RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 LRWD1Q9UFC0 647 aa20.74■□□□□ 0.91
CLIP2-201ENST00000223398 EPB41P11171 864 aaKnown RBP20.74■□□□□ 0.91
CLIP2-201ENST00000223398 ATP5JP18859 108 aa20.74■□□□□ 0.91
CLIP2-201ENST00000223398 WDR44Q5JSH3 913 aa20.74■□□□□ 0.91
CLIP2-201ENST00000223398 DYMQ7RTS9 669 aa20.74■□□□□ 0.91
CLIP2-201ENST00000223398 SEC62Q99442 399 aaKnown RBP20.74■□□□□ 0.91
CLIP2-201ENST00000223398 IFNKQ9P0W0 207 aa20.74■□□□□ 0.91
CLIP2-201ENST00000223398 ELP1O95163 1332 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 E7EWF7 191 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 ALAS1P13196 640 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 SEPT12Q8IYM1 358 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 CFAP74Q9C0B2 1584 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 INTS4Q96HW7 963 aaKnown RBP20.73■□□□□ 0.91
CLIP2-201ENST00000223398 PUS3Q9BZE2 481 aaKnown RBP20.73■□□□□ 0.91
CLIP2-201ENST00000223398 SHTN1A0MZ66 631 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 SELENOOQ9BVL4 669 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 PLXNC1O60486 1568 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 TACC1O75410 805 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 AS3MTQ9HBK9 375 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 ZNF804BA4D1E1 1349 aa20.73■□□□□ 0.91
CLIP2-201ENST00000223398 FAM47CQ5HY64 1035 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 EAF2Q96CJ1 260 aaPredicted RBP20.72■□□□□ 0.91
CLIP2-201ENST00000223398 CNGA1P29973 690 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 PPP1R14CQ8TAE6 165 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 LRRC45Q96CN5 670 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 GUCA1BQ9UMX6 200 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.72■□□□□ 0.91
CLIP2-201ENST00000223398 KIF5AQ12840 1032 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 CTR9Q6PD62 1173 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 MSANTD4Q8NCY6 345 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 GLT8D2Q9H1C3 349 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 DBNDD1Q9H9R9 158 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 AOX1Q06278 1338 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 TESPA1A2RU30 521 aaPredicted RBP20.72■□□□□ 0.91
CLIP2-201ENST00000223398 POLR2DO15514 142 aaKnown RBP20.72■□□□□ 0.91
CLIP2-201ENST00000223398 MYO5CQ9NQX4 1742 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 KIF4AO95239 1232 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 GOLGA8HP0CJ92 632 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 TRPC3Q13507 836 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 GLG1Q92896 1179 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 KCNH3Q9ULD8 1083 aa20.72■□□□□ 0.91
CLIP2-201ENST00000223398 KRT9P35527 623 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 KARSQ15046 597 aaKnown RBP20.71■□□□□ 0.91
CLIP2-201ENST00000223398 CALCRLQ16602 461 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 ERFEQ4G0M1 354 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 BEND3Q5T5X7 828 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 KRT25Q7Z3Z0 450 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 WDR17Q8IZU2 1322 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 CERKLQ49MI3 558 aaPredicted RBP20.71■□□□□ 0.91
CLIP2-201ENST00000223398 CAPZA3Q96KX2 299 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 NOC4LQ9BVI4 516 aaKnown RBP20.71■□□□□ 0.91
CLIP2-201ENST00000223398 PDE6AP16499 860 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 KRT40Q6A162 431 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 GPIHBP1Q8IV16 184 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 MAGI3Q5TCQ9 1506 aa20.71■□□□□ 0.91
CLIP2-201ENST00000223398 LZTFL1Q9NQ48 299 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 SEC31BQ9NQW1 1179 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 IFNL3Q8IZI9 196 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 JAK2O60674 1132 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 PHKA1P46020 1223 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 MYCT1Q8N699 235 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.7■□□□□ 0.9
CLIP2-201ENST00000223398 CHURC1Q8WUH1 139 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 ATP6V0A2Q9Y487 856 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 DCAF15Q66K64 600 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 UNC5CLQ8IV45 518 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 VPS16Q9H269 839 aa20.7■□□□□ 0.9
CLIP2-201ENST00000223398 LUC7L2Q9Y383 392 aaKnown RBP20.7■□□□□ 0.9
CLIP2-201ENST00000223398 SMCO2A6NFE2 343 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 PRPHP41219 470 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 HERC4Q5GLZ8 1057 aaPredicted RBP20.69■□□□□ 0.9
CLIP2-201ENST00000223398 ZBTB9Q96C00 473 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 INCENPQ9NQS7 918 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 STAMQ92783 540 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 SRP68Q9UHB9 627 aaKnown RBP20.69■□□□□ 0.9
CLIP2-201ENST00000223398 ADORA1P30542 326 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 TPH2Q8IWU9 490 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 REXO1Q8N1G1 1221 aaKnown RBP20.69■□□□□ 0.9
CLIP2-201ENST00000223398 RNF34Q969K3 372 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 DNM3Q9UQ16 869 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 POTEB2H3BUK9 544 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 CCDC175P0C221 793 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 KRT83P78385 493 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 FAM160A1Q05DH4 1040 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 LMBR1Q8WVP7 490 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 FAM135BQ49AJ0 1406 aa20.69■□□□□ 0.9
CLIP2-201ENST00000223398 DKC1O60832 514 aaKnown RBP eCLIP20.68■□□□□ 0.93e-8■■■■■ 29.5
CLIP2-201ENST00000223398 SPOUT1Q5T280 376 aaKnown RBP20.68■□□□□ 0.9
CLIP2-201ENST00000223398 ARHGEF16Q5VV41 709 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 NCAPG2Q86XI2 1143 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 LZTS2Q9BRK4 669 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 A0A0D9SFI3 127 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 A0A1W2PRG0 241 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 IL6STP40189 918 aaPredicted RBP20.68■□□□□ 0.9
CLIP2-201ENST00000223398 CCDC117Q8IWD4 279 aaPredicted RBP20.68■□□□□ 0.9
CLIP2-201ENST00000223398 NELFCDQ8IXH7 590 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 FAM107BQ9H098 131 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 CNNM4Q6P4Q7 775 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 NLRX1Q86UT6 975 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 ZNF654Q8IZM8 581 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms