RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 FAM198AQ9UFP1 575 aa21.25■□□□□ 0.99
CBX1-201ENST00000225603 GMPSP49915 693 aaPredicted RBP21.25■□□□□ 0.99
CBX1-201ENST00000225603 APOBRQ0VD83 1088 aa21.25■□□□□ 0.99
CBX1-201ENST00000225603 ST3GAL1Q11201 340 aa21.25■□□□□ 0.99
CBX1-201ENST00000225603 DLGAP5Q15398 846 aa21.25■□□□□ 0.99
CBX1-201ENST00000225603 SLC44A5Q8NCS7 719 aa21.25■□□□□ 0.99
CBX1-201ENST00000225603 GBP4Q96PP9 640 aa21.25■□□□□ 0.99
CBX1-201ENST00000225603 SBF1O95248 1867 aa21.24■□□□□ 0.99
CBX1-201ENST00000225603 TCP10Q12799 353 aa21.24■□□□□ 0.99
CBX1-201ENST00000225603 NECAB1Q8N987 351 aa21.24■□□□□ 0.99
CBX1-201ENST00000225603 OSBPL5Q9H0X9 879 aaPredicted RBP21.24■□□□□ 0.99
CBX1-201ENST00000225603 SENP2Q9HC62 589 aa21.24■□□□□ 0.99
CBX1-201ENST00000225603 TRAK2O60296 914 aa21.24■□□□□ 0.99
CBX1-201ENST00000225603 FBXL16Q8N461 479 aa21.24■□□□□ 0.99
CBX1-201ENST00000225603 ZKSCAN3Q9BRR0 538 aa21.24■□□□□ 0.99
CBX1-201ENST00000225603 IDI2Q9BXS1 227 aa21.24■□□□□ 0.99
CBX1-201ENST00000225603 WDR19Q8NEZ3 1342 aa21.23■□□□□ 0.99
CBX1-201ENST00000225603 ECM29Q5VYK3 1845 aa21.23■□□□□ 0.99
CBX1-201ENST00000225603 ROBO3Q96MS0 1386 aa21.23■□□□□ 0.99
CBX1-201ENST00000225603 ORC4O43929 436 aa21.23■□□□□ 0.99
CBX1-201ENST00000225603 DTNBO60941 627 aa21.23■□□□□ 0.99
CBX1-201ENST00000225603 EGFRP00533 1210 aa21.23■□□□□ 0.99
CBX1-201ENST00000225603 AMOTL1Q8IY63 956 aa21.23■□□□□ 0.99
CBX1-201ENST00000225603 IGDCC4Q8TDY8 1250 aa21.23■□□□□ 0.99
CBX1-201ENST00000225603 MYH1P12882 1939 aa21.23■□□□□ 0.99
CBX1-201ENST00000225603 CLRN2A0PK11 232 aa21.23■□□□□ 0.99
CBX1-201ENST00000225603 RANBP6O60518 1105 aaKnown RBP21.23■□□□□ 0.99
CBX1-201ENST00000225603 SLC3A2P08195 630 aaKnown RBP21.23■□□□□ 0.99
CBX1-201ENST00000225603 RPS12P25398 132 aaKnown RBP21.23■□□□□ 0.99
CBX1-201ENST00000225603 ZNF280AP59817 542 aaPredicted RBP21.23■□□□□ 0.99
CBX1-201ENST00000225603 ZBED3Q96IU2 234 aaPredicted RBP21.23■□□□□ 0.99
CBX1-201ENST00000225603 ZSCAN31Q96LW9 406 aaPredicted RBP21.23■□□□□ 0.99
CBX1-201ENST00000225603 SH2B2O14492 632 aaPredicted RBP21.22■□□□□ 0.99
CBX1-201ENST00000225603 STK3Q13188 491 aa21.22■□□□□ 0.99
CBX1-201ENST00000225603 MTMR14Q8NCE2 650 aa21.22■□□□□ 0.99
CBX1-201ENST00000225603 ESR2Q92731 530 aa21.22■□□□□ 0.99
CBX1-201ENST00000225603 MYOZ2Q9NPC6 264 aa21.22■□□□□ 0.99
CBX1-201ENST00000225603 RNF181Q9P0P0 153 aa21.22■□□□□ 0.99
CBX1-201ENST00000225603 BRPF3Q9ULD4 1205 aa21.22■□□□□ 0.99
CBX1-201ENST00000225603 SLURP2P0DP57 97 aa21.21■□□□□ 0.99
CBX1-201ENST00000225603 PCP11498 1178 aaKnown RBP21.21■□□□□ 0.99
CBX1-201ENST00000225603 PDE4BQ07343 736 aa21.21■□□□□ 0.99
CBX1-201ENST00000225603 FAM47AQ5JRC9 791 aa21.21■□□□□ 0.99
CBX1-201ENST00000225603 SH3BP5LQ7L8J4 393 aa21.21■□□□□ 0.99
CBX1-201ENST00000225603 CCDC83Q8IWF9 413 aa21.21■□□□□ 0.99
CBX1-201ENST00000225603 MICALL2Q8IY33 904 aa21.21■□□□□ 0.99
CBX1-201ENST00000225603 ZNF70Q9UC06 446 aaPredicted RBP21.21■□□□□ 0.99
CBX1-201ENST00000225603 DICER1Q9UPY3 1922 aaKnown RBP21.21■□□□□ 0.99
CBX1-201ENST00000225603 NBPF9Q3BBW0 867 aa21.21■□□□□ 0.99
CBX1-201ENST00000225603 SH2B1Q9NRF2 756 aaPredicted RBP21.21■□□□□ 0.99
CBX1-201ENST00000225603 CNOT7Q9UIV1 285 aaKnown RBP21.21■□□□□ 0.99
CBX1-201ENST00000225603 WNT10BO00744 389 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 GPR162Q16538 588 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 RBM26Q5T8P6 1007 aaKnown RBP21.2■□□□□ 0.98
CBX1-201ENST00000225603 DPF2Q92785 391 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 TMEM87BQ96K49 555 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 ANGEL1Q9UNK9 670 aaKnown RBP21.2■□□□□ 0.98
CBX1-201ENST00000225603 DDTLA6NHG4 134 aaPredicted RBP21.2■□□□□ 0.98
CBX1-201ENST00000225603 IFIT3O14879 490 aaKnown RBP21.2■□□□□ 0.98
CBX1-201ENST00000225603 CDK8P49336 464 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 EVCP57679 992 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 SPDYE2Q495Y8 402 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 TMEM67Q5HYA8 995 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 C9orf131Q5VYM1 1079 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 C16orf86Q6ZW13 317 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 SAMD7Q7Z3H4 446 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 LY9Q9HBG7 655 aa21.2■□□□□ 0.98
CBX1-201ENST00000225603 NPM3O75607 178 aaKnown RBP21.19■□□□□ 0.98
CBX1-201ENST00000225603 GABPAQ06546 454 aa21.19■□□□□ 0.98
CBX1-201ENST00000225603 TTC6Q86TZ1 520 aa21.19■□□□□ 0.98
CBX1-201ENST00000225603 CWC22Q9HCG8 908 aaKnown RBP21.19■□□□□ 0.98
CBX1-201ENST00000225603 TCP10L2B9ZVM9 353 aa21.19■□□□□ 0.98
CBX1-201ENST00000225603 PDIA3P30101 505 aaKnown RBP21.19■□□□□ 0.98
CBX1-201ENST00000225603 CLEC17AQ6ZS10 378 aa21.19■□□□□ 0.98
CBX1-201ENST00000225603 RAB11FIP4Q86YS3 637 aa21.19■□□□□ 0.98
CBX1-201ENST00000225603 MKNK2Q9HBH9 465 aa21.19■□□□□ 0.98
CBX1-201ENST00000225603 NMT2O60551 498 aa21.18■□□□□ 0.98
CBX1-201ENST00000225603 INTS4Q96HW7 963 aaKnown RBP21.18■□□□□ 0.98
CBX1-201ENST00000225603 NAP1L2Q9ULW6 460 aaPredicted RBP21.18■□□□□ 0.98
CBX1-201ENST00000225603 KLF18A0A0U1RQI7 1052 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 RASA1P20936 1047 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 GPC2Q8N158 579 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 PFKFB2O60825 505 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 PTMSP20962 102 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 NUCB2P80303 420 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 TFAP4Q01664 338 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 SCRN1Q12765 414 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 SEC23AQ15436 765 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 TBC1D10BQ4KMP7 808 aaPredicted RBP21.17■□□□□ 0.98
CBX1-201ENST00000225603 ZSCAN10Q96SZ4 725 aaPredicted RBP21.17■□□□□ 0.98
CBX1-201ENST00000225603 VEZTQ9HBM0 779 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 HPS5Q9UPZ3 1129 aa21.17■□□□□ 0.98
CBX1-201ENST00000225603 TNKSO95271 1327 aa21.16■□□□□ 0.98
CBX1-201ENST00000225603 ENTPD3O75355 529 aa21.16■□□□□ 0.98
CBX1-201ENST00000225603 CCT2P78371 535 aaKnown RBP21.16■□□□□ 0.98
CBX1-201ENST00000225603 ZSCAN29Q8IWY8 852 aaPredicted RBP21.16■□□□□ 0.98
CBX1-201ENST00000225603 ENAHQ8N8S7 591 aaPredicted RBP21.16■□□□□ 0.98
CBX1-201ENST00000225603 GTF3C6Q969F1 213 aa21.16■□□□□ 0.98
CBX1-201ENST00000225603 ZNF274Q96GC6 653 aaPredicted RBP21.16■□□□□ 0.98
CBX1-201ENST00000225603 UBAC1Q9BSL1 405 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms