RNA–Protein interactions for RNA: ENSMUST00000163419.7

Scaf4-202, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scaf4, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-202ENSMUST00000163419 NyxP83503 476 aa13.04□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Pde1cQ64338 706 aa13.04□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Ctdp1Q7TSG2 960 aa13.04□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Fam84aQ9D650 292 aa13.04□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Polr2dQ9D7M8 142 aaKnown RBP13.04□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Bnip3lQ9Z2F7 218 aa13.04□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Xrn1P97789 1719 aaKnown RBP13.04□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Sycp2lA0A0M3U1B0 842 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Tnni3P48787 211 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Gng11P61953 73 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Islr2Q5RKR3 745 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Utp18Q5SSI6 552 aaKnown RBP13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Ccdc93Q7TQK5 629 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Pcdhb2Q91Y00 799 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Abcb4P21440 1276 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Ccdc85aQ5SP85 500 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Fam196bQ6GQV1 535 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Kif1bpQ6ZPU9 617 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Bbs9Q811G0 885 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Kiaa0319lQ8K135 1048 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 NkapQ9D0F4 415 aaKnown RBP13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Myo3aQ8K3H5 1613 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Myo5cE9Q1F5 1742 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 MyocO70624 490 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 LdhbP16125 334 aaKnown RBP13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Serpinc1P32261 465 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Arhgef2Q60875 985 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Kdm1aQ6ZQ88 853 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Asap2Q7SIG6 958 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 EhhadhQ9DBM2 718 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Trmt112Q9DCG9 125 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Arhgap33Q80YF9 1305 aa13.03□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Gucy1b3O54865 620 aa13.02□□□□□ -0.32
Scaf4-202ENSMUST00000163419 DnttP09838 530 aa13.02□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Tmtc2Q56A06 836 aa13.02□□□□□ -0.32
Scaf4-202ENSMUST00000163419 CnstQ8CBC4 711 aa13.02□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Trim52Q8CDV4 233 aa13.02□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Acot11Q8VHQ9 594 aa13.02□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Gpbp1Q6NXH3 473 aaKnown RBP13.02□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Gpr101Q80T62 511 aa13.02□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Cyp27a1Q9DBG1 533 aa13.02□□□□□ -0.32
Scaf4-202ENSMUST00000163419 IcoslgQ9JHJ8 322 aa13.02□□□□□ -0.32
Scaf4-202ENSMUST00000163419 Gm1993A6X8I0 212 aa13.02□□□□□ -0.33
Scaf4-202ENSMUST00000163419 SlxD3Z347 212 aa13.02□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Hmgb1P63158 215 aaKnown RBP13.02□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Fam13bQ8K2H3 851 aa13.02□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Lrp2bpQ9D4C6 346 aa13.02□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Pcdhb9E9Q5G2 828 aa13.02□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Uri1Q3TLD5 531 aa13.02□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Gas7Q60780 421 aa13.02□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Cyp26a1O55127 497 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 PparaP23204 468 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Ces3aQ63880 571 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Arhgef18Q6P9R4 1021 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Tmem87aQ8BXN9 555 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Ces3bQ8VCU1 571 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Galnt15Q9D2N8 638 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Chaf1aQ9QWF0 911 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Psmc2P46471 433 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Tax1bp1Q3UKC1 814 aaKnown RBP13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Abcf1Q6P542 837 aaKnown RBP13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 IqcgQ80W32 419 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Tcp11l1Q8BTG3 509 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Appl2Q8K3G9 662 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Kcnh3Q9WVJ0 1095 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Ifi207E9Q3L4 978 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Kif23E9Q5G3 953 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Sema6bO54951 886 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Vti1aO89116 217 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Jade3Q6IE82 823 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Ccdc189Q6NZQ0 333 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Senp6Q6P7W0 1132 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Ano10Q8BH79 659 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Ube3bQ9ES34 1070 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Usp21Q9QZL6 566 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Trip6Q9Z1Y4 480 aa13.01□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Arhgef10lA2AWP8 1280 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Tyro3P55144 880 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Kctd1Q5M956 257 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Cep135Q6P5D4 1140 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Fbxo11Q7TPD1 930 aaKnown RBP13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Nacc1Q7TSZ8 514 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Trim56Q80VI1 734 aaKnown RBP13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Sumf1Q8R0F3 372 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 WaslQ91YD9 501 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Dynll2Q9D0M5 89 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Uso1Q9Z1Z0 959 aaKnown RBP13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Gm15262A0A140LIQ5 728 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 McamQ8R2Y2 648 aaKnown RBP13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Tspyl1O88852 379 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Rpl13P47963 211 aaKnown RBP13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 GabpaQ00422 454 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Otud6bQ8K2H2 294 aa13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Ccdc12Q8R344 166 aaKnown RBP13□□□□□ -0.33
Scaf4-202ENSMUST00000163419 FanccP50652 591 aa12.99□□□□□ -0.33
Scaf4-202ENSMUST00000163419 GnptabQ69ZN6 1235 aa12.99□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Tmem132dQ76HP3 1097 aa12.99□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Pramel6Q810Y9 485 aa12.99□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Znf526Q8BI66 675 aa12.99□□□□□ -0.33
Scaf4-202ENSMUST00000163419 Hexim1Q8R409 356 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms