RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 SGMS1Q86VZ5 419 aa21.02■□□□□ 0.95
KLHDC3-201ENST00000244670 KLHL34Q8N239 644 aa21.02■□□□□ 0.95
KLHDC3-201ENST00000244670 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.02■□□□□ 0.956e-6■■■■■ 34.1
KLHDC3-201ENST00000244670 SLC3A2P08195 630 aaKnown RBP21.01■□□□□ 0.95
KLHDC3-201ENST00000244670 FGRP09769 529 aa21.01■□□□□ 0.95
KLHDC3-201ENST00000244670 PLCG2P16885 1265 aa21.01■□□□□ 0.95
KLHDC3-201ENST00000244670 C12orf60Q5U649 245 aa21.01■□□□□ 0.95
KLHDC3-201ENST00000244670 CERS3Q8IU89 383 aa21.01■□□□□ 0.95
KLHDC3-201ENST00000244670 DYNLL2Q96FJ2 89 aa21.01■□□□□ 0.95
KLHDC3-201ENST00000244670 TNKSO95271 1327 aa21.01■□□□□ 0.95
KLHDC3-201ENST00000244670 MYH1P12882 1939 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 GOLGA6L3A6NEY3 463 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 CPLX1O14810 134 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 ZBTB43O43298 467 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 HMGN5P82970 282 aaKnown RBP21■□□□□ 0.95
KLHDC3-201ENST00000244670 STRIP1Q5VSL9 837 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 FERMT3Q86UX7 667 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 KIAA0825Q8IV33 1275 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 CNPY2Q9Y2B0 182 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 SLC12A7Q9Y666 1083 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 FLT1P17948 1338 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 POLR3DP05423 398 aaPredicted RBP21■□□□□ 0.95
KLHDC3-201ENST00000244670 PDE4BQ07343 736 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 FAM47AQ5JRC9 791 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 DACT2Q5SW24 774 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 AMOTL1Q8IY63 956 aa21■□□□□ 0.95
KLHDC3-201ENST00000244670 FOCADQ5VW36 1801 aa20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 DDX60LQ5H9U9 1706 aaKnown RBP20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 USP17L3A6NCW0 530 aa20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 USP17L4A6NCW7 530 aa20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 GOLGA8AA7E2F4 631 aa20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 ORC4O43929 436 aa20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 PCP11498 1178 aaKnown RBP20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 NCLP19338 710 aaKnown RBP20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 ADD1P35611 737 aaKnown RBP20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 PLCD1P51178 756 aa20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 USP17L1Q7RTZ2 530 aa20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 RTKN2Q8IZC4 609 aa20.99■□□□□ 0.95
KLHDC3-201ENST00000244670 YDJCA8MPS7 323 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 DHX16O60231 1041 aaKnown RBP20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 CDC27P30260 824 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 PICALMQ13492 652 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 CAVIN1Q6NZI2 390 aaKnown RBP20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 CHMP4CQ96CF2 233 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 ZSCAN10Q96SZ4 725 aaPredicted RBP20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 ZNF277Q9NRM2 450 aaPredicted RBP20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 PIM2Q9P1W9 311 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 H3BQV1 296 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 FDPSP14324 419 aaKnown RBP20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 TGFB2P61812 414 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 IFFO2Q5TF58 517 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 USP48Q86UV5 1035 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 TMEM87AQ8NBN3 555 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 TEKT1Q969V4 418 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 ATP6V1DQ9Y5K8 247 aa20.98■□□□□ 0.95
KLHDC3-201ENST00000244670 MYH15Q9Y2K3 1946 aa20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 NMT2O60551 498 aa20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 GADD45BO75293 160 aaPredicted RBP20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 PDIA4P13667 645 aaKnown RBP20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 SEC23AQ15436 765 aa20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 SYNE3Q6ZMZ3 975 aa20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 ENAHQ8N8S7 591 aaPredicted RBP20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 SLC44A5Q8NCS7 719 aa20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 PSMD1Q99460 953 aa20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 MTA3Q9BTC8 594 aa20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 RBM27Q9P2N5 1060 aaKnown RBP20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 PCDHAC2Q9Y5I4 1007 aa20.97■□□□□ 0.95
KLHDC3-201ENST00000244670 CRKP46108 304 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 IQCA1Q86XH1 822 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 USP40Q9NVE5 1235 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 ROBO3Q96MS0 1386 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 TSPY2A6NKD2 308 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 DNM1Q05193 864 aaKnown RBP20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 GRIPAP1Q4V328 841 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 HHIPL2Q6UWX4 724 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 GAS2L3Q86XJ1 694 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 LARGE2Q8N3Y3 721 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 NUP133Q8WUM0 1156 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 KIF3AQ9Y496 699 aa20.96■□□□□ 0.95
KLHDC3-201ENST00000244670 COL4A5P29400 1685 aa20.95■□□□□ 0.94
KLHDC3-201ENST00000244670 BRCA1P38398 1863 aaKnown RBP20.95■□□□□ 0.94
KLHDC3-201ENST00000244670 APOBEC3HQ6NTF7 200 aaKnown RBP20.95■□□□□ 0.94
KLHDC3-201ENST00000244670 FAM173BQ6P4H8 233 aa20.95■□□□□ 0.94
KLHDC3-201ENST00000244670 ZNF654Q8IZM8 581 aa20.95■□□□□ 0.94
KLHDC3-201ENST00000244670 MKNK2Q9HBH9 465 aa20.95■□□□□ 0.94
KLHDC3-201ENST00000244670 FAM217BQ9NTX9 383 aaPredicted RBP20.95■□□□□ 0.94
KLHDC3-201ENST00000244670 ORC3Q9UBD5 711 aaPredicted RBP20.95■□□□□ 0.94
KLHDC3-201ENST00000244670 ECM29Q5VYK3 1845 aa20.95■□□□□ 0.94
KLHDC3-201ENST00000244670 MBD3O95983 291 aa20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 RBM5P52756 815 aaKnown RBP eCLIP20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 FKBP1AP62942 108 aaKnown RBP20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 GUCY1B3Q02153 619 aa20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 DALRD3Q5D0E6 543 aaKnown RBP20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 IFIT1BQ5T764 474 aaKnown RBP20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 CDC42EP5Q6NZY7 148 aa20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 TMTC2Q8N394 836 aa20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 PHKBQ93100 1093 aa20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 DDX4Q9NQI0 724 aaKnown RBP20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 WDHD1O75717 1129 aaPredicted RBP20.94■□□□□ 0.94
KLHDC3-201ENST00000244670 SGIP1Q9BQI5 828 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms