RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 SRCIN1Q9C0H9 1055 aa10.47□□□□□ -0.73
IFT43-201ENST00000238628 ATP11BQ9Y2G3 1177 aa10.47□□□□□ -0.73
IFT43-201ENST00000238628 A0A0G2JLL6 359 aaPredicted RBP10.46□□□□□ -0.73
IFT43-201ENST00000238628 BMP1P13497 986 aa10.46□□□□□ -0.73
IFT43-201ENST00000238628 METTL24Q5JXM2 366 aa10.46□□□□□ -0.73
IFT43-201ENST00000238628 NOL9Q5SY16 702 aaKnown RBP10.46□□□□□ -0.73
IFT43-201ENST00000238628 FKBP1CQ5VVH2 108 aa10.46□□□□□ -0.73
IFT43-201ENST00000238628 LHX8Q68G74 356 aa10.46□□□□□ -0.73
IFT43-201ENST00000238628 APOBEC3HQ6NTF7 200 aaKnown RBP10.46□□□□□ -0.73
IFT43-201ENST00000238628 PRRT2Q7Z6L0 340 aaPredicted RBP10.46□□□□□ -0.73
IFT43-201ENST00000238628 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.73
IFT43-201ENST00000238628 ZNF112Q9UJU3 913 aa10.46□□□□□ -0.73
IFT43-201ENST00000238628 ZHX2Q9Y6X8 837 aa10.46□□□□□ -0.73
IFT43-201ENST00000238628 MAST3O60307 1309 aa10.45□□□□□ -0.74
IFT43-201ENST00000238628 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.45□□□□□ -0.74
IFT43-201ENST00000238628 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.45□□□□□ -0.74
IFT43-201ENST00000238628 FAM86C2PA6NEL3 165 aa10.45□□□□□ -0.74
IFT43-201ENST00000238628 GPR37L1O60883 481 aa10.45□□□□□ -0.74
IFT43-201ENST00000238628 PDE8BO95263 885 aa10.45□□□□□ -0.74
IFT43-201ENST00000238628 NBPF7P0C2Y1 421 aaPredicted RBP10.45□□□□□ -0.74
IFT43-201ENST00000238628 IGFBP4P22692 258 aa10.45□□□□□ -0.74
IFT43-201ENST00000238628 CCND3P30281 292 aaPredicted RBP10.45□□□□□ -0.74
IFT43-201ENST00000238628 CACNB2Q08289 660 aaPredicted RBP10.45□□□□□ -0.74
IFT43-201ENST00000238628 LRRC24Q50LG9 513 aa10.45□□□□□ -0.74
IFT43-201ENST00000238628 HHIPL2Q6UWX4 724 aa10.45□□□□□ -0.74
IFT43-201ENST00000238628 TIFAQ96CG3 184 aa10.45□□□□□ -0.74
IFT43-201ENST00000238628 KAZALD1Q96I82 304 aa10.45□□□□□ -0.74
IFT43-201ENST00000238628 PRDM12Q9H4Q4 367 aa10.45□□□□□ -0.74
IFT43-201ENST00000238628 AAK1Q2M2I8 961 aa10.44□□□□□ -0.74
IFT43-201ENST00000238628 FAM151AQ8WW52 585 aa10.44□□□□□ -0.74
IFT43-201ENST00000238628 PICK1Q9NRD5 415 aa10.44□□□□□ -0.74
IFT43-201ENST00000238628 PNMA3Q9UL41 463 aa10.44□□□□□ -0.74
IFT43-201ENST00000238628 SUGT1Q9Y2Z0 365 aa10.44□□□□□ -0.74
IFT43-201ENST00000238628 MYH13Q9UKX3 1938 aa10.43□□□□□ -0.74
IFT43-201ENST00000238628 LTBP2Q14767 1821 aa10.43□□□□□ -0.74
IFT43-201ENST00000238628 IFIT1P09914 478 aaKnown RBP10.43□□□□□ -0.74
IFT43-201ENST00000238628 ZKSCAN1P17029 563 aaPredicted RBP10.43□□□□□ -0.74
IFT43-201ENST00000238628 TCP10Q12799 353 aa10.43□□□□□ -0.74
IFT43-201ENST00000238628 TRMT44Q8IYL2 757 aaKnown RBP10.43□□□□□ -0.74
IFT43-201ENST00000238628 NUDT12Q9BQG2 462 aa10.43□□□□□ -0.74
IFT43-201ENST00000238628 BICC1Q9H694 974 aaKnown RBP10.43□□□□□ -0.74
IFT43-201ENST00000238628 CXXC1Q9P0U4 656 aaPredicted RBP10.43□□□□□ -0.74
IFT43-201ENST00000238628 AGTPBP1Q9UPW5 1226 aa10.43□□□□□ -0.74
IFT43-201ENST00000238628 AFG3L2Q9Y4W6 797 aa10.43□□□□□ -0.74
IFT43-201ENST00000238628 MAST2Q6P0Q8 1798 aa10.42□□□□□ -0.74
IFT43-201ENST00000238628 RPAP1Q9BWH6 1393 aaPredicted RBP10.42□□□□□ -0.74
IFT43-201ENST00000238628 UTYO14607 1347 aa10.42□□□□□ -0.74
IFT43-201ENST00000238628 SMIM22K7EJ46 135 aa10.42□□□□□ -0.74
IFT43-201ENST00000238628 XRCC5P13010 732 aaKnown RBP10.42□□□□□ -0.74
IFT43-201ENST00000238628 PTPRAP18433 802 aa10.42□□□□□ -0.74
IFT43-201ENST00000238628 ZEB1P37275 1124 aaPredicted RBP10.42□□□□□ -0.74
IFT43-201ENST00000238628 GCLCP48506 637 aaPredicted RBP10.42□□□□□ -0.74
IFT43-201ENST00000238628 RABL6Q3YEC7 729 aaPredicted RBP10.42□□□□□ -0.74
IFT43-201ENST00000238628 VGLL2Q8N8G2 317 aa10.42□□□□□ -0.74
IFT43-201ENST00000238628 KLHDC4Q8TBB5 520 aa10.42□□□□□ -0.74
IFT43-201ENST00000238628 WDR66Q8TBY9 1149 aa10.42□□□□□ -0.74
IFT43-201ENST00000238628 C11orf16Q9NQ32 467 aa10.42□□□□□ -0.74
IFT43-201ENST00000238628 TRIM75PA6NK02 468 aa10.41□□□□□ -0.74
IFT43-201ENST00000238628 KCNQ1P51787 676 aa10.41□□□□□ -0.74
IFT43-201ENST00000238628 TFF2Q03403 129 aa10.41□□□□□ -0.74
IFT43-201ENST00000238628 ADGRE1Q14246 886 aa10.41□□□□□ -0.74
IFT43-201ENST00000238628 CDC42EP5Q6NZY7 148 aa10.41□□□□□ -0.74
IFT43-201ENST00000238628 SLC39A5Q6ZMH5 540 aa10.41□□□□□ -0.74
IFT43-201ENST00000238628 CCDC129Q6ZRS4 1044 aa10.41□□□□□ -0.74
IFT43-201ENST00000238628 SCYL3Q8IZE3 742 aa10.41□□□□□ -0.74
IFT43-201ENST00000238628 ANKRD44Q8N8A2 993 aa10.41□□□□□ -0.74
IFT43-201ENST00000238628 MRS2Q9HD23 443 aa10.41□□□□□ -0.74
IFT43-201ENST00000238628 TRIM43BA6NCK2 446 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 DNM1LO00429 736 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 SLC5A1P13866 664 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 FGFR2P21802 821 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 NHLH1Q02575 133 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 PUM3Q15397 648 aaKnown RBP10.4□□□□□ -0.74
IFT43-201ENST00000238628 SKIV2LQ15477 1246 aaKnown RBP10.4□□□□□ -0.74
IFT43-201ENST00000238628 TRIM60Q495X7 471 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 TREML2Q5T2D2 321 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 SH3RF1Q7Z6J0 888 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 MICALL1Q8N3F8 863 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 SOCS4Q8WXH5 440 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 TRIM43Q96BQ3 446 aaPredicted RBP10.4□□□□□ -0.74
IFT43-201ENST00000238628 PDLIM7Q9NR12 457 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 USP40Q9NVE5 1235 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 DAGLAQ9Y4D2 1042 aa10.4□□□□□ -0.74
IFT43-201ENST00000238628 KIF16BQ96L93 1317 aa10.39□□□□□ -0.75
IFT43-201ENST00000238628 CNGA1P29973 690 aa10.39□□□□□ -0.75
IFT43-201ENST00000238628 EPHB4P54760 987 aa10.39□□□□□ -0.75
IFT43-201ENST00000238628 NFIAQ12857 509 aa10.39□□□□□ -0.75
IFT43-201ENST00000238628 DIXDC1Q155Q3 683 aa10.39□□□□□ -0.75
IFT43-201ENST00000238628 CCL14Q16627 93 aa10.39□□□□□ -0.75
IFT43-201ENST00000238628 LPIN2Q92539 896 aa10.39□□□□□ -0.75
IFT43-201ENST00000238628 LPAR1Q92633 364 aa10.39□□□□□ -0.75
IFT43-201ENST00000238628 UIMC1Q96RL1 719 aa10.39□□□□□ -0.75
IFT43-201ENST00000238628 FAM198AQ9UFP1 575 aa10.39□□□□□ -0.75
IFT43-201ENST00000238628 EYA2O00167 538 aa10.38□□□□□ -0.75
IFT43-201ENST00000238628 LDHBP07195 334 aaKnown RBP10.38□□□□□ -0.75
IFT43-201ENST00000238628 PABPC4Q13310 644 aaKnown RBP eCLIP10.38□□□□□ -0.75
IFT43-201ENST00000238628 GJC2Q5T442 439 aaPredicted RBP10.38□□□□□ -0.75
IFT43-201ENST00000238628 ZFPM1Q8IX07 1006 aa10.38□□□□□ -0.75
IFT43-201ENST00000238628 CCAR1Q8IX12 1150 aaKnown RBP10.38□□□□□ -0.75
IFT43-201ENST00000238628 KHSRPQ92945 711 aaKnown RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms