RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Cyp7b1Q60991 507 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Dusp9Q7TNL7 452 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Rbm28Q8CGC6 750 aaKnown RBP13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Rbm43Q99J64 343 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Eif2ak3Q9Z2B5 1114 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Pde8bE9Q4S1 865 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Il7P10168 154 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Nek1P51954 1203 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Sun3Q5SS91 320 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Tc2nQ91XT6 489 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 PdclQ9DBX2 301 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 GdaQ9R111 454 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Trip6Q9Z1Y4 480 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Tom1O88746 492 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Atp8a2P98200 1148 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Map9Q3TRR0 646 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Prdm4Q80V63 803 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Alx1Q8C8B0 326 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Tubb4aQ9D6F9 444 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Prr5lA2AVJ5 370 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ampd3O08739 766 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ccdc174Q3U155 467 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Jmjd4Q8BFT6 427 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Nat10Q8K224 1024 aaKnown RBP13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Tmem143Q8VD26 458 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 WtapQ9ER69 396 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Med23Q80YQ2 1367 aa13.18□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Tbc1d2B1AVH7 922 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Slc4a4O88343 1079 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Prl3d1P18121 224 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 SsbP32067 415 aaKnown RBP13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Foxp1P58462 705 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Znhit6Q3UFB2 460 aaKnown RBP13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Sirt2Q8VDQ8 389 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Trim34aQ99PP6 485 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 NgdnQ9DB96 315 aaKnown RBP13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Vstm4T1NXB5 319 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Rsph10bE9PYQ0 876 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Lrrc6O88978 473 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 SfswapQ3USH5 945 aaKnown RBP13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Clec16aQ80U30 1036 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Slitrk3Q810B9 980 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Washc1Q8VDD8 475 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 ZgpatQ8VDM1 511 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Riok1Q922Q2 567 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Prc1Q99K43 603 aaKnown RBP13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ube3bQ9ES34 1070 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Zcchc17Q9ESX4 241 aaKnown RBP13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 EcsitQ9QZH6 435 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Mrvi1Q9WUX5 899 aaKnown RBP13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Mapk8ip1Q9WVI9 707 aa13.17□□□□□ -0.3
Col9a1-202ENSMUST00000088349 IntuQ059U7 942 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Slc7a1Q09143 622 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ric8aQ3TIR3 530 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Tshz1Q5DTH5 1084 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Sik1Q60670 779 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ift88Q61371 824 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Gdap1l1Q8VE33 370 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Wnk3Q80XP9 1757 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Kdm3aQ6PCM1 1323 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Prss40A6H6T1 365 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Hspa1lP16627 641 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ccdc34Q3UI66 367 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Tbx2Q60707 711 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Esco1Q69Z69 843 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ctdp1Q7TSG2 960 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Pde5aQ8CG03 865 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Taf6lQ8R2K4 616 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Krt23Q99PS0 422 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Cep89Q9CZX2 791 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 DonsonQ9QXP4 560 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ank1Q02357 1862 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Myo3bQ1EG27 1305 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 A0A1W2P6Q8 802 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Gm9048A0A1W2P7H4 802 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 A0A1W2P7S8 802 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 A0A1W2P7Z8 802 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Gm9046A0A1W2P855 802 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Prr29B1ARI9 187 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Phldb3E9QAF4 648 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Sept1P42209 366 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 LtbrP50284 415 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Arglu1Q3UL36 271 aaKnown RBP13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Cdc5lQ6A068 802 aaKnown RBP13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Adck5Q80V03 582 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Tcp11l2Q8K1H7 517 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ercc4Q9QZD4 917 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Pdcd6ipQ9WU78 869 aaKnown RBP13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 SrcapA0A087WQ44 3271 aa13.16□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Nwd2Q6P5U7 1742 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Zscan20B2KFW1 1030 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Rgs22G3UYX5 1258 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Adssl1P28650 457 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Sf3b2Q3UJB0 878 aaKnown RBP13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ccdc57Q6PHN1 1016 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Enox1Q8BHR2 643 aaKnown RBP13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 AbraQ8BUZ1 375 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Smc2Q8CG48 1191 aaKnown RBP13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Bcl2l12Q9D3J3 255 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Cnpy3Q9DAU1 276 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms