RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 CEP57L1Q8IYX8 460 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 XRN1Q8IZH2 1706 aaKnown RBP10.77□□□□□ -0.69
CCDC113-201ENST00000219299 NUP62CLQ9H1M0 184 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 MED1Q15648 1581 aaPredicted RBP10.76□□□□□ -0.69
CCDC113-201ENST00000219299 ERICH4A6NGS2 130 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 ECE2O60344 883 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 CYP21A2P08686 494 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 CLCN1P35523 988 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 SMARCC2Q8TAQ2 1214 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 TBC1D16Q8TBP0 767 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 EHMT1Q9H9B1 1298 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 ATP6V0A2Q9Y487 856 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 hCG_1642624A0A1W2PR95 340 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 DYNC1I1O14576 645 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 TMEM266Q2M3C6 531 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 CERKLQ49MI3 558 aaPredicted RBP10.76□□□□□ -0.69
CCDC113-201ENST00000219299 CPXCR1Q8N123 301 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 KAZALD1Q96I82 304 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 TANGO6Q9C0B7 1094 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 MYO6Q9UM54 1294 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 CYP2D7A0A087X1C5 515 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 DPEP1P16444 411 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 KNDC1Q76NI1 1749 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 UBA7P41226 1012 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 PHKBQ93100 1093 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 ZSCAN16Q9H4T2 348 aaPredicted RBP10.76□□□□□ -0.69
CCDC113-201ENST00000219299 C6orf50Q9HD87 102 aa10.76□□□□□ -0.69
CCDC113-201ENST00000219299 LSG1Q9H089 658 aaKnown RBP10.75□□□□□ -0.69
CCDC113-201ENST00000219299 RNF181Q9P0P0 153 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 SAMM50Q9Y512 469 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 PPP1R12BO60237 982 aaPredicted RBP10.75□□□□□ -0.69
CCDC113-201ENST00000219299 EPS15P42566 896 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 TM6SF1Q9BZW5 370 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 TCP11L1Q9NUJ3 509 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 TMOD4Q9NZQ9 345 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 CGNQ9P2M7 1197 aaKnown RBP10.75□□□□□ -0.69
CCDC113-201ENST00000219299 CSADQ9Y600 493 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 SYCE3A1L190 88 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 CALML3P27482 149 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 ADCK5Q3MIX3 580 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 SERPINB13Q9UIV8 391 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 TNKSO95271 1327 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 CBFA2T2O43439 604 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 BAG4O95429 457 aaKnown RBP10.75□□□□□ -0.69
CCDC113-201ENST00000219299 FSIP1Q8NA03 581 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 UBXN4Q92575 508 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 PRM3Q9NNZ6 103 aa10.75□□□□□ -0.69
CCDC113-201ENST00000219299 PLEKHG2Q9H7P9 1386 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 SPDYE3A6NKU9 549 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 DCAF15Q66K64 600 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 TMCO3Q6UWJ1 677 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 RGPD8O14715 1765 aaPredicted RBP10.74□□□□□ -0.69
CCDC113-201ENST00000219299 NALCNQ8IZF0 1738 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 SERPINC1P01008 464 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 SYT1P21579 422 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 TBC1D10BQ4KMP7 808 aaPredicted RBP10.74□□□□□ -0.69
CCDC113-201ENST00000219299 OTUD7BQ6GQQ9 843 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 TDRD3Q9H7E2 651 aaKnown RBP10.74□□□□□ -0.69
CCDC113-201ENST00000219299 RBM28Q9NW13 759 aaKnown RBP10.74□□□□□ -0.69
CCDC113-201ENST00000219299 CFAP100Q494V2 611 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 MTFR1LQ9H019 292 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 EPB41L2O43491 1005 aaKnown RBP10.74□□□□□ -0.69
CCDC113-201ENST00000219299 GNA11P29992 359 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 RFX5P48382 616 aaPredicted RBP10.74□□□□□ -0.69
CCDC113-201ENST00000219299 FCHSD1Q86WN1 690 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 ZNF654Q8IZM8 581 aa10.74□□□□□ -0.69
CCDC113-201ENST00000219299 LRRC47Q8N1G4 583 aaKnown RBP10.74□□□□□ -0.69
CCDC113-201ENST00000219299 STRBPQ96SI9 672 aaKnown RBP10.74□□□□□ -0.69
CCDC113-201ENST00000219299 CMTR1Q8N1G2 835 aaKnown RBP10.73□□□□□ -0.69
CCDC113-201ENST00000219299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCDC113-201ENST00000219299 INTS4Q96HW7 963 aaKnown RBP10.73□□□□□ -0.69
CCDC113-201ENST00000219299 MARCKSP29966 332 aaPredicted RBP10.73□□□□□ -0.69
CCDC113-201ENST00000219299 ADD1P35611 737 aaKnown RBP10.73□□□□□ -0.69
CCDC113-201ENST00000219299 DNM1Q05193 864 aaKnown RBP10.73□□□□□ -0.69
CCDC113-201ENST00000219299 STIM1Q13586 685 aa10.73□□□□□ -0.69
CCDC113-201ENST00000219299 MIGA2Q7L4E1 593 aa10.73□□□□□ -0.69
CCDC113-201ENST00000219299 PNMA1Q8ND90 353 aa10.73□□□□□ -0.69
CCDC113-201ENST00000219299 PIK3C2AO00443 1686 aa10.73□□□□□ -0.69
CCDC113-201ENST00000219299 UTYO14607 1347 aa10.73□□□□□ -0.69
CCDC113-201ENST00000219299 CRKP46108 304 aa10.73□□□□□ -0.69
CCDC113-201ENST00000219299 ICA1Q05084 483 aa10.73□□□□□ -0.69
CCDC113-201ENST00000219299 DYNLL2Q96FJ2 89 aa10.73□□□□□ -0.69
CCDC113-201ENST00000219299 ZSCAN10Q96SZ4 725 aaPredicted RBP10.73□□□□□ -0.69
CCDC113-201ENST00000219299 NFAT5O94916 1531 aa10.73□□□□□ -0.69
CCDC113-201ENST00000219299 DACH1Q9UI36 760 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 TRIM75PA6NK02 468 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 JAK2O60674 1132 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 GOLGA6L7A0A1B0GV03 622 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 F13A1P00488 732 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 IDEP14735 1019 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 IBSPP21815 317 aaPredicted RBP10.72□□□□□ -0.69
CCDC113-201ENST00000219299 ZNF827Q17R98 1081 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 ABCB5Q2M3G0 1257 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 GRIPAP1Q4V328 841 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 SLC10A5Q5PT55 438 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 CNNM3Q8NE01 707 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 GOLGA6L10A6NI86 522 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 OFD1O75665 1012 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 GOLGA8HP0CJ92 632 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 MRPL12P52815 198 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms