RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Cep89Q9CZX2 791 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Lama4P97927 1816 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 LtbrP50284 415 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Brinp3Q499E0 766 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Miga2Q8BK03 593 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Q8CEZ4 452 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Cyp2j7A0A140T8U1 504 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 SsbP32067 415 aaKnown RBP13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Snrpa1P57784 255 aaKnown RBP13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Cers3Q1A3B0 383 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Cnnm2Q3TWN3 875 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Tbx2Q60707 711 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Slf2Q6P9P0 1278 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Nme8Q715T0 586 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Abtb2Q7TQI7 1024 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Rbm28Q8CGC6 750 aaKnown RBP13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Ubac1Q8VDI7 409 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Chaf1aQ9QWF0 911 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Dennd3A2RT67 1274 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Bnip3O55003 187 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 EmbP21995 330 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Casp1P29452 402 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Psmb7P70195 277 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Znf496Q5SXI5 585 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Lamb3Q61087 1168 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Taf6lQ8R2K4 616 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Rapgef4Q9EQZ6 1011 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Tbc1d8bA3KGB4 1114 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Cyp2c23E9Q5K4 494 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Spata5Q3UMC0 893 aaKnown RBP13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Cyp24a1Q64441 514 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Maats1Q8BRC6 783 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Wasf1Q8R5H6 559 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Tc2nQ91XT6 489 aa13.13□□□□□ -0.31
Vps54-202ENSMUST00000109578 Lcmt1A0A0U1RNF2 332 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 A0A1Y7VML8 143 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Acad12D3Z7X0 555 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Q3TYL0 343 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Tada3Q8R0L9 432 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Ndufb9Q9CQJ8 179 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Stag1Q9D3E6 1258 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Prss40A6H6T1 365 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Ncoa7Q6DFV7 943 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 HelbQ6NVF4 1074 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Krt23Q99PS0 422 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Fam114a1Q9D281 569 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 CpvlQ9D3S9 478 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Lonp2Q9DBN5 852 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Sipa1l3G3X9J0 1776 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Zscan20B2KFW1 1030 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Myl3P09542 204 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Jmjd4Q8BFT6 427 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Gga3Q8BMI3 718 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Cep85Q8BMK0 761 aa13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Apobec3Q99J72 440 aaKnown RBP13.12□□□□□ -0.31
Vps54-202ENSMUST00000109578 Sun3Q5SS91 320 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Enox1Q8BHR2 643 aaKnown RBP13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 VmacQ8BP01 174 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Cd209bQ8CJ91 325 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Epb41l2O70318 988 aaKnown RBP13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Dynll1P63168 89 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Sept9Q80UG5 583 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Slc39a11Q8BWY7 342 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Pde5aQ8CG03 865 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Myo3bQ1EG27 1305 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Rsph10bE9PYQ0 876 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 PparaP23204 468 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Adssl1P28650 457 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Tbc1d5Q80XQ2 815 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Olfm5Q8BU90 496 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Paf1Q8K2T8 535 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Golgb1E9PVZ8 3238 aa13.11□□□□□ -0.31
Vps54-202ENSMUST00000109578 Gm43738A0A0G2JEA5 862 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Gjb4Q02738 266 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Ric8aQ3TIR3 530 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Esco1Q69Z69 843 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Lrrd1Q8C0R9 853 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 TbcaP48428 108 aaKnown RBP13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Q8K2W9 541 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Nod2Q8K3Z0 1020 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Trim34aQ99PP6 485 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Tpm3-rs7D3Z2H9 248 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Nmt2O70311 529 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Kcnj4P52189 445 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Dusp9Q7TNL7 452 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Vstm4T1NXB5 319 aa13.1□□□□□ -0.31
Vps54-202ENSMUST00000109578 Myh7bA2AQP0 1941 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Arap2Q8BZ05 1703 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Akap11E9Q777 1895 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Dhx8A2A4P0 1244 aaKnown RBP13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Smc2Q8CG48 1191 aaKnown RBP13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Thap2Q9D305 217 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Hip1rQ9JKY5 1068 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Igsf9bE9PZ19 1328 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 4931408C20RikE9PWP9 1381 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 MetP16056 1379 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Greb1lB9EJV3 1913 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Fkbp1aP26883 108 aaKnown RBP13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Pde4dQ01063 747 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Ifit1bl2Q3U687 466 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms