RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 DNM3Q9UQ16 869 aa16.52■□□□□ 0.24
UBR5-201ENST00000220959 PLCB4Q15147 1175 aa16.52■□□□□ 0.24
UBR5-201ENST00000220959 EP400NLQ6ZTU2 488 aa16.52■□□□□ 0.24
UBR5-201ENST00000220959 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.24
UBR5-201ENST00000220959 DEXIO95424 95 aa16.52■□□□□ 0.24
UBR5-201ENST00000220959 SPDYE2Q495Y8 402 aa16.52■□□□□ 0.24
UBR5-201ENST00000220959 SLC9C1Q4G0N8 1177 aa16.52■□□□□ 0.24
UBR5-201ENST00000220959 CNBD1Q8NA66 436 aa16.52■□□□□ 0.24
UBR5-201ENST00000220959 HMGB1P1B2RPK0 211 aaPredicted RBP16.52■□□□□ 0.23
UBR5-201ENST00000220959 P4HA1P13674 534 aa16.52■□□□□ 0.23
UBR5-201ENST00000220959 GBP6Q6ZN66 633 aa16.52■□□□□ 0.23
UBR5-201ENST00000220959 STK32BQ9NY57 414 aa16.52■□□□□ 0.23
UBR5-201ENST00000220959 MYCT1Q8N699 235 aa16.52■□□□□ 0.23
UBR5-201ENST00000220959 NAPGQ99747 312 aaPredicted RBP16.52■□□□□ 0.23
UBR5-201ENST00000220959 GCNT3O95395 438 aa16.52■□□□□ 0.23
UBR5-201ENST00000220959 DIXDC1Q155Q3 683 aa16.52■□□□□ 0.23
UBR5-201ENST00000220959 CSGALNACT2Q8N6G5 542 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 IGSF22Q8N9C0 903 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 PIK3AP1Q6ZUJ8 805 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 CROCCP2Q86T23 111 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 CLGNO14967 610 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 SH2D4BQ5SQS7 431 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 SETSIPP0DME0 302 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 ANO3Q9BYT9 981 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 OATP04181 439 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 CD19P15391 556 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 GGA1Q9UJY5 639 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 MAPK8IP1Q9UQF2 711 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 AFAP1L1Q8TED9 768 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 TMEM87BQ96K49 555 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 BICC1Q9H694 974 aaKnown RBP16.51■□□□□ 0.23
UBR5-201ENST00000220959 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
UBR5-201ENST00000220959 B4E1Z4 1266 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 PPP1R12CQ9BZL4 782 aa16.51■□□□□ 0.23
UBR5-201ENST00000220959 MRPL50Q8N5N7 158 aaKnown RBP16.5■□□□□ 0.23
UBR5-201ENST00000220959 RILPQ96NA2 401 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 FAM114A2Q9NRY5 505 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 CPXCR1Q8N123 301 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 TXNDC9O14530 226 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 PRIM1P49642 420 aaKnown RBP16.5■□□□□ 0.23
UBR5-201ENST00000220959 KIF11P52732 1056 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 H0YIN7 160 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 FBLN1P23142 703 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 EVCP57679 992 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 TCIRG1Q13488 830 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 ZKSCAN5Q9Y2L8 839 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 POLR2DO15514 142 aaKnown RBP16.5■□□□□ 0.23
UBR5-201ENST00000220959 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBR5-201ENST00000220959 PTPN23Q9H3S7 1636 aa16.5■□□□□ 0.23
UBR5-201ENST00000220959 USH1GQ495M9 461 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 VSIG1Q86XK7 387 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 TRIM31Q9BZY9 425 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 TUBB2AQ13885 445 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 CWF19L2Q2TBE0 894 aaKnown RBP16.49■□□□□ 0.23
UBR5-201ENST00000220959 CERS3Q8IU89 383 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 MED10Q9BTT4 135 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 TUBB2BQ9BVA1 445 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 MRPL44Q9H9J2 332 aaKnown RBP16.49■□□□□ 0.23
UBR5-201ENST00000220959 RBSNQ9H1K0 784 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 CTTNBP2NLQ9P2B4 639 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 PLCH2O75038 1416 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.49■□□□□ 0.234e-15■■■■■ 51
UBR5-201ENST00000220959 NR1I2O75469 434 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 ABL1P00519 1130 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 PHLDB2Q86SQ0 1253 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 RUFY4Q6ZNE9 571 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 MGEA5O60502 916 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 TBC1D8O95759 1140 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 ZNF853P0CG23 659 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 KRT15P19012 456 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 BEND3Q5T5X7 828 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 OTUD6AQ7L8S5 288 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 MAIP1Q8WWC4 291 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 PLCB1Q9NQ66 1216 aa16.49■□□□□ 0.23
UBR5-201ENST00000220959 C10orf67Q8IYJ2 551 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 TTF2Q9UNY4 1162 aaKnown RBP16.48■□□□□ 0.23
UBR5-201ENST00000220959 PRKG1Q13976 671 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 SYCE1Q8N0S2 351 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 C8orf58Q8NAV2 365 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 CABLES1Q8TDN4 633 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 HVCN1Q96D96 273 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 CALCRLQ16602 461 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 C14orf93Q9H972 538 aaKnown RBP16.48■□□□□ 0.23
UBR5-201ENST00000220959 MYO1AQ9UBC5 1043 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 PAK1Q13153 545 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 HERC4Q5GLZ8 1057 aaPredicted RBP16.48■□□□□ 0.23
UBR5-201ENST00000220959 SNX21Q969T3 373 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 KCNG1Q9UIX4 513 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 LRRC59Q96AG4 307 aaKnown RBP16.48■□□□□ 0.23
UBR5-201ENST00000220959 BCAP29Q9UHQ4 241 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 IRX3P78415 501 aaPredicted RBP16.48■□□□□ 0.23
UBR5-201ENST00000220959 PUM3Q15397 648 aaKnown RBP16.48■□□□□ 0.23
UBR5-201ENST00000220959 LARGE2Q8N3Y3 721 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 USH1CQ9Y6N9 552 aa16.48■□□□□ 0.23
UBR5-201ENST00000220959 HGSO14964 777 aaPredicted RBP16.47■□□□□ 0.23
UBR5-201ENST00000220959 YWHAEP62258 255 aaKnown RBP16.47■□□□□ 0.23
UBR5-201ENST00000220959 SNX29Q8TEQ0 813 aa16.47■□□□□ 0.23
UBR5-201ENST00000220959 EXOC3O60645 756 aa16.47■□□□□ 0.23
UBR5-201ENST00000220959 SLC1A4P43007 532 aa16.47■□□□□ 0.23
UBR5-201ENST00000220959 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms