RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 AMOTL1Q8IY63 956 aa23.19■■□□□ 1.3
SNAPC2-201ENST00000221573 MAP4K1Q92918 833 aa23.19■■□□□ 1.3
SNAPC2-201ENST00000221573 DYNLL2Q96FJ2 89 aa23.19■■□□□ 1.3
SNAPC2-201ENST00000221573 CELF2O95319 508 aaKnown RBP23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 HAND2P61296 217 aa23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 PPARAQ07869 468 aa23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 STK11IPQ8N1F8 1099 aa23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 RBM8AQ9Y5S9 174 aaKnown RBP23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 ATAD5Q96QE3 1844 aa23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 ROBO3Q96MS0 1386 aa23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 NF2P35240 595 aa23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 CRACR2BQ8N4Y2 399 aaPredicted RBP23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 EHD4Q9H223 541 aa23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 SERPINB13Q9UIV8 391 aa23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 U3KPZ7 1027 aaPredicted RBP23.18■■□□□ 1.3
SNAPC2-201ENST00000221573 REC8O95072 547 aa23.17■■□□□ 1.3
SNAPC2-201ENST00000221573 SEC24BO95487 1268 aa23.17■■□□□ 1.3
SNAPC2-201ENST00000221573 CTDSPL2Q05D32 466 aa23.17■■□□□ 1.3
SNAPC2-201ENST00000221573 GABPAQ06546 454 aa23.17■■□□□ 1.3
SNAPC2-201ENST00000221573 CST9Q5W186 159 aa23.17■■□□□ 1.3
SNAPC2-201ENST00000221573 METTL16Q86W50 562 aaKnown RBP23.17■■□□□ 1.3
SNAPC2-201ENST00000221573 SLC44A5Q8NCS7 719 aa23.17■■□□□ 1.3
SNAPC2-201ENST00000221573 HOOK2Q96ED9 719 aa23.17■■□□□ 1.3
SNAPC2-201ENST00000221573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.17■■□□□ 1.3
SNAPC2-201ENST00000221573 MAP3K10Q02779 954 aa23.16■■□□□ 1.3
SNAPC2-201ENST00000221573 DCAF15Q66K64 600 aa23.16■■□□□ 1.3
SNAPC2-201ENST00000221573 MOB2Q70IA6 237 aa23.16■■□□□ 1.3
SNAPC2-201ENST00000221573 FOXP4Q8IVH2 680 aaPredicted RBP23.16■■□□□ 1.3
SNAPC2-201ENST00000221573 NBPF3Q9H094 633 aa23.16■■□□□ 1.3
SNAPC2-201ENST00000221573 HERC5Q9UII4 1024 aaKnown RBP23.16■■□□□ 1.3
SNAPC2-201ENST00000221573 TBC1D12O60347 775 aa23.15■■□□□ 1.3
SNAPC2-201ENST00000221573 TRIM34Q9BYJ4 488 aa23.15■■□□□ 1.3
SNAPC2-201ENST00000221573 CTNNA3Q9UI47 895 aa23.15■■□□□ 1.3
SNAPC2-201ENST00000221573 TACC3Q9Y6A5 838 aa23.15■■□□□ 1.3
SNAPC2-201ENST00000221573 DOCK1Q14185 1865 aa23.14■■□□□ 1.3
SNAPC2-201ENST00000221573 USP2O75604 605 aaPredicted RBP23.14■■□□□ 1.3
SNAPC2-201ENST00000221573 TTLL12Q14166 644 aaPredicted RBP23.14■■□□□ 1.3
SNAPC2-201ENST00000221573 C16orf86Q6ZW13 317 aa23.14■■□□□ 1.3
SNAPC2-201ENST00000221573 ZNF341Q9BYN7 854 aa23.14■■□□□ 1.3
SNAPC2-201ENST00000221573 GBA2Q9HCG7 927 aaPredicted RBP23.14■■□□□ 1.3
SNAPC2-201ENST00000221573 ANAPC4Q9UJX5 808 aa23.14■■□□□ 1.3
SNAPC2-201ENST00000221573 ZNF213O14771 459 aa23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 PPP1R12BO60237 982 aaPredicted RBP23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 CYP21A2P08686 494 aa23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 IMMTQ16891 758 aaKnown RBP23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 TBC1D10CQ8IV04 446 aa23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 ANGEL1Q9UNK9 670 aaKnown RBP23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 SHMT1P34896 483 aa23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 CDK8P49336 464 aa23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 RRP1BQ14684 758 aaKnown RBP23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 NECTIN1Q15223 517 aa23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 KLRG1Q96E93 195 aa23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 INCENPQ9NQS7 918 aa23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 TAF6LQ9Y6J9 622 aa23.13■■□□□ 1.29
SNAPC2-201ENST00000221573 PHF20L1A8MW92 1017 aa23.12■■□□□ 1.29
SNAPC2-201ENST00000221573 WRNIP1Q96S55 665 aa23.12■■□□□ 1.29
SNAPC2-201ENST00000221573 USP26Q9BXU7 913 aa23.12■■□□□ 1.29
SNAPC2-201ENST00000221573 PRDM1O75626 825 aa23.11■■□□□ 1.29
SNAPC2-201ENST00000221573 INPP5BP32019 993 aa23.11■■□□□ 1.29
SNAPC2-201ENST00000221573 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.11■■□□□ 1.29
SNAPC2-201ENST00000221573 SWAP70Q9UH65 585 aa23.11■■□□□ 1.29
SNAPC2-201ENST00000221573 ZNF112Q9UJU3 913 aa23.11■■□□□ 1.29
SNAPC2-201ENST00000221573 SLC27A2O14975 620 aa23.1■■□□□ 1.29
SNAPC2-201ENST00000221573 SLC3A2P08195 630 aaKnown RBP23.1■■□□□ 1.29
SNAPC2-201ENST00000221573 IREB2P48200 963 aaKnown RBP23.1■■□□□ 1.29
SNAPC2-201ENST00000221573 MAP3K11Q16584 847 aa23.1■■□□□ 1.29
SNAPC2-201ENST00000221573 SHROOM1Q2M3G4 852 aaPredicted RBP23.1■■□□□ 1.29
SNAPC2-201ENST00000221573 CREB3L3Q68CJ9 461 aa23.1■■□□□ 1.29
SNAPC2-201ENST00000221573 TATDN1Q6P1N9 297 aa23.1■■□□□ 1.29
SNAPC2-201ENST00000221573 ARMC9Q7Z3E5 817 aa23.1■■□□□ 1.29
SNAPC2-201ENST00000221573 C2orf69Q8N8R5 385 aa23.1■■□□□ 1.29
SNAPC2-201ENST00000221573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.1■■□□□ 1.29
SNAPC2-201ENST00000221573 UBE2Q2LH0YL09 131 aa23.09■■□□□ 1.29
SNAPC2-201ENST00000221573 GDF11O95390 407 aa23.09■■□□□ 1.29
SNAPC2-201ENST00000221573 AKNAD1Q5T1N1 836 aa23.09■■□□□ 1.29
SNAPC2-201ENST00000221573 STAG1Q8WVM7 1258 aa23.09■■□□□ 1.29
SNAPC2-201ENST00000221573 GREB1LQ9C091 1923 aaPredicted RBP23.09■■□□□ 1.29
SNAPC2-201ENST00000221573 NEDD4P46934 1319 aa23.09■■□□□ 1.29
SNAPC2-201ENST00000221573 RASA1P20936 1047 aa23.08■■□□□ 1.29
SNAPC2-201ENST00000221573 FKBP1BP68106 108 aa23.08■■□□□ 1.29
SNAPC2-201ENST00000221573 PDE4BQ07343 736 aa23.08■■□□□ 1.29
SNAPC2-201ENST00000221573 ZKSCAN4Q969J2 545 aaPredicted RBP23.08■■□□□ 1.29
SNAPC2-201ENST00000221573 MKNK2Q9HBH9 465 aa23.08■■□□□ 1.29
SNAPC2-201ENST00000221573 TMEM88BA6NKF7 163 aa23.08■■□□□ 1.28
SNAPC2-201ENST00000221573 EPB41L2O43491 1005 aaKnown RBP23.08■■□□□ 1.28
SNAPC2-201ENST00000221573 HSPA4P34932 840 aa23.08■■□□□ 1.28
SNAPC2-201ENST00000221573 JAG1P78504 1218 aa23.08■■□□□ 1.28
SNAPC2-201ENST00000221573 CERKLQ49MI3 558 aaPredicted RBP23.08■■□□□ 1.28
SNAPC2-201ENST00000221573 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.08■■□□□ 1.28
SNAPC2-201ENST00000221573 PHIPQ8WWQ0 1821 aa23.07■■□□□ 1.28
SNAPC2-201ENST00000221573 FGRP09769 529 aa23.07■■□□□ 1.28
SNAPC2-201ENST00000221573 CAP2P40123 477 aa23.07■■□□□ 1.28
SNAPC2-201ENST00000221573 VGLL4Q14135 290 aa23.07■■□□□ 1.28
SNAPC2-201ENST00000221573 MFSD6Q6ZSS7 791 aa23.07■■□□□ 1.28
SNAPC2-201ENST00000221573 STOX1Q6ZVD7 989 aa23.07■■□□□ 1.28
SNAPC2-201ENST00000221573 RASEFQ8IZ41 740 aa23.07■■□□□ 1.28
SNAPC2-201ENST00000221573 NKX2-3Q8TAU0 364 aa23.07■■□□□ 1.28
SNAPC2-201ENST00000221573 CLMNQ96JQ2 1002 aa23.07■■□□□ 1.28
SNAPC2-201ENST00000221573 BACH2Q9BYV9 841 aa23.07■■□□□ 1.28
SNAPC2-201ENST00000221573 TOMM22Q9NS69 142 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms