RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.96■■□□□ 1.11
PFN1-201ENST00000225655 TLR7Q9NYK1 1049 aaKnown RBP21.96■■□□□ 1.11
PFN1-201ENST00000225655 FOCADQ5VW36 1801 aa21.96■■□□□ 1.11
PFN1-201ENST00000225655 CDK5RAP2Q96SN8 1893 aa21.96■■□□□ 1.11
PFN1-201ENST00000225655 ZAP70P43403 619 aa21.95■■□□□ 1.1
PFN1-201ENST00000225655 PRMT2P55345 433 aa21.95■■□□□ 1.1
PFN1-201ENST00000225655 SLC9C1Q4G0N8 1177 aa21.95■■□□□ 1.1
PFN1-201ENST00000225655 ZNF333Q96JL9 665 aa21.95■■□□□ 1.1
PFN1-201ENST00000225655 CCDC8Q9H0W5 538 aaPredicted RBP21.95■■□□□ 1.1
PFN1-201ENST00000225655 AATFQ9NY61 560 aaKnown RBP eCLIP21.95■■□□□ 1.1
PFN1-201ENST00000225655 SLC45A1Q9Y2W3 748 aa21.95■■□□□ 1.1
PFN1-201ENST00000225655 KIAA0100Q14667 2235 aaKnown RBP21.95■■□□□ 1.1
PFN1-201ENST00000225655 ATAD5Q96QE3 1844 aa21.94■■□□□ 1.1
PFN1-201ENST00000225655 POTEFA5A3E0 1075 aa21.94■■□□□ 1.1
PFN1-201ENST00000225655 ADGRA1Q86SQ6 560 aa21.94■■□□□ 1.1
PFN1-201ENST00000225655 NBPF11Q86T75 865 aa21.94■■□□□ 1.1
PFN1-201ENST00000225655 PIH1D3Q9NQM4 214 aaKnown RBP21.94■■□□□ 1.1
PFN1-201ENST00000225655 FAM196BA6NMK8 535 aa21.93■■□□□ 1.1
PFN1-201ENST00000225655 SIPA1L1O43166 1804 aa21.93■■□□□ 1.1
PFN1-201ENST00000225655 DHX36Q9H2U1 1008 aaKnown RBP21.93■■□□□ 1.1
PFN1-201ENST00000225655 PI4KBQ9UBF8 816 aa21.93■■□□□ 1.1
PFN1-201ENST00000225655 HERC5Q9UII4 1024 aaKnown RBP21.93■■□□□ 1.1
PFN1-201ENST00000225655 EXOC6BQ9Y2D4 811 aa21.93■■□□□ 1.1
PFN1-201ENST00000225655 TRIM75PA6NK02 468 aa21.92■■□□□ 1.1
PFN1-201ENST00000225655 CYP2C8P10632 490 aa21.92■■□□□ 1.1
PFN1-201ENST00000225655 CTGFP29279 349 aa21.92■■□□□ 1.1
PFN1-201ENST00000225655 PSMC4P43686 418 aa21.92■■□□□ 1.1
PFN1-201ENST00000225655 GADL1Q6ZQY3 521 aa21.92■■□□□ 1.1
PFN1-201ENST00000225655 TRIM47Q96LD4 638 aa21.92■■□□□ 1.1
PFN1-201ENST00000225655 RWDD1Q9H446 243 aaPredicted RBP21.92■■□□□ 1.1
PFN1-201ENST00000225655 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.92■■□□□ 1.1
PFN1-201ENST00000225655 BCRP11274 1271 aa21.91■■□□□ 1.1
PFN1-201ENST00000225655 AACSQ86V21 672 aa21.91■■□□□ 1.1
PFN1-201ENST00000225655 TBC1D2Q9BYX2 928 aa21.91■■□□□ 1.1
PFN1-201ENST00000225655 PCDHB15Q9Y5E8 787 aa21.91■■□□□ 1.1
PFN1-201ENST00000225655 MGAMO43451 1857 aa21.9■■□□□ 1.1
PFN1-201ENST00000225655 FLT1P17948 1338 aa21.9■■□□□ 1.1
PFN1-201ENST00000225655 RAB11FIP3O75154 756 aa21.9■■□□□ 1.1
PFN1-201ENST00000225655 CAP2P40123 477 aa21.9■■□□□ 1.1
PFN1-201ENST00000225655 PRPF38BQ5VTL8 546 aaKnown RBP21.9■■□□□ 1.1
PFN1-201ENST00000225655 CCDC84Q86UT8 332 aaPredicted RBP21.9■■□□□ 1.1
PFN1-201ENST00000225655 SIRT2Q8IXJ6 389 aa21.9■■□□□ 1.1
PFN1-201ENST00000225655 TGFBRAP1Q8WUH2 860 aa21.9■■□□□ 1.1
PFN1-201ENST00000225655 TMEM106CQ9BVX2 250 aa21.9■■□□□ 1.1
PFN1-201ENST00000225655 SRRDQ9UH36 339 aa21.9■■□□□ 1.1
PFN1-201ENST00000225655 CENPFP49454 3210 aa21.89■■□□□ 1.1
PFN1-201ENST00000225655 LOC285556D6RIA3 1793 aa21.89■■□□□ 1.1
PFN1-201ENST00000225655 FMNL1O95466 1100 aaPredicted RBP21.89■■□□□ 1.09
PFN1-201ENST00000225655 HOXD10P28358 340 aa21.89■■□□□ 1.09
PFN1-201ENST00000225655 TMED8Q6PL24 325 aaPredicted RBP21.89■■□□□ 1.09
PFN1-201ENST00000225655 MAPKAPK5Q8IW41 473 aa21.89■■□□□ 1.09
PFN1-201ENST00000225655 RHPN1Q8TCX5 695 aa21.89■■□□□ 1.09
PFN1-201ENST00000225655 AGTPBP1Q9UPW5 1226 aa21.89■■□□□ 1.09
PFN1-201ENST00000225655 IDH1O75874 414 aaKnown RBP21.88■■□□□ 1.09
PFN1-201ENST00000225655 OSBPP22059 807 aa21.88■■□□□ 1.09
PFN1-201ENST00000225655 CYP7A1P22680 504 aa21.88■■□□□ 1.09
PFN1-201ENST00000225655 HDAC1Q13547 482 aaPredicted RBP21.88■■□□□ 1.09
PFN1-201ENST00000225655 RRP1BQ14684 758 aaKnown RBP21.88■■□□□ 1.09
PFN1-201ENST00000225655 METTL16Q86W50 562 aaKnown RBP21.88■■□□□ 1.09
PFN1-201ENST00000225655 PROCA1Q8NCQ7 364 aaPredicted RBP21.88■■□□□ 1.09
PFN1-201ENST00000225655 ZNF280CQ8ND82 737 aa21.88■■□□□ 1.09
PFN1-201ENST00000225655 SH3TC2Q8TF17 1288 aa21.88■■□□□ 1.09
PFN1-201ENST00000225655 ZBTB47Q9UFB7 747 aaPredicted RBP21.88■■□□□ 1.09
PFN1-201ENST00000225655 ECM2O94769 699 aaPredicted RBP21.87■■□□□ 1.09
PFN1-201ENST00000225655 EN2P19622 333 aaPredicted RBP21.87■■□□□ 1.09
PFN1-201ENST00000225655 FCGRTP55899 365 aa21.87■■□□□ 1.09
PFN1-201ENST00000225655 SPP2Q13103 211 aa21.87■■□□□ 1.09
PFN1-201ENST00000225655 CERS3Q8IU89 383 aa21.87■■□□□ 1.09
PFN1-201ENST00000225655 FOXP4Q8IVH2 680 aaPredicted RBP21.87■■□□□ 1.09
PFN1-201ENST00000225655 USP17L5A8MUK1 530 aa21.86■■□□□ 1.09
PFN1-201ENST00000225655 MAP3K12Q12852 859 aa21.86■■□□□ 1.09
PFN1-201ENST00000225655 SMCR8Q8TEV9 937 aaPredicted RBP21.86■■□□□ 1.09
PFN1-201ENST00000225655 KIF1BPQ96EK5 621 aa21.86■■□□□ 1.09
PFN1-201ENST00000225655 ANTXR1Q9H6X2 564 aa21.86■■□□□ 1.09
PFN1-201ENST00000225655 IL1RAPL2Q9NP60 686 aa21.86■■□□□ 1.09
PFN1-201ENST00000225655 PALD1Q9ULE6 856 aa21.86■■□□□ 1.09
PFN1-201ENST00000225655 NDUFB9Q9Y6M9 179 aa21.86■■□□□ 1.09
PFN1-201ENST00000225655 MYPNQ86TC9 1320 aa21.85■■□□□ 1.09
PFN1-201ENST00000225655 MYH1P12882 1939 aa21.85■■□□□ 1.09
PFN1-201ENST00000225655 DYNLL1P63167 89 aaKnown RBP21.85■■□□□ 1.09
PFN1-201ENST00000225655 SLC4A8Q2Y0W8 1093 aa21.85■■□□□ 1.09
PFN1-201ENST00000225655 TREML2Q5T2D2 321 aa21.85■■□□□ 1.09
PFN1-201ENST00000225655 CLASRPQ8N2M8 674 aaKnown RBP21.85■■□□□ 1.09
PFN1-201ENST00000225655 MAGEB6Q8N7X4 407 aa21.85■■□□□ 1.09
PFN1-201ENST00000225655 RAET1EQ8TD07 263 aa21.85■■□□□ 1.09
PFN1-201ENST00000225655 GCC1Q96CN9 775 aa21.85■■□□□ 1.09
PFN1-201ENST00000225655 DNAJC18Q9H819 358 aa21.85■■□□□ 1.09
PFN1-201ENST00000225655 AS3MTQ9HBK9 375 aa21.85■■□□□ 1.09
PFN1-201ENST00000225655 PNMA3Q9UL41 463 aa21.85■■□□□ 1.09
PFN1-201ENST00000225655 APBB1O00213 710 aa21.84■■□□□ 1.09
PFN1-201ENST00000225655 ASNSP08243 561 aa21.84■■□□□ 1.09
PFN1-201ENST00000225655 SH3D19Q5HYK7 790 aa21.84■■□□□ 1.09
PFN1-201ENST00000225655 ERICH6BQ5W0A0 696 aa21.84■■□□□ 1.09
PFN1-201ENST00000225655 CRACR2BQ8N4Y2 399 aaPredicted RBP21.84■■□□□ 1.09
PFN1-201ENST00000225655 MIGA1Q8NAN2 632 aa21.84■■□□□ 1.09
PFN1-201ENST00000225655 WDR18Q9BV38 432 aa21.84■■□□□ 1.09
PFN1-201ENST00000225655 TRIM34Q9BYJ4 488 aa21.84■■□□□ 1.09
PFN1-201ENST00000225655 DCTPP1Q9H773 170 aa21.84■■□□□ 1.09
PFN1-201ENST00000225655 GINM1Q9NU53 330 aa21.84■■□□□ 1.09
PFN1-201ENST00000225655 HLA-DOAP06340 250 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms