RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Exosc10P56960 887 aaKnown RBP11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Thrap3Q569Z6 951 aaKnown RBP11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Rufy2Q8R4C2 606 aa11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Kdm4cQ8VCD7 1054 aa11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Myh2G3UW82 1942 aa11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 NinQ61043 2035 aa11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Vwa3bJ9JI28 736 aa11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Bap1Q99PU7 728 aa11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Mei1Q9D4I2 1268 aa11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Metap2O08663 478 aaKnown RBP11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Rps12P63323 132 aaKnown RBP11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Zbtb39Q6PDK0 712 aa11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Slc44a1Q6X893 653 aa11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ppp1r10Q80W00 888 aaKnown RBP11.63□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Elmsan1E9Q2I4 1089 aaKnown RBP11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Cyp26a1O55127 497 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Babam1Q3UI43 333 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Mdh1bQ5F204 500 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Nxf7Q80SZ6 620 aaKnown RBP11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Terb1Q8C0V1 768 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Pus7lQ8CE46 702 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Zbed3Q9D0L1 228 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Nfe2l3Q9WTM4 660 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Itgb4A2A863 1818 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Pagr1bF6V0H0 108 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Tmc4Q7TQ65 694 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 PogkQ80TC5 607 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Pagr1aQ99L02 253 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 BrapQ99MP8 591 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ccdc7Q9D541 371 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Phrf1A6H619 1682 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Lrch1P62046 709 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ctdnep1Q3TP92 244 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ces3aQ63880 571 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ces3bQ8VCU1 571 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Lrrc2Q8VDB8 371 aa11.62□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ftl1P29391 183 aa11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 1700013D24RikQ0P521 120 aa11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Zc3h15Q3TIV5 426 aaKnown RBP11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ppp1r11Q8K1L5 131 aa11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 CerkQ8K4Q7 531 aa11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 CsadQ9DBE0 493 aa11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Copb2O55029 905 aa11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Fdx1P46656 188 aa11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Znf219Q6IQX8 726 aa11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ttll12Q3UDE2 639 aa11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Lgr6Q3UVD5 967 aa11.61□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Vcam1P29533 739 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Irx3P81067 507 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Cplx2P84086 134 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Gas1Q01721 343 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Qrich1Q3UA37 777 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ube2oQ6ZPJ3 1288 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Tgm5Q9D7I9 724 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Znf287Q9EQB9 759 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Txnrd2Q9JLT4 524 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Zfp646Q6NV66 1788 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 A430078G23RikE9Q7Y4 484 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ptpn12P35831 775 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Hps6Q8BLY7 805 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ndfip2Q91ZP6 311 aa11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Rbbp6P97868 1790 aaKnown RBP11.6□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Alppl2P24823 529 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Rsph3aQ3UFY4 516 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Tmem59lQ7TNI2 337 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Zkscan1Q8BGS3 561 aaKnown RBP11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Tmod2Q9JKK7 351 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 FanccP50652 591 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Mex3cQ05A36 652 aaKnown RBP11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Rnf180Q3U827 592 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Gxylt1Q3UHH8 404 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 ErmnQ5EBJ4 281 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ddx19aQ61655 478 aaKnown RBP11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Senp6Q6P7W0 1132 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Tpcn2Q8BWC0 731 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ccdc178Q8CDV0 866 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Tubb6Q922F4 447 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Trmt112Q9DCG9 125 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Eid1Q9DCR4 169 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Zscan18E9PUD6 809 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Sept2P42208 361 aaKnown RBP11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Mybl2P48972 704 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Prr7Q3V0I2 269 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Glra4Q61603 456 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Krt74Q6IFZ9 495 aa11.59□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Gm30191A0A0U1RNT7 187 aa11.58□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 LeprP48356 1162 aa11.58□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Htatsf1Q8BGC0 757 aa11.58□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Triml1Q8BVP1 470 aa11.58□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Bola3Q8CEI1 110 aa11.58□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Zmym2Q9CU65 1376 aa11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Stac3Q8BZ71 360 aa11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Sgip1Q8VD37 806 aa11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Ubac1Q8VDI7 409 aa11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Akap8Q9DBR0 687 aaKnown RBP11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Mad1l1Q9WTX8 717 aaKnown RBP11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Znf638Q61464 1960 aaKnown RBP11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Scn9aQ62205 1984 aa11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 U2af1l4Q8BGJ9 220 aa11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Slc4a8Q8JZR6 1089 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms