RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 NFE2L3Q9Y4A8 694 aa9.52□□□□□ -0.89
CDC27-201ENST00000066544 IGHMBP2P38935 993 aaKnown RBP9.52□□□□□ -0.89
CDC27-201ENST00000066544 ARID4AP29374 1257 aaPredicted RBP9.51□□□□□ -0.89
CDC27-201ENST00000066544 EVX2Q03828 476 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 HPSEQ9Y251 543 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 CUTAO60888 179 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 GTF2E1P29083 439 aaPredicted RBP9.51□□□□□ -0.89
CDC27-201ENST00000066544 DYNLL1P63167 89 aaKnown RBP9.51□□□□□ -0.89
CDC27-201ENST00000066544 RESP18Q5W5W9 173 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 ADGRA1Q86SQ6 560 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 ZNF654Q8IZM8 581 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 EPC1Q9H2F5 836 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 MYO5AQ9Y4I1 1855 aaKnown RBP9.51□□□□□ -0.89
CDC27-201ENST00000066544 FMR1Q06787 632 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDC27-201ENST00000066544 NOM1Q5C9Z4 860 aaKnown RBP9.51□□□□□ -0.89
CDC27-201ENST00000066544 SMYD4Q8IYR2 804 aaPredicted RBP9.51□□□□□ -0.89
CDC27-201ENST00000066544 DESI2Q9BSY9 194 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 CGNQ9P2M7 1197 aaKnown RBP9.51□□□□□ -0.89
CDC27-201ENST00000066544 IMPACTQ9P2X3 320 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 PRDM4Q9UKN5 801 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 TUBE1Q9UJT0 475 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 TNS2Q63HR2 1409 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 PPP6R2O75170 966 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 IFNAR1P17181 557 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 ST7Q9NRC1 585 aa9.51□□□□□ -0.89
CDC27-201ENST00000066544 SAMSN1Q9NSI8 373 aaKnown RBP9.51□□□□□ -0.89
CDC27-201ENST00000066544 PKD1L3Q7Z443 1732 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 MMP1P03956 469 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 FGFR2P21802 821 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 CHRNDQ07001 517 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 SGMS1Q86VZ5 419 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 FANCBQ8NB91 859 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 KRT23Q9C075 422 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 V9GY48 417 aaPredicted RBP9.5□□□□□ -0.89
CDC27-201ENST00000066544 TNKSO95271 1327 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 FMNL1O95466 1100 aaPredicted RBP9.5□□□□□ -0.89
CDC27-201ENST00000066544 POSTNQ15063 836 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 ZNF771Q7L3S4 317 aaPredicted RBP9.5□□□□□ -0.89
CDC27-201ENST00000066544 EPSTI1Q96J88 318 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 MAN1B1Q9UKM7 699 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 MROH5Q6ZUA9 1318 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 STRCP1A6NGW2 1772 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 LIFRP42702 1097 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 KARSQ15046 597 aaKnown RBP9.5□□□□□ -0.89
CDC27-201ENST00000066544 TICAM2Q86XR7 235 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 ZSWIM4Q9H7M6 989 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 EARS2Q5JPH6 523 aaKnown RBP9.5□□□□□ -0.89
CDC27-201ENST00000066544 ZNF34Q8IZ26 560 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 SMARCE1Q969G3 411 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 ERO1AQ96HE7 468 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 CSRNP2Q9H175 543 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 DCCP43146 1447 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
CDC27-201ENST00000066544 PPARAQ07869 468 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 ZNF174Q15697 407 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 CNNM2Q9H8M5 875 aa9.5□□□□□ -0.89
CDC27-201ENST00000066544 IKBKBO14920 756 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 IL6STP40189 918 aaPredicted RBP9.49□□□□□ -0.89
CDC27-201ENST00000066544 ARHGAP29Q52LW3 1261 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 CRACR2BQ8N4Y2 399 aaPredicted RBP9.49□□□□□ -0.89
CDC27-201ENST00000066544 MNS1Q8NEH6 495 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 INTS13Q9NVM9 706 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 WDR19Q8NEZ3 1342 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 LAMB4A4D0S4 1761 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 PLEKHA8P1O95397 391 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 BPIFA3Q9BQP9 254 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 CCDC152Q4G0S7 254 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 ZNF397Q8NF99 534 aaPredicted RBP9.49□□□□□ -0.89
CDC27-201ENST00000066544 TIGD1Q96MW7 591 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 CARD6Q9BX69 1037 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 WNT7AO00755 349 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 CBFA2T2O43439 604 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 NMT2O60551 498 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 GNG11P61952 73 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 ETF1P62495 437 aaKnown RBP9.49□□□□□ -0.89
CDC27-201ENST00000066544 WASF1Q92558 559 aa9.49□□□□□ -0.89
CDC27-201ENST00000066544 FBXO2Q9UK22 296 aaPredicted RBP9.49□□□□□ -0.89
CDC27-201ENST00000066544 ABCC12Q96J65 1359 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
CDC27-201ENST00000066544 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
CDC27-201ENST00000066544 FAM47AQ5JRC9 791 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
CDC27-201ENST00000066544 OGFRQ9NZT2 677 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 NUP188Q5SRE5 1749 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 MAGEB6P1A0A0J9YX57 407 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 DMTNQ08495 405 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 MTF1Q14872 753 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 C3orf67Q6ZVT6 689 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 VSTM4Q8IW00 320 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 IRX2Q9BZI1 471 aaPredicted RBP9.48□□□□□ -0.89
CDC27-201ENST00000066544 CCDC87Q9NVE4 849 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 DEXIO95424 95 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 PTPREP23469 700 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 CDC25AP30304 524 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 ABCC6O95255 1503 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 AKAP11Q9UKA4 1901 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 ALX1Q15699 326 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 RILPL1Q5EBL4 403 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 ZNF512BQ96KM6 892 aaPredicted RBP9.48□□□□□ -0.89
CDC27-201ENST00000066544 TFCP2L1Q9NZI6 479 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms