RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CCDC150Q8NCX0 1101 aa23.79■■□□□ 1.4
SNX3-201ENST00000230085 HELLSQ9NRZ9 838 aa23.79■■□□□ 1.4
SNX3-201ENST00000230085 BECN2A8MW95 431 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 IARSP41252 1262 aaKnown RBP23.78■■□□□ 1.4
SNX3-201ENST00000230085 STK3Q13188 491 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 UBE4AQ14139 1066 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 PUM3Q15397 648 aaKnown RBP23.78■■□□□ 1.4
SNX3-201ENST00000230085 GOLPH3LQ9H4A5 285 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 RTEL1Q9NZ71 1219 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 PPIP5K2O43314 1243 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 CTDNEP1O95476 244 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 FGFR2P21802 821 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 TIMM10P62072 90 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 ADALQ6DHV7 355 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 FMR1NBQ8N0W7 255 aaPredicted RBP23.78■■□□□ 1.4
SNX3-201ENST00000230085 KBTBD3Q8NAB2 608 aa23.78■■□□□ 1.4
SNX3-201ENST00000230085 ZC3H12CQ9C0D7 883 aaKnown RBP23.78■■□□□ 1.4
SNX3-201ENST00000230085 SLU7O95391 586 aaKnown RBP23.77■■□□□ 1.4
SNX3-201ENST00000230085 LMNB1P20700 586 aa23.77■■□□□ 1.4
SNX3-201ENST00000230085 EYA3Q99504 573 aa23.77■■□□□ 1.4
SNX3-201ENST00000230085 GPR108Q9NPR9 543 aa23.77■■□□□ 1.4
SNX3-201ENST00000230085 ZNF215Q9UL58 517 aaPredicted RBP23.77■■□□□ 1.4
SNX3-201ENST00000230085 DTNBO60941 627 aa23.76■■□□□ 1.39
SNX3-201ENST00000230085 IRS2Q9Y4H2 1338 aa23.76■■□□□ 1.39
SNX3-201ENST00000230085 KMT5BQ4FZB7 885 aa23.75■■□□□ 1.39
SNX3-201ENST00000230085 LARGE2Q8N3Y3 721 aa23.75■■□□□ 1.39
SNX3-201ENST00000230085 USP28Q96RU2 1077 aa23.75■■□□□ 1.39
SNX3-201ENST00000230085 PTPDC1A2A3K4 754 aa23.75■■□□□ 1.39
SNX3-201ENST00000230085 USP27XA6NNY8 438 aa23.75■■□□□ 1.39
SNX3-201ENST00000230085 TERF2Q15554 542 aa23.75■■□□□ 1.39
SNX3-201ENST00000230085 NBPF11Q86T75 865 aa23.75■■□□□ 1.39
SNX3-201ENST00000230085 LPIN2Q92539 896 aa23.75■■□□□ 1.39
SNX3-201ENST00000230085 MRPS27Q92552 414 aaKnown RBP23.75■■□□□ 1.39
SNX3-201ENST00000230085 VPS33BQ9H267 617 aa23.75■■□□□ 1.39
SNX3-201ENST00000230085 AKAP2Q9Y2D5 859 aa23.75■■□□□ 1.39
SNX3-201ENST00000230085 COL4A5P29400 1685 aa23.74■■□□□ 1.39
SNX3-201ENST00000230085 A0A1B0GUL7 405 aa23.74■■□□□ 1.39
SNX3-201ENST00000230085 YEATS4O95619 227 aa23.74■■□□□ 1.39
SNX3-201ENST00000230085 C9orf131Q5VYM1 1079 aa23.74■■□□□ 1.39
SNX3-201ENST00000230085 STOX1Q6ZVD7 989 aa23.74■■□□□ 1.39
SNX3-201ENST00000230085 RNF181Q9P0P0 153 aa23.74■■□□□ 1.39
SNX3-201ENST00000230085 IFIT1P09914 478 aaKnown RBP23.73■■□□□ 1.39
SNX3-201ENST00000230085 H2AFXP16104 143 aaPredicted RBP23.73■■□□□ 1.39
SNX3-201ENST00000230085 DOK7Q18PE1 504 aa23.73■■□□□ 1.39
SNX3-201ENST00000230085 NEUROD6Q96NK8 337 aa23.73■■□□□ 1.39
SNX3-201ENST00000230085 CCP110O43303 1012 aa23.73■■□□□ 1.39
SNX3-201ENST00000230085 SLC5A1P13866 664 aa23.73■■□□□ 1.39
SNX3-201ENST00000230085 GYG1P46976 350 aa23.73■■□□□ 1.39
SNX3-201ENST00000230085 C15orf52Q6ZUT6 534 aaKnown RBP23.73■■□□□ 1.39
SNX3-201ENST00000230085 DBNDD1Q9H9R9 158 aa23.73■■□□□ 1.39
SNX3-201ENST00000230085 POLR3EQ9NVU0 708 aa23.73■■□□□ 1.39
SNX3-201ENST00000230085 NEDD4P46934 1319 aa23.72■■□□□ 1.39
SNX3-201ENST00000230085 MYO1BO43795 1136 aa23.72■■□□□ 1.39
SNX3-201ENST00000230085 ADORA1P30542 326 aa23.72■■□□□ 1.39
SNX3-201ENST00000230085 FSIP1Q8NA03 581 aa23.72■■□□□ 1.39
SNX3-201ENST00000230085 FAM84BQ96KN1 310 aaPredicted RBP23.72■■□□□ 1.39
SNX3-201ENST00000230085 KCNG4Q8TDN1 519 aa23.71■■□□□ 1.39
SNX3-201ENST00000230085 BCAMP50895 628 aa23.7■■□□□ 1.39
SNX3-201ENST00000230085 ARID5BQ14865 1188 aa23.7■■□□□ 1.39
SNX3-201ENST00000230085 ZMYM1Q5SVZ6 1142 aa23.7■■□□□ 1.39
SNX3-201ENST00000230085 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.7■■□□□ 1.39
SNX3-201ENST00000230085 JDP2Q8WYK2 163 aa23.7■■□□□ 1.39
SNX3-201ENST00000230085 DDX11Q96FC9 970 aa23.7■■□□□ 1.39
SNX3-201ENST00000230085 XAGE2Q96GT9 111 aa23.7■■□□□ 1.39
SNX3-201ENST00000230085 KIAA1468Q9P260 1216 aa23.7■■□□□ 1.39
SNX3-201ENST00000230085 DICER1Q9UPY3 1922 aaKnown RBP23.7■■□□□ 1.38
SNX3-201ENST00000230085 G3V3G9 751 aa23.7■■□□□ 1.38
SNX3-201ENST00000230085 IKBKBO14920 756 aa23.7■■□□□ 1.38
SNX3-201ENST00000230085 NRDCO43847 1150 aa23.7■■□□□ 1.38
SNX3-201ENST00000230085 DCAF8Q5TAQ9 597 aa23.7■■□□□ 1.38
SNX3-201ENST00000230085 FBXO38Q6PIJ6 1188 aa23.7■■□□□ 1.38
SNX3-201ENST00000230085 NAA30Q147X3 362 aaPredicted RBP23.69■■□□□ 1.38
SNX3-201ENST00000230085 CAVIN4Q5BKX8 364 aa23.69■■□□□ 1.38
SNX3-201ENST00000230085 E4F1Q66K89 784 aaPredicted RBP23.69■■□□□ 1.38
SNX3-201ENST00000230085 BRAPQ7Z569 592 aa23.69■■□□□ 1.38
SNX3-201ENST00000230085 NIM1KQ8IY84 436 aa23.69■■□□□ 1.38
SNX3-201ENST00000230085 PHLPP2Q6ZVD8 1323 aa23.69■■□□□ 1.38
SNX3-201ENST00000230085 ECE2O60344 883 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 HIBADHP31937 336 aaKnown RBP23.68■■□□□ 1.38
SNX3-201ENST00000230085 FBXO33Q7Z6M2 555 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 AOPEPQ8N6M6 819 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 LINC00301Q8NCQ3 95 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 TIGD1Q96MW7 591 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 KCNQ5Q9NR82 932 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 PCDHA7Q9UN72 937 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 WDR19Q8NEZ3 1342 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 YDJCA8MPS7 323 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 PDIA3P30101 505 aaKnown RBP23.68■■□□□ 1.38
SNX3-201ENST00000230085 ZNF804AQ7Z570 1209 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 FCHSD1Q86WN1 690 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 VPS37DQ86XT2 251 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 EDC3Q96F86 508 aaKnown RBP23.68■■□□□ 1.38
SNX3-201ENST00000230085 DBNDD2Q9BQY9 259 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 SRRTQ9BXP5 876 aaKnown RBP23.68■■□□□ 1.38
SNX3-201ENST00000230085 COA1Q9GZY4 146 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 CD209Q9NNX6 404 aa23.68■■□□□ 1.38
SNX3-201ENST00000230085 CHD4Q14839 1912 aa23.67■■□□□ 1.38
SNX3-201ENST00000230085 CCDC66A2RUB6 948 aa23.67■■□□□ 1.38
SNX3-201ENST00000230085 ME1P48163 572 aa23.67■■□□□ 1.38
SNX3-201ENST00000230085 TPM4P67936 248 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms