RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Ccdc39Q9D5Y1 937 aa16.61■□□□□ 0.25
Msx3-201ENSMUST00000055353 Sdc2P43407 202 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Ckap2Q3V1H1 664 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 PsdQ5DTT2 1024 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Tbx2Q60707 711 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Trak2Q6P9N8 913 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Terb1Q8C0V1 768 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Fam76aQ922G2 307 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Tab2Q99K90 693 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Frmd7A2AD83 703 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Bnip3O55003 187 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 LtbrP50284 415 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Eif5P59325 429 aaKnown RBP16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Bag1Q60739 355 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Q8CEZ4 452 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Taf6lQ8R2K4 616 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Tspyl4Q8VD63 406 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Gpr108Q91WD0 569 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Clstn1Q9EPL2 979 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Plekho1Q9JIY0 408 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Myh7bA2AQP0 1941 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Ktn1Q61595 1327 aaKnown RBP16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 FAM186AQ9D9R9 1790 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Lrp6O88572 1613 aa16.6■□□□□ 0.25
Msx3-201ENSMUST00000055353 Gng11P61953 73 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Cers3Q1A3B0 383 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Specc1lQ2KN98 1118 aaKnown RBP16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Brinp3Q499E0 766 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Ttc12Q8BW49 704 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Ankrd31A0A140LI88 1765 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Lcmt1A0A0U1RNF2 332 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Cd3dP04235 173 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Pde11aP0C1Q2 933 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 NefhP19246 1090 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Spata5Q3UMC0 893 aaKnown RBP16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Apobec3Q99J72 440 aaKnown RBP16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Iqca1Q9CUL5 857 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 FliiQ9JJ28 1271 aa16.59■□□□□ 0.25
Msx3-201ENSMUST00000055353 Prr5lA2AVJ5 370 aa16.58■□□□□ 0.25
Msx3-201ENSMUST00000055353 Gabpb2P81069 414 aa16.58■□□□□ 0.25
Msx3-201ENSMUST00000055353 Nme8Q715T0 586 aa16.58■□□□□ 0.25
Msx3-201ENSMUST00000055353 Gga3Q8BMI3 718 aa16.58■□□□□ 0.25
Msx3-201ENSMUST00000055353 Tada3Q8R0L9 432 aa16.58■□□□□ 0.25
Msx3-201ENSMUST00000055353 Tc2nQ91XT6 489 aa16.58■□□□□ 0.25
Msx3-201ENSMUST00000055353 Ndufb9Q9CQJ8 179 aa16.58■□□□□ 0.25
Msx3-201ENSMUST00000055353 Chaf1aQ9QWF0 911 aa16.58■□□□□ 0.25
Msx3-201ENSMUST00000055353 Cyp2j7A0A140T8U1 504 aa16.58■□□□□ 0.24
Msx3-201ENSMUST00000055353 Prss40A6H6T1 365 aa16.58■□□□□ 0.24
Msx3-201ENSMUST00000055353 Acad12D3Z7X0 555 aa16.58■□□□□ 0.24
Msx3-201ENSMUST00000055353 Ampd3O08739 766 aa16.58■□□□□ 0.24
Msx3-201ENSMUST00000055353 EmbP21995 330 aa16.58■□□□□ 0.24
Msx3-201ENSMUST00000055353 Znf496Q5SXI5 585 aa16.58■□□□□ 0.24
Msx3-201ENSMUST00000055353 Slc27a1Q60714 646 aa16.58■□□□□ 0.24
Msx3-201ENSMUST00000055353 Mns1Q61884 491 aa16.58■□□□□ 0.24
Msx3-201ENSMUST00000055353 Brd3Q8K2F0 726 aaKnown RBP16.58■□□□□ 0.24
Msx3-201ENSMUST00000055353 Myh6Q02566 1938 aaKnown RBP16.58■□□□□ 0.24
Msx3-201ENSMUST00000055353 A0A1Y7VML8 143 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Speer4dL7N216 212 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 SsbP32067 415 aaKnown RBP16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Psmb7P70195 277 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Q3TYL0 343 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Ncoa7Q6DFV7 943 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Drc7Q6V3W6 876 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Ubac1Q8VDI7 409 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Cep89Q9CZX2 791 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Fam114a1Q9D281 569 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Stag1Q9D3E6 1258 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Cyp2c23E9Q5K4 494 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Gjb4Q02738 266 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Ric8aQ3TIR3 530 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 HelbQ6NVF4 1074 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Abtb2Q7TQI7 1024 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Cep85Q8BMK0 761 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Slc39a11Q8BWY7 342 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Tmem143Q8VD26 458 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 ZgpatQ8VDM1 511 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Lonp2Q9DBN5 852 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Myo3bQ1EG27 1305 aa16.57■□□□□ 0.24
Msx3-201ENSMUST00000055353 Casp1P29452 402 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Snrpa1P57784 255 aaKnown RBP16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Cnnm2Q3TWN3 875 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Cyp24a1Q64441 514 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Sept9Q80UG5 583 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Miga2Q8BK03 593 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Maats1Q8BRC6 783 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Scn4aQ9ER60 1841 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 4931408C20RikE9PWP9 1381 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Igsf9bE9PZ19 1328 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Gm43738A0A0G2JEA5 862 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Dennd3A2RT67 1274 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Rsph10bE9PYQ0 876 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Adssl1P28650 457 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Dynll1P63168 89 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Lamb3Q61087 1168 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Cd209bQ8CJ91 325 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Evc2Q8K1G2 1220 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Q8K2W9 541 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 CpvlQ9D3S9 478 aa16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Nol7Q9D7Z3 254 aaKnown RBP16.56■□□□□ 0.24
Msx3-201ENSMUST00000055353 Tbc1d8bA3KGB4 1114 aa16.55■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms