RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 RANBP6O60518 1105 aaKnown RBP27.84■■■□□ 2.05
RRP9-201ENST00000232888 POLR3DP05423 398 aaPredicted RBP27.84■■■□□ 2.05
RRP9-201ENST00000232888 CYP2D6P10635 497 aa27.84■■■□□ 2.05
RRP9-201ENST00000232888 SEC23AQ15436 765 aa27.84■■■□□ 2.05
RRP9-201ENST00000232888 FOXD4L5Q5VV16 416 aaPredicted RBP27.84■■■□□ 2.05
RRP9-201ENST00000232888 MCTP1Q6DN14 999 aa27.84■■■□□ 2.05
RRP9-201ENST00000232888 FOXD4L4Q8WXT5 416 aaPredicted RBP27.84■■■□□ 2.05
RRP9-201ENST00000232888 ZDHHC15Q96MV8 337 aa27.84■■■□□ 2.05
RRP9-201ENST00000232888 SGIP1Q9BQI5 828 aa27.84■■■□□ 2.05
RRP9-201ENST00000232888 CCDC178Q5BJE1 867 aa27.83■■■□□ 2.05
RRP9-201ENST00000232888 DALRD3Q5D0E6 543 aaKnown RBP27.83■■■□□ 2.05
RRP9-201ENST00000232888 MAPKAPK5Q8IW41 473 aa27.83■■■□□ 2.05
RRP9-201ENST00000232888 STK11IPQ8N1F8 1099 aa27.83■■■□□ 2.05
RRP9-201ENST00000232888 NAV1Q8NEY1 1877 aa27.83■■■□□ 2.05
RRP9-201ENST00000232888 TNKSO95271 1327 aa27.83■■■□□ 2.04
RRP9-201ENST00000232888 MYO3BQ8WXR4 1341 aa27.83■■■□□ 2.04
RRP9-201ENST00000232888 VPS37CA5D8V6 355 aaPredicted RBP27.82■■■□□ 2.04
RRP9-201ENST00000232888 F8W031 263 aaPredicted RBP27.82■■■□□ 2.04
RRP9-201ENST00000232888 CCDC196A0A1B0GTZ2 297 aa27.82■■■□□ 2.04
RRP9-201ENST00000232888 TRAK2O60296 914 aa27.82■■■□□ 2.04
RRP9-201ENST00000232888 CRKP46108 304 aa27.82■■■□□ 2.04
RRP9-201ENST00000232888 DDX11Q96FC9 970 aa27.82■■■□□ 2.04
RRP9-201ENST00000232888 MXD3Q9BW11 206 aa27.82■■■□□ 2.04
RRP9-201ENST00000232888 KCNQ5Q9NR82 932 aa27.82■■■□□ 2.04
RRP9-201ENST00000232888 SERPINA10Q9UK55 444 aa27.82■■■□□ 2.04
RRP9-201ENST00000232888 GOLGA8AA7E2F4 631 aa27.81■■■□□ 2.04
RRP9-201ENST00000232888 SMIM22K7EJ46 135 aa27.81■■■□□ 2.04
RRP9-201ENST00000232888 SENP2Q9HC62 589 aa27.81■■■□□ 2.04
RRP9-201ENST00000232888 APOBEC3HQ6NTF7 200 aaKnown RBP27.8■■■□□ 2.04
RRP9-201ENST00000232888 ZKSCAN3Q9BRR0 538 aa27.8■■■□□ 2.04
RRP9-201ENST00000232888 USP40Q9NVE5 1235 aa27.8■■■□□ 2.04
RRP9-201ENST00000232888 H3BQV1 296 aa27.79■■■□□ 2.04
RRP9-201ENST00000232888 PRDM1O75626 825 aa27.79■■■□□ 2.04
RRP9-201ENST00000232888 SCNN1DP51172 638 aa27.79■■■□□ 2.04
RRP9-201ENST00000232888 IFFO2Q5TF58 517 aa27.79■■■□□ 2.04
RRP9-201ENST00000232888 MICU3Q86XE3 530 aa27.79■■■□□ 2.04
RRP9-201ENST00000232888 LARGE2Q8N3Y3 721 aa27.79■■■□□ 2.04
RRP9-201ENST00000232888 ENAHQ8N8S7 591 aaPredicted RBP27.79■■■□□ 2.04
RRP9-201ENST00000232888 MKNK2Q9HBH9 465 aa27.79■■■□□ 2.04
RRP9-201ENST00000232888 DDX60LQ5H9U9 1706 aaKnown RBP27.79■■■□□ 2.04
RRP9-201ENST00000232888 CALM1P0DP23 149 aa27.78■■■□□ 2.04
RRP9-201ENST00000232888 CALM2P0DP24 149 aa27.78■■■□□ 2.04
RRP9-201ENST00000232888 CALM3P0DP25 149 aa27.78■■■□□ 2.04
RRP9-201ENST00000232888 TTC6Q86TZ1 520 aa27.78■■■□□ 2.04
RRP9-201ENST00000232888 ZSCAN16Q9H4T2 348 aaPredicted RBP27.78■■■□□ 2.04
RRP9-201ENST00000232888 CDK5RAP2Q96SN8 1893 aa27.78■■■□□ 2.04
RRP9-201ENST00000232888 TSPY2A6NKD2 308 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 YDJCA8MPS7 323 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 IFIT1BQ5T764 474 aaKnown RBP27.77■■■□□ 2.04
RRP9-201ENST00000232888 CDC42EP5Q6NZY7 148 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 C16orf86Q6ZW13 317 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 CDC37L1Q7L3B6 337 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 ZNF654Q8IZM8 581 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 TCP11L1Q9NUJ3 509 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 LMBRD1Q9NUN5 540 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 ORC3Q9UBD5 711 aaPredicted RBP27.77■■■□□ 2.04
RRP9-201ENST00000232888 TAOK2Q9UL54 1235 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 ZNF646O15015 1829 aaPredicted RBP27.77■■■□□ 2.04
RRP9-201ENST00000232888 FOCADQ5VW36 1801 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 SCN9AQ15858 1988 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 NPM3O75607 178 aaKnown RBP27.77■■■□□ 2.04
RRP9-201ENST00000232888 WDHD1O75717 1129 aaPredicted RBP27.77■■■□□ 2.04
RRP9-201ENST00000232888 FDPSP14324 419 aaKnown RBP27.77■■■□□ 2.04
RRP9-201ENST00000232888 PLCD1P51178 756 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 CATIPQ7Z7H3 387 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 KIAA0825Q8IV33 1275 aa27.77■■■□□ 2.04
RRP9-201ENST00000232888 ZNF444Q8N0Y2 327 aaPredicted RBP27.77■■■□□ 2.04
RRP9-201ENST00000232888 SAP30BPQ9UHR5 308 aaKnown RBP27.77■■■□□ 2.04
RRP9-201ENST00000232888 RTN1Q16799 776 aa27.76■■■□□ 2.03
RRP9-201ENST00000232888 CSPP1Q1MSJ5 1256 aa27.76■■■□□ 2.03
RRP9-201ENST00000232888 DGKHQ86XP1 1220 aa27.76■■■□□ 2.03
RRP9-201ENST00000232888 ANKS1AQ92625 1134 aa27.76■■■□□ 2.03
RRP9-201ENST00000232888 FAM217BQ9NTX9 383 aaPredicted RBP27.76■■■□□ 2.03
RRP9-201ENST00000232888 DDAH1O94760 285 aa27.75■■■□□ 2.03
RRP9-201ENST00000232888 VIL1P09327 827 aaKnown RBP27.75■■■□□ 2.03
RRP9-201ENST00000232888 ADD1P35611 737 aaKnown RBP27.75■■■□□ 2.03
RRP9-201ENST00000232888 EVX2Q03828 476 aa27.75■■■□□ 2.03
RRP9-201ENST00000232888 FANCBQ8NB91 859 aa27.75■■■□□ 2.03
RRP9-201ENST00000232888 TMEM87AQ8NBN3 555 aa27.75■■■□□ 2.03
RRP9-201ENST00000232888 ZNF277Q9NRM2 450 aaPredicted RBP27.75■■■□□ 2.03
RRP9-201ENST00000232888 STK36Q9NRP7 1315 aa27.75■■■□□ 2.03
RRP9-201ENST00000232888 DTNBO60941 627 aa27.74■■■□□ 2.03
RRP9-201ENST00000232888 IFNAR1P17181 557 aa27.74■■■□□ 2.03
RRP9-201ENST00000232888 CDC27P30260 824 aa27.74■■■□□ 2.03
RRP9-201ENST00000232888 IARSP41252 1262 aaKnown RBP27.74■■■□□ 2.03
RRP9-201ENST00000232888 PTGER2P43116 358 aa27.74■■■□□ 2.03
RRP9-201ENST00000232888 TFAP4Q01664 338 aa27.74■■■□□ 2.03
RRP9-201ENST00000232888 NTRK3Q16288 839 aa27.74■■■□□ 2.03
RRP9-201ENST00000232888 NIM1KQ8IY84 436 aa27.74■■■□□ 2.03
RRP9-201ENST00000232888 DYNLL2Q96FJ2 89 aa27.74■■■□□ 2.03
RRP9-201ENST00000232888 ZNRF3Q9ULT6 936 aa27.74■■■□□ 2.03
RRP9-201ENST00000232888 PSME4Q14997 1843 aa27.74■■■□□ 2.03
RRP9-201ENST00000232888 RSBN1LQ6PCB5 846 aaPredicted RBP27.73■■■□□ 2.03
RRP9-201ENST00000232888 RAB11FIP4Q86YS3 637 aa27.73■■■□□ 2.03
RRP9-201ENST00000232888 PRPF40AO75400 957 aaKnown RBP27.73■■■□□ 2.03
RRP9-201ENST00000232888 CDK8P49336 464 aa27.73■■■□□ 2.03
RRP9-201ENST00000232888 KLHL40Q2TBA0 621 aa27.73■■■□□ 2.03
RRP9-201ENST00000232888 FAM47AQ5JRC9 791 aa27.73■■■□□ 2.03
RRP9-201ENST00000232888 WASF1Q92558 559 aa27.73■■■□□ 2.03
RRP9-201ENST00000232888 IDI2Q9BXS1 227 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms