RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 A0A0G2JS52 829 aa24.25■■□□□ 1.47
CCDC130-201ENST00000221554 CCDC144BQ3MJ40 725 aa24.25■■□□□ 1.47
CCDC130-201ENST00000221554 CCDC144CPQ8IYA2 1237 aa24.25■■□□□ 1.47
CCDC130-201ENST00000221554 NKX2-3Q8TAU0 364 aa24.25■■□□□ 1.47
CCDC130-201ENST00000221554 TOMM22Q9NS69 142 aa24.25■■□□□ 1.47
CCDC130-201ENST00000221554 CEP131Q9UPN4 1083 aa24.25■■□□□ 1.47
CCDC130-201ENST00000221554 MORC2Q9Y6X9 1032 aaPredicted RBP24.25■■□□□ 1.47
CCDC130-201ENST00000221554 NRDCO43847 1150 aa24.24■■□□□ 1.47
CCDC130-201ENST00000221554 XBP1P17861 261 aa24.24■■□□□ 1.47
CCDC130-201ENST00000221554 MARCKSP29966 332 aaPredicted RBP24.24■■□□□ 1.47
CCDC130-201ENST00000221554 DPCR1Q3MIW9 517 aa24.24■■□□□ 1.47
CCDC130-201ENST00000221554 CRACR2BQ8N4Y2 399 aaPredicted RBP24.24■■□□□ 1.47
CCDC130-201ENST00000221554 KRI1Q8N9T8 703 aaKnown RBP24.24■■□□□ 1.47
CCDC130-201ENST00000221554 PRKAB2O43741 272 aa24.24■■□□□ 1.47
CCDC130-201ENST00000221554 RRP12Q5JTH9 1297 aaKnown RBP24.24■■□□□ 1.47
CCDC130-201ENST00000221554 SLC10A5Q5PT55 438 aa24.24■■□□□ 1.47
CCDC130-201ENST00000221554 FANCBQ8NB91 859 aa24.24■■□□□ 1.47
CCDC130-201ENST00000221554 SHC4Q6S5L8 630 aa24.23■■□□□ 1.47
CCDC130-201ENST00000221554 SEPT12Q8IYM1 358 aa24.23■■□□□ 1.47
CCDC130-201ENST00000221554 CCDC150Q8NCX0 1101 aa24.23■■□□□ 1.47
CCDC130-201ENST00000221554 BRIP1Q9BX63 1249 aa24.23■■□□□ 1.47
CCDC130-201ENST00000221554 PDS5AQ29RF7 1337 aaKnown RBP24.23■■□□□ 1.47
CCDC130-201ENST00000221554 SNAP23O00161 211 aa24.22■■□□□ 1.47
CCDC130-201ENST00000221554 IGSF3O75054 1194 aa24.22■■□□□ 1.47
CCDC130-201ENST00000221554 TPD52L1Q16890 204 aaPredicted RBP24.22■■□□□ 1.47
CCDC130-201ENST00000221554 ZNF579Q8NAF0 562 aaKnown RBP24.22■■□□□ 1.47
CCDC130-201ENST00000221554 MYL10Q9BUA6 226 aa24.22■■□□□ 1.47
CCDC130-201ENST00000221554 INCENPQ9NQS7 918 aa24.22■■□□□ 1.47
CCDC130-201ENST00000221554 RAI14Q9P0K7 980 aa24.22■■□□□ 1.47
CCDC130-201ENST00000221554 ZBTB22O15209 634 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 SKILP12757 684 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 SYCP1Q15431 976 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 NBPF11Q86T75 865 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 ZNF654Q8IZM8 581 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 RNF26Q9BY78 433 aaPredicted RBP24.21■■□□□ 1.47
CCDC130-201ENST00000221554 NYXQ9GZU5 481 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 TACC3Q9Y6A5 838 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 MYH14Q7Z406 1995 aaKnown RBP24.21■■□□□ 1.47
CCDC130-201ENST00000221554 COL5A3P25940 1745 aaPredicted RBP24.21■■□□□ 1.47
CCDC130-201ENST00000221554 ECM29Q5VYK3 1845 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 KIF2AO00139 706 aaPredicted RBP24.21■■□□□ 1.47
CCDC130-201ENST00000221554 CBFA2T2O43439 604 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 CALM1P0DP23 149 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 CALM2P0DP24 149 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 CALM3P0DP25 149 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 TNNT1P13805 278 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 OLFM4Q6UX06 510 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 DIS3L2Q8IYB7 885 aaKnown RBP24.21■■□□□ 1.47
CCDC130-201ENST00000221554 KCNH3Q9ULD8 1083 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 MROH7-TTC4A0A0A0MT08 1334 aa24.21■■□□□ 1.47
CCDC130-201ENST00000221554 KCNJ6P48051 423 aa24.2■■□□□ 1.46
CCDC130-201ENST00000221554 NT5C2P49902 561 aa24.2■■□□□ 1.46
CCDC130-201ENST00000221554 AKAP17AQ02040 695 aaKnown RBP24.2■■□□□ 1.46
CCDC130-201ENST00000221554 MIGA1Q8NAN2 632 aa24.2■■□□□ 1.46
CCDC130-201ENST00000221554 RBM28Q9NW13 759 aaKnown RBP24.2■■□□□ 1.46
CCDC130-201ENST00000221554 KANK3Q6NY19 840 aa24.19■■□□□ 1.46
CCDC130-201ENST00000221554 KRBA2Q6ZNG9 492 aa24.19■■□□□ 1.46
CCDC130-201ENST00000221554 ERCC4Q92889 916 aaPredicted RBP24.19■■□□□ 1.46
CCDC130-201ENST00000221554 CCDC34Q96HJ3 373 aa24.19■■□□□ 1.46
CCDC130-201ENST00000221554 ABCF2Q9UG63 623 aa24.19■■□□□ 1.46
CCDC130-201ENST00000221554 CNTNAP4Q9C0A0 1308 aa24.19■■□□□ 1.46
CCDC130-201ENST00000221554 RIOK3O14730 519 aaKnown RBP24.19■■□□□ 1.46
CCDC130-201ENST00000221554 CTIFO43310 598 aaKnown RBP24.19■■□□□ 1.46
CCDC130-201ENST00000221554 TUBB4AP04350 444 aa24.19■■□□□ 1.46
CCDC130-201ENST00000221554 SEC23AQ15436 765 aa24.19■■□□□ 1.46
CCDC130-201ENST00000221554 ERFEQ4G0M1 354 aa24.19■■□□□ 1.46
CCDC130-201ENST00000221554 FILIP1Q7Z7B0 1213 aa24.19■■□□□ 1.46
CCDC130-201ENST00000221554 CNNM3Q8NE01 707 aa24.19■■□□□ 1.46
CCDC130-201ENST00000221554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.18■■□□□ 1.46
CCDC130-201ENST00000221554 FGRP09769 529 aa24.18■■□□□ 1.46
CCDC130-201ENST00000221554 PTPREP23469 700 aa24.18■■□□□ 1.46
CCDC130-201ENST00000221554 NCAPHQ15003 741 aa24.18■■□□□ 1.46
CCDC130-201ENST00000221554 RIOK1Q9BRS2 568 aaKnown RBP24.18■■□□□ 1.46
CCDC130-201ENST00000221554 MINPP1Q9UNW1 487 aa24.18■■□□□ 1.46
CCDC130-201ENST00000221554 SBF2Q86WG5 1849 aa24.17■■□□□ 1.46
CCDC130-201ENST00000221554 BTBD18B2RXH4 712 aa24.17■■□□□ 1.46
CCDC130-201ENST00000221554 MYL5Q02045 173 aa24.17■■□□□ 1.46
CCDC130-201ENST00000221554 IQCA1Q86XH1 822 aa24.17■■□□□ 1.46
CCDC130-201ENST00000221554 UBE2Q2Q8WVN8 375 aa24.17■■□□□ 1.46
CCDC130-201ENST00000221554 ANKRD2Q9GZV1 360 aa24.17■■□□□ 1.46
CCDC130-201ENST00000221554 DACH1Q9UI36 760 aa24.17■■□□□ 1.46
CCDC130-201ENST00000221554 MINDY4BA8MYZ0 360 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 BIN1O00499 593 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 SMC2O95347 1197 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 BMP15O95972 392 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 CCZ1BP86790 482 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 CCZ1P86791 482 aaPredicted RBP24.16■■□□□ 1.46
CCDC130-201ENST00000221554 FAM182BQ5T319 152 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 RC3H1Q5TC82 1133 aaKnown RBP24.16■■□□□ 1.46
CCDC130-201ENST00000221554 CATIPQ7Z7H3 387 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 ZSCAN10Q96SZ4 725 aaPredicted RBP24.16■■□□□ 1.46
CCDC130-201ENST00000221554 XPO4Q9C0E2 1151 aaKnown RBP24.16■■□□□ 1.46
CCDC130-201ENST00000221554 IFNKQ9P0W0 207 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 TNKSO95271 1327 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 GTF2E1P29083 439 aaPredicted RBP24.16■■□□□ 1.46
CCDC130-201ENST00000221554 GYG1P46976 350 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 FBXO33Q7Z6M2 555 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 FBXW7Q969H0 707 aa24.16■■□□□ 1.46
CCDC130-201ENST00000221554 C16orf45Q96MC5 204 aaPredicted RBP24.16■■□□□ 1.46
CCDC130-201ENST00000221554 ZKSCAN3Q9BRR0 538 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 1061.6 ms