RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Zbtb22Q9Z0G7 638 aa16.6■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Ano3A2AHL1 981 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 PnnO35691 725 aaKnown RBP16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Grem2O88273 168 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Tgfb2P27090 414 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Foxp1P58462 705 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Cdkl5Q3UTQ8 938 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Myl10Q62082 202 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Fam170aQ66LM6 333 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 DymQ8CHY3 669 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Plcd3Q8K2J0 785 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Zkscan7E9PVW1 718 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Tpm3P21107 285 aaKnown RBP16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 CgnP59242 1191 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Cfap157Q0VFX2 523 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Prpf38aQ4FK66 312 aaKnown RBP16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Ddx31Q6NZQ2 687 aaKnown RBP16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Ppp2r5bQ6PD28 497 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Ripk4Q9ERK0 786 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Suclg2Q9Z2I8 433 aa16.59■□□□□ 0.25
Ssr1-204ENSMUST00000225319 Slc1a4O35874 532 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Abl1P00520 1123 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 DnttP09838 530 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Cplx2P84086 134 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Cyp2c67Q569X9 491 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 DaglaQ6WQJ1 1044 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Ankrd13aQ80UP5 588 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 U2af1l4Q8BGJ9 220 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Pus7lQ8CE46 702 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Myl6bQ8CI43 207 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Cd248Q91V98 765 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Zbed3Q9D0L1 228 aa16.58■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Flt1P35969 1333 aa16.57■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Aox4Q3TYQ9 1336 aa16.57■□□□□ 0.24
Ssr1-204ENSMUST00000225319 LyarQ08288 388 aaKnown RBP16.57■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Znf667Q2TL60 609 aa16.57■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Gpr101Q80T62 511 aa16.57■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Mtmr3Q8K296 1196 aa16.57■□□□□ 0.24
Ssr1-204ENSMUST00000225319 HibadhQ99L13 335 aaKnown RBP16.57■□□□□ 0.24
Ssr1-204ENSMUST00000225319 TnmdQ9EP64 317 aa16.57■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Mx2Q9WVP9 655 aa16.57■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Zfp646Q6NV66 1788 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Fam186bD3Z420 943 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Arid4aF8VPQ2 1261 aaKnown RBP16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Tyro3P55144 880 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Ubash3aQ3V3E1 624 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Snx13Q6PHS6 957 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Zfp317Q8C0Q5 607 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Terf2ipQ91VL8 393 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Mmel1Q9JLI3 765 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Lins1Q3U1D0 764 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Pramel6Q810Y9 485 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Xrcc4Q924T3 326 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Txnrd3Q99MD6 652 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Hmgn5Q9JL35 406 aa16.56■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Prr16A3KMN5 304 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Cfap58B2RW38 873 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 NcapgE9PWG6 1004 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Ftl1P29391 183 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 MyrflQ3UN70 904 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 GnptabQ69ZN6 1235 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 PrimpolQ6P1E7 537 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Slitrk3Q810B9 980 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 SpidrQ8BGX7 933 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Ranbp6Q8BIV3 1105 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Ndufv1Q91YT0 464 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Rai14Q9EP71 979 aaKnown RBP16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Cdc45Q9Z1X9 566 aa16.55■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Calm1P0DP26 149 aaKnown RBP16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Calm2P0DP27 149 aaKnown RBP16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Calm3P0DP28 149 aaKnown RBP16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Fdx1P46656 188 aa16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Npr3P70180 536 aa16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Llgl2Q3TJ91 1027 aa16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Tmtc2Q56A06 836 aa16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 CrkQ64010 304 aa16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Pip5kl1Q6U7H8 395 aa16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Bicd2Q921C5 820 aa16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Dynll2Q9D0M5 89 aa16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Col2a1P28481 1487 aa16.54■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Peak1Q69Z38 1735 aa16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Gm36210A0A1B0GS00 229 aa16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 1700113H08RikE9Q9Q5 327 aa16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Dnajc2P54103 621 aaKnown RBP16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Aak1Q3UHJ0 959 aa16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Slc10a5Q5PT54 434 aa16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Lamc2Q61092 1191 aa16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Kif1bpQ6ZPU9 617 aa16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Mxd3Q80US8 206 aa16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Rtn1Q8K0T0 780 aa16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Plxnb2B2RXS4 1842 aa16.53■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Mctp1E9PV86 951 aa16.52■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Fam178bQ24JP3 464 aa16.52■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Ncbp1Q3UYV9 790 aaKnown RBP16.52■□□□□ 0.24
Ssr1-204ENSMUST00000225319 LrmpQ60664 539 aa16.52■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Oxsr1Q6P9R2 527 aa16.52■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Ccdc82Q6PG04 518 aa16.52■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Cdca8Q8BHX3 289 aa16.52■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Trmt2aQ8BNV1 574 aaKnown RBP16.52■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Nop14Q8R3N1 860 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms