RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TTC39AQ5SRH9 613 aa19.48■□□□□ 0.71
ERCC1-201ENST00000013807 PROCA1Q8NCQ7 364 aaPredicted RBP19.48■□□□□ 0.71
ERCC1-201ENST00000013807 SH3TC2Q8TF17 1288 aa19.48■□□□□ 0.71
ERCC1-201ENST00000013807 PI4KBQ9UBF8 816 aa19.48■□□□□ 0.71
ERCC1-201ENST00000013807 AGTPBP1Q9UPW5 1226 aa19.48■□□□□ 0.71
ERCC1-201ENST00000013807 MYH1P12882 1939 aa19.48■□□□□ 0.71
ERCC1-201ENST00000013807 CAP2P40123 477 aa19.47■□□□□ 0.71
ERCC1-201ENST00000013807 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
ERCC1-201ENST00000013807 NAA16Q6N069 864 aaPredicted RBP19.47■□□□□ 0.71
ERCC1-201ENST00000013807 TEX11Q8IYF3 940 aa19.47■□□□□ 0.71
ERCC1-201ENST00000013807 SH3RF3Q8TEJ3 882 aaPredicted RBP19.47■□□□□ 0.71
ERCC1-201ENST00000013807 DBNLQ9UJU6 430 aaKnown RBP19.47■□□□□ 0.71
ERCC1-201ENST00000013807 FMNL1O95466 1100 aaPredicted RBP19.46■□□□□ 0.71
ERCC1-201ENST00000013807 FCGRTP55899 365 aa19.46■□□□□ 0.71
ERCC1-201ENST00000013807 SLC4A8Q2Y0W8 1093 aa19.46■□□□□ 0.71
ERCC1-201ENST00000013807 TMED8Q6PL24 325 aaPredicted RBP19.46■□□□□ 0.71
ERCC1-201ENST00000013807 ITPRIPQ8IWB1 547 aa19.46■□□□□ 0.71
ERCC1-201ENST00000013807 ZNF280CQ8ND82 737 aa19.46■□□□□ 0.71
ERCC1-201ENST00000013807 EAF2Q96CJ1 260 aaPredicted RBP19.46■□□□□ 0.71
ERCC1-201ENST00000013807 GCC1Q96CN9 775 aa19.46■□□□□ 0.71
ERCC1-201ENST00000013807 NOL10Q9BSC4 688 aaKnown RBP19.46■□□□□ 0.71
ERCC1-201ENST00000013807 C1orf115Q9H7X2 142 aa19.46■□□□□ 0.71
ERCC1-201ENST00000013807 SNRKQ9NRH2 765 aa19.46■□□□□ 0.71
ERCC1-201ENST00000013807 TRIM75PA6NK02 468 aa19.45■□□□□ 0.7
ERCC1-201ENST00000013807 GRK4P32298 578 aa19.45■□□□□ 0.7
ERCC1-201ENST00000013807 OS9Q13438 667 aaPredicted RBP19.45■□□□□ 0.7
ERCC1-201ENST00000013807 RRP1BQ14684 758 aaKnown RBP19.45■□□□□ 0.7
ERCC1-201ENST00000013807 SH3D19Q5HYK7 790 aa19.45■□□□□ 0.7
ERCC1-201ENST00000013807 CEP85Q6P2H3 762 aa19.45■□□□□ 0.7
ERCC1-201ENST00000013807 GADL1Q6ZQY3 521 aa19.45■□□□□ 0.7
ERCC1-201ENST00000013807 ADGRA1Q86SQ6 560 aa19.45■□□□□ 0.7
ERCC1-201ENST00000013807 FOXP4Q8IVH2 680 aaPredicted RBP19.45■□□□□ 0.7
ERCC1-201ENST00000013807 MYPNQ86TC9 1320 aa19.45■□□□□ 0.7
ERCC1-201ENST00000013807 FAM196BA6NMK8 535 aa19.44■□□□□ 0.7
ERCC1-201ENST00000013807 RAET1EQ8TD07 263 aa19.44■□□□□ 0.7
ERCC1-201ENST00000013807 WDR18Q9BV38 432 aa19.44■□□□□ 0.7
ERCC1-201ENST00000013807 GINM1Q9NU53 330 aa19.44■□□□□ 0.7
ERCC1-201ENST00000013807 AATFQ9NY61 560 aaKnown RBP eCLIP19.44■□□□□ 0.7
ERCC1-201ENST00000013807 PCDH10Q9P2E7 1040 aa19.44■□□□□ 0.7
ERCC1-201ENST00000013807 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.44■□□□□ 0.7
ERCC1-201ENST00000013807 USP17L5A8MUK1 530 aa19.43■□□□□ 0.7
ERCC1-201ENST00000013807 ZAP70P43403 619 aa19.43■□□□□ 0.7
ERCC1-201ENST00000013807 SPP2Q13103 211 aa19.43■□□□□ 0.7
ERCC1-201ENST00000013807 IRF5Q13568 498 aa19.43■□□□□ 0.7
ERCC1-201ENST00000013807 CERS3Q8IU89 383 aa19.43■□□□□ 0.7
ERCC1-201ENST00000013807 PXYLP1Q8TE99 480 aa19.43■□□□□ 0.7
ERCC1-201ENST00000013807 PNMA3Q9UL41 463 aa19.43■□□□□ 0.7
ERCC1-201ENST00000013807 GJB1P08034 283 aa19.42■□□□□ 0.7
ERCC1-201ENST00000013807 PRKCZQ05513 592 aa19.42■□□□□ 0.7
ERCC1-201ENST00000013807 MTFR1Q15390 333 aa19.42■□□□□ 0.7
ERCC1-201ENST00000013807 FAM110CQ1W6H9 321 aa19.42■□□□□ 0.7
ERCC1-201ENST00000013807 TREML2Q5T2D2 321 aa19.42■□□□□ 0.7
ERCC1-201ENST00000013807 CCDC84Q86UT8 332 aaPredicted RBP19.42■□□□□ 0.7
ERCC1-201ENST00000013807 ERC1Q8IUD2 1116 aa19.42■□□□□ 0.7
ERCC1-201ENST00000013807 SLAIN1Q8ND83 568 aa19.42■□□□□ 0.7
ERCC1-201ENST00000013807 NKX2-3Q8TAU0 364 aa19.42■□□□□ 0.7
ERCC1-201ENST00000013807 PIH1D3Q9NQM4 214 aaKnown RBP19.42■□□□□ 0.7
ERCC1-201ENST00000013807 FLT1P17948 1338 aa19.42■□□□□ 0.7
ERCC1-201ENST00000013807 ASNSP08243 561 aa19.41■□□□□ 0.7
ERCC1-201ENST00000013807 CAPN2P17655 700 aa19.41■□□□□ 0.7
ERCC1-201ENST00000013807 GJA8P48165 433 aa19.41■□□□□ 0.7
ERCC1-201ENST00000013807 GCLCP48506 637 aaPredicted RBP19.41■□□□□ 0.7
ERCC1-201ENST00000013807 SMCR8Q8TEV9 937 aaPredicted RBP19.41■□□□□ 0.7
ERCC1-201ENST00000013807 TGFBRAP1Q8WUH2 860 aa19.41■□□□□ 0.7
ERCC1-201ENST00000013807 CCDC8Q9H0W5 538 aaPredicted RBP19.41■□□□□ 0.7
ERCC1-201ENST00000013807 DNAJC18Q9H819 358 aa19.41■□□□□ 0.7
ERCC1-201ENST00000013807 AS3MTQ9HBK9 375 aa19.41■□□□□ 0.7
ERCC1-201ENST00000013807 TLR7Q9NYK1 1049 aaKnown RBP19.41■□□□□ 0.7
ERCC1-201ENST00000013807 GABRQQ9UN88 632 aa19.41■□□□□ 0.7
ERCC1-201ENST00000013807 MS4A1P11836 297 aa19.4■□□□□ 0.7
ERCC1-201ENST00000013807 PABPC4Q13310 644 aaKnown RBP eCLIP19.4■□□□□ 0.73e-6■■□□□ 13.7
ERCC1-201ENST00000013807 UBE2Q1Q7Z7E8 422 aa19.4■□□□□ 0.7
ERCC1-201ENST00000013807 SHISA4Q96DD7 197 aa19.4■□□□□ 0.7
ERCC1-201ENST00000013807 HOXA7P31268 230 aaPredicted RBP19.39■□□□□ 0.69
ERCC1-201ENST00000013807 HMGCS2P54868 508 aa19.39■□□□□ 0.69
ERCC1-201ENST00000013807 UBXN2AP68543 259 aa19.39■□□□□ 0.69
ERCC1-201ENST00000013807 HSP90AB4PQ58FF6 505 aa19.39■□□□□ 0.69
ERCC1-201ENST00000013807 PLXNB2O15031 1838 aa19.39■□□□□ 0.69
ERCC1-201ENST00000013807 C19orf81C9J6K1 198 aa19.38■□□□□ 0.69
ERCC1-201ENST00000013807 ECM2O94769 699 aaPredicted RBP19.38■□□□□ 0.69
ERCC1-201ENST00000013807 CCL5P13501 91 aa19.38■□□□□ 0.69
ERCC1-201ENST00000013807 FLT3LGP49771 235 aa19.38■□□□□ 0.69
ERCC1-201ENST00000013807 BACE1P56817 501 aa19.38■□□□□ 0.69
ERCC1-201ENST00000013807 MAPKAPK5Q8IW41 473 aa19.38■□□□□ 0.69
ERCC1-201ENST00000013807 ANKRD13CQ8N6S4 541 aa19.38■□□□□ 0.69
ERCC1-201ENST00000013807 PANK1Q8TE04 598 aa19.38■□□□□ 0.69
ERCC1-201ENST00000013807 PALD1Q9ULE6 856 aa19.38■□□□□ 0.69
ERCC1-201ENST00000013807 TNPO2O14787 897 aaKnown RBP19.37■□□□□ 0.69
ERCC1-201ENST00000013807 ADCY3O60266 1144 aa19.37■□□□□ 0.69
ERCC1-201ENST00000013807 MYCP01106 439 aaPredicted RBP19.37■□□□□ 0.69
ERCC1-201ENST00000013807 CYP7A1P22680 504 aa19.37■□□□□ 0.69
ERCC1-201ENST00000013807 JAG1P78504 1218 aa19.37■□□□□ 0.69
ERCC1-201ENST00000013807 RPAP2Q8IXW5 612 aaPredicted RBP19.37■□□□□ 0.69
ERCC1-201ENST00000013807 ASCC2Q9H1I8 757 aaPredicted RBP19.37■□□□□ 0.69
ERCC1-201ENST00000013807 EXOC6BQ9Y2D4 811 aa19.37■□□□□ 0.69
ERCC1-201ENST00000013807 DDX60LQ5H9U9 1706 aaKnown RBP19.37■□□□□ 0.69
ERCC1-201ENST00000013807 DYNLL1P63167 89 aaKnown RBP19.36■□□□□ 0.69
ERCC1-201ENST00000013807 HABP4Q5JVS0 413 aaKnown RBP19.36■□□□□ 0.69
ERCC1-201ENST00000013807 TATDN1Q6P1N9 297 aa19.36■□□□□ 0.69
ERCC1-201ENST00000013807 RHPN1Q8TCX5 695 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms