8-201ENST00000249299 PCDHAC2Q9Y5I4 1007 aa15.25■□□□□ 0.03
LSM8-201ENST00000249299 PPP2R3BQ9Y5P8 575 aa15.25■□□□□ 0.03
LSM8-201ENST00000249299 PRC1O43663 620 aa15.24■□□□□ 0.03
LSM8-201ENST00000249299 TBC1D12O60347 775 aa15.24■□□□□ 0.03
LSM8-201ENST00000249299 NBPF9Q3BBW0 867 aa15.24■□□□□ 0.03
LSM8-201ENST00000249299 USP50Q70EL3 339 aaPredicted RBP15.24■□□□□ 0.03
LSM8-201ENST00000249299 ZNF444Q8N0Y2 327 aaPredicted RBP15.24■□□□□ 0.03
LSM8-201ENST00000249299 MKNK2Q9HBH9 465 aa15.24■□□□□ 0.03
LSM8-201ENST00000249299 RTN4Q9NQC3 1192 aaKnown RBP15.24■□□□□ 0.03
LSM8-201ENST00000249299 ZSWIM5Q9P217 1185 aa15.24■□□□□ 0.03
LSM8-201ENST00000249299 SAP30BPQ9UHR5 308 aaKnown RBP15.24■□□□□ 0.03
LSM8-201ENST00000249299 NEDD4P46934 1319 aa15.24■□□□□ 0.03
LSM8-201ENST00000249299 DDX60LQ5H9U9 1706 aaKnown RBP15.23■□□□□ 0.03
LSM8-201ENST00000249299 FOCADQ5VW36 1801 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 CYP2D7A0A087X1C5 515 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 B4E1Z4 1266 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 KDM4AO75164 1064 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 CYP2D6P10635 497 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 CDK8P49336 464 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 RCAN1P53805 252 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 AK2P54819 239 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 MAP3K10Q02779 954 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 SAMD7Q7Z3H4 446 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 SGMS1Q86VZ5 419 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 HACL1Q9UJ83 578 aa15.23■□□□□ 0.03
LSM8-201ENST00000249299 ANGEL1Q9UNK9 670 aaKnown RBP15.23■□□□□ 0.03
LSM8-201ENST00000249299 ERICH2A1L162 156 aa15.22■□□□□ 0.03
LSM8-201ENST00000249299 EPS15P42566 896 aa15.22■□□□□ 0.03
LSM8-201ENST00000249299 ANTXR2P58335 489 aa15.22■□□□□ 0.03
LSM8-201ENST00000249299 FGD1P98174 961 aa15.22■□□□□ 0.03
LSM8-201ENST00000249299 TBC1D10BQ4KMP7 808 aaPredicted RBP15.22■□□□□ 0.03
LSM8-201ENST00000249299 IGDCC4Q8TDY8 1250 aa15.22■□□□□ 0.03
LSM8-201ENST00000249299 ANKS1AQ92625 1134 aa15.22■□□□□ 0.03
LSM8-201ENST00000249299 ZNF274Q96GC6 653 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms