RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SYNCQ9H7C4 482 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 LMBRD1Q9NUN5 540 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 SSX2IPQ9Y2D8 614 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 SLC27A2O14975 620 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 EVI5O60447 810 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 INPP5BP32019 993 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 PUM3Q15397 648 aaKnown RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 C10orf76Q5T2E6 689 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 INTS8Q75QN2 995 aaKnown RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 MICALL1Q8N3F8 863 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 LEO1Q8WVC0 666 aaPredicted RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 WWC3Q9ULE0 1092 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 BZW2Q9Y6E2 419 aaKnown RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 GUCY1B3Q02153 619 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 PARP10Q53GL7 1025 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 P3H4Q92791 437 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 SECISBP2LQ93073 1101 aaKnown RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 GOLGA8QA0A0J9YX86 632 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 GOLGA8OA6NCC3 632 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 GOLGA8NF8WBI6 632 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 FAM13AO94988 1023 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 LMOD1P29536 600 aaPredicted RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 POSTNQ15063 836 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 LIN9Q5TKA1 542 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 CEP120Q8N960 986 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 FAM81BQ96LP2 452 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 METTL22Q9BUU2 404 aaPredicted RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 NT5C3AQ9H0P0 336 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 A0A1W2PQ27 194 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 A0A1W2PQ64 194 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 A0A1W2PQD8 194 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 CHL1O00533 1208 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 LIG1P18858 919 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 SMTNP53814 917 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 PPP1R7Q15435 360 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 CDAN1Q8IWY9 1227 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 RETREG2Q8NC44 543 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 PLBD2Q8NHP8 589 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 IWS1Q96ST2 819 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 PANK2Q9BZ23 570 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 NEXMIFQ5QGS0 1516 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 CARMIL3Q8ND23 1372 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 N4BP1O75113 896 aaKnown RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 STK10O94804 968 aaKnown RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 ZNF202O95125 648 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 NCBP1Q09161 790 aaKnown RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 LGSNQ5TDP6 509 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 KRBA2Q6ZNG9 492 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 MPNDQ8N594 471 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 RABGGTAQ92696 567 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 OSBPL3Q9H4L5 887 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 RNF14Q9UBS8 474 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 GUCA1BQ9UMX6 200 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 EXOC5O00471 708 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 BCRP11274 1271 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 FANCCQ00597 558 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 ZBTB16Q05516 673 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 CCDC62Q6P9F0 684 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 SRGAP1Q7Z6B7 1085 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 GRK7Q8WTQ7 553 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 DDX21Q9NR30 783 aaKnown RBP eCLIP4.92□□□□□ -1.62
CHD9-201ENST00000219084 ZHX1Q9UKY1 873 aaPredicted RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 MED23Q9ULK4 1368 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 SLC9C2Q5TAH2 1124 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 SYT10Q6XYQ8 523 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 GSTA5Q7RTV2 222 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 KRT25Q7Z3Z0 450 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 C8orf58Q8NAV2 365 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 IP6K1Q92551 441 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 ATP6V0A2Q9Y487 856 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 SOS2Q07890 1332 aaPredicted RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 NUTM2BA6NNL0 878 aaPredicted RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 NUTM2EB1AL46 878 aaPredicted RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 PARP1P09874 1014 aaKnown RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 AFMP43652 599 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 HEATR3Q7Z4Q2 680 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 TRMT2AQ8IZ69 625 aaKnown RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 MIPOL1Q8TD10 442 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 APPBP2Q92624 585 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 TYW1Q9NV66 732 aaKnown RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 MAP7D1Q3KQU3 841 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 BICD1Q96G01 975 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 TMOD4Q9NZQ9 345 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 LCMT1Q9UIC8 334 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 ERVK-7P63135 1459 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 PLA2R1Q13018 1463 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 PXDNLA1KZ92 1463 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 CYP7A1P22680 504 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 DENND2CQ68D51 928 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 GPATCH11Q8N954 259 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 RIOK3O14730 519 aaKnown RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 YWHAEP62258 255 aaKnown RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 TMEM87AQ8NBN3 555 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 ZC3H15Q8WU90 426 aaKnown RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 CBX8Q9HC52 389 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 TXNDC16Q9P2K2 825 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 NDUFAB1O14561 156 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 GMNNO75496 209 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 TRAPPC10P48553 1259 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 RNASELQ05823 741 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms