RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 FKBP1CQ5VVH2 108 aa27.22■■□□□ 1.95
USF2-201ENST00000222305 RALYLQ86SE5 291 aaKnown RBP27.22■■□□□ 1.95
USF2-201ENST00000222305 TTC6Q86TZ1 520 aa27.22■■□□□ 1.95
USF2-201ENST00000222305 RNF41Q9H4P4 317 aaPredicted RBP27.22■■□□□ 1.95
USF2-201ENST00000222305 COL2A1P02458 1487 aaPredicted RBP27.22■■□□□ 1.95
USF2-201ENST00000222305 PRDM1O75626 825 aa27.21■■□□□ 1.95
USF2-201ENST00000222305 CD2BP2O95400 341 aaKnown RBP27.21■■□□□ 1.95
USF2-201ENST00000222305 SLC3A2P08195 630 aaKnown RBP27.21■■□□□ 1.95
USF2-201ENST00000222305 RPS6KB1P23443 525 aa27.21■■□□□ 1.95
USF2-201ENST00000222305 MB21D2Q8IYB1 491 aaPredicted RBP27.21■■□□□ 1.95
USF2-201ENST00000222305 SLC44A5Q8NCS7 719 aa27.21■■□□□ 1.95
USF2-201ENST00000222305 FAM151AQ8WW52 585 aa27.21■■□□□ 1.95
USF2-201ENST00000222305 ATRNL1Q5VV63 1379 aa27.2■■□□□ 1.95
USF2-201ENST00000222305 ANGEL2Q5VTE6 544 aaKnown RBP27.2■■□□□ 1.95
USF2-201ENST00000222305 CHST3Q7LGC8 479 aa27.2■■□□□ 1.95
USF2-201ENST00000222305 ZNF526Q8TF50 670 aaPredicted RBP27.2■■□□□ 1.95
USF2-201ENST00000222305 DHX36Q9H2U1 1008 aaKnown RBP27.2■■□□□ 1.95
USF2-201ENST00000222305 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.2■■□□□ 1.95
USF2-201ENST00000222305 HLA-DOAP06340 250 aa27.19■■□□□ 1.94
USF2-201ENST00000222305 FAM83AQ86UY5 434 aa27.19■■□□□ 1.94
USF2-201ENST00000222305 TMEM39BQ9GZU3 492 aa27.19■■□□□ 1.94
USF2-201ENST00000222305 CNNM2Q9H8M5 875 aa27.19■■□□□ 1.94
USF2-201ENST00000222305 GGA3Q9NZ52 723 aa27.19■■□□□ 1.94
USF2-201ENST00000222305 HMGB1P09429 215 aaKnown RBP27.19■■□□□ 1.94
USF2-201ENST00000222305 FGRP09769 529 aa27.19■■□□□ 1.94
USF2-201ENST00000222305 SLURP2P0DP57 97 aa27.19■■□□□ 1.94
USF2-201ENST00000222305 PDE4BQ07343 736 aa27.19■■□□□ 1.94
USF2-201ENST00000222305 TTC14Q96N46 770 aa27.19■■□□□ 1.94
USF2-201ENST00000222305 KRT23Q9C075 422 aa27.19■■□□□ 1.94
USF2-201ENST00000222305 POTECB2RU33 542 aa27.18■■□□□ 1.94
USF2-201ENST00000222305 KDM4AO75164 1064 aa27.18■■□□□ 1.94
USF2-201ENST00000222305 EPHX2P34913 555 aa27.18■■□□□ 1.94
USF2-201ENST00000222305 TNNI2P48788 182 aa27.18■■□□□ 1.94
USF2-201ENST00000222305 C16orf86Q6ZW13 317 aa27.18■■□□□ 1.94
USF2-201ENST00000222305 CYB5R4Q7L1T6 521 aa27.18■■□□□ 1.94
USF2-201ENST00000222305 DHX32Q7L7V1 743 aaKnown RBP27.18■■□□□ 1.94
USF2-201ENST00000222305 CDAN1Q8IWY9 1227 aa27.18■■□□□ 1.94
USF2-201ENST00000222305 LRRC2Q9BYS8 371 aa27.18■■□□□ 1.94
USF2-201ENST00000222305 PDRG1Q9NUG6 133 aa27.18■■□□□ 1.94
USF2-201ENST00000222305 ST18O60284 1047 aa27.17■■□□□ 1.94
USF2-201ENST00000222305 PCP11498 1178 aaKnown RBP27.17■■□□□ 1.94
USF2-201ENST00000222305 CSRNP1Q96S65 589 aa27.17■■□□□ 1.94
USF2-201ENST00000222305 SERPINB13Q9UIV8 391 aa27.17■■□□□ 1.94
USF2-201ENST00000222305 ORC4O43929 436 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 CDK8P49336 464 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 ANTXR2P58335 489 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 GABPAQ06546 454 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 TNFAIP1Q13829 316 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 RASA3Q14644 834 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 PI4KBQ9UBF8 816 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 FAM196BA6NMK8 535 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 RANBP6O60518 1105 aaKnown RBP27.16■■□□□ 1.94
USF2-201ENST00000222305 MCM5P33992 734 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 EXOSC10Q01780 885 aaKnown RBP27.16■■□□□ 1.94
USF2-201ENST00000222305 EHD4Q9H223 541 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 MKNK2Q9HBH9 465 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 ZSWIM5Q9P217 1185 aa27.16■■□□□ 1.94
USF2-201ENST00000222305 IQCA1LA6NCM1 817 aa27.15■■□□□ 1.94
USF2-201ENST00000222305 PRC1O43663 620 aa27.15■■□□□ 1.94
USF2-201ENST00000222305 AK2P54819 239 aa27.15■■□□□ 1.94
USF2-201ENST00000222305 NOL8Q76FK4 1167 aaKnown RBP27.15■■□□□ 1.94
USF2-201ENST00000222305 APOBEC3FQ8IUX4 373 aaKnown RBP27.15■■□□□ 1.94
USF2-201ENST00000222305 CRACR2BQ8N4Y2 399 aaPredicted RBP27.15■■□□□ 1.94
USF2-201ENST00000222305 ESR2Q92731 530 aa27.15■■□□□ 1.94
USF2-201ENST00000222305 RRAGCQ9HB90 399 aa27.15■■□□□ 1.94
USF2-201ENST00000222305 USP50Q70EL3 339 aaPredicted RBP27.14■■□□□ 1.94
USF2-201ENST00000222305 TAF1DQ9H5J8 278 aaPredicted RBP27.14■■□□□ 1.94
USF2-201ENST00000222305 DNAJC18Q9H819 358 aa27.14■■□□□ 1.94
USF2-201ENST00000222305 PGAP2Q9UHJ9 254 aa27.14■■□□□ 1.94
USF2-201ENST00000222305 FAM47AQ5JRC9 791 aa27.13■■□□□ 1.93
USF2-201ENST00000222305 Q6ZUG5 572 aa27.13■■□□□ 1.93
USF2-201ENST00000222305 LARP6Q9BRS8 491 aaKnown RBP27.13■■□□□ 1.93
USF2-201ENST00000222305 DEFB129Q9H1M3 183 aa27.13■■□□□ 1.93
USF2-201ENST00000222305 RASA1P20936 1047 aa27.12■■□□□ 1.93
USF2-201ENST00000222305 SNX21Q969T3 373 aa27.12■■□□□ 1.93
USF2-201ENST00000222305 ZKSCAN3Q9BRR0 538 aa27.12■■□□□ 1.93
USF2-201ENST00000222305 TBC1D2Q9BYX2 928 aa27.12■■□□□ 1.93
USF2-201ENST00000222305 TOB2Q14106 344 aaPredicted RBP27.12■■□□□ 1.93
USF2-201ENST00000222305 EAPPQ56P03 285 aaPredicted RBP27.12■■□□□ 1.93
USF2-201ENST00000222305 TEPSINQ96N21 525 aa27.12■■□□□ 1.93
USF2-201ENST00000222305 ZNF287Q9HBT7 754 aa27.12■■□□□ 1.93
USF2-201ENST00000222305 SWAP70Q9UH65 585 aa27.12■■□□□ 1.93
USF2-201ENST00000222305 PITPNM2Q9BZ72 1349 aa27.11■■□□□ 1.93
USF2-201ENST00000222305 SHMT1P34896 483 aa27.11■■□□□ 1.93
USF2-201ENST00000222305 FOXP4Q8IVH2 680 aaPredicted RBP27.11■■□□□ 1.93
USF2-201ENST00000222305 ZNF444Q8N0Y2 327 aaPredicted RBP27.11■■□□□ 1.93
USF2-201ENST00000222305 TRIM34Q9BYJ4 488 aa27.11■■□□□ 1.93
USF2-201ENST00000222305 NMRK2Q9NPI5 230 aa27.11■■□□□ 1.93
USF2-201ENST00000222305 GPHNQ9NQX3 736 aaPredicted RBP27.11■■□□□ 1.93
USF2-201ENST00000222305 GREB1LQ9C091 1923 aaPredicted RBP27.11■■□□□ 1.93
USF2-201ENST00000222305 TSPY2A6NKD2 308 aa27.1■■□□□ 1.93
USF2-201ENST00000222305 FGD1P98174 961 aa27.1■■□□□ 1.93
USF2-201ENST00000222305 HSCBQ8IWL3 235 aa27.1■■□□□ 1.93
USF2-201ENST00000222305 WDR19Q8NEZ3 1342 aa27.1■■□□□ 1.93
USF2-201ENST00000222305 ATAD5Q96QE3 1844 aa27.1■■□□□ 1.93
USF2-201ENST00000222305 TFAP4Q01664 338 aa27.09■■□□□ 1.93
USF2-201ENST00000222305 METTL16Q86W50 562 aaKnown RBP27.09■■□□□ 1.93
USF2-201ENST00000222305 ALDH8A1Q9H2A2 487 aaPredicted RBP27.09■■□□□ 1.93
USF2-201ENST00000222305 PRAMEF18Q5VWM3 479 aa27.08■■□□□ 1.93
USF2-201ENST00000222305 BRF1Q92994 677 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms