RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Grin1P35438 938 aa18.39■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Q3TYL0 343 aa18.39■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Nab2Q61127 525 aa18.39■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Hspa4Q61316 841 aa18.39■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Ncoa7Q6DFV7 943 aa18.39■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Tubb2aQ7TMM9 445 aa18.39■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Tbc1d5Q80XQ2 815 aa18.39■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Tubb2bQ9CWF2 445 aa18.39■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Hdac6Q9Z2V5 1149 aa18.39■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Snrpa1P57784 255 aaKnown RBP18.38■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Znf653Q6YND2 615 aa18.38■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Suclg2Q9Z2I8 433 aa18.38■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 AW822073A0A0N4SUK1 652 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Cul4bA2A432 970 aaKnown RBP18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Dnajc25A2ALW5 357 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Map9Q3TRR0 646 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Plekha7Q3UIL6 1118 aaKnown RBP18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Ift88Q61371 824 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Cypt2Q6P924 180 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Sval3Q76I99 144 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Ctdspl2Q8BG15 465 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Terb1Q8C0V1 768 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Kcnj14Q8JZN3 434 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Nip7Q9CXK8 180 aaKnown RBP18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 IcoslgQ9JHJ8 322 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Lmbr1Q9JIT0 490 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Znf609Q8BZ47 1413 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Sdc2P43407 202 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Gng11P61953 73 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Tubb4bP68372 445 aaKnown RBP18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Anp32eP97822 260 aaKnown RBP18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Sec23aQ01405 765 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Arglu1Q3UL36 271 aaKnown RBP18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Myl10Q62082 202 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Agtpbp1Q641K1 1218 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Ift122Q6NWV3 1182 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Cep128Q8BI22 1102 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 ApobrQ8VBT6 942 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Tomm22Q9CPQ3 142 aa18.37■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Ythdc1E9Q5K9 736 aaKnown RBP18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Cyp3a25O09158 503 aa18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Brinp3Q499E0 766 aa18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Slc27a1Q60714 646 aa18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Cyp7a1Q64505 503 aa18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Dcaf5Q80T85 946 aa18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Olfm5Q8BU90 496 aa18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Lmod1Q8BVA4 595 aa18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Stac3Q8BZ71 360 aa18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 HdlbpQ8VDJ3 1268 aaKnown RBP18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Ttc14Q9CSP9 761 aa18.36■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Prr29B1ARI9 187 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Actn3O88990 900 aaKnown RBP18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 PparaP23204 468 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Gabpb2P81069 414 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Fam89aQ14BJ1 175 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Csrnp2Q8BGQ2 534 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Gimap5Q8BWF2 308 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Arhgef6Q8K4I3 771 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Cep89Q9CZX2 791 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Gm10134F6ZQC6 126 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 CrcpO35427 148 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Zhx1P70121 873 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Glis3Q6XP49 780 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Cfap45Q9D9U9 551 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Itga2bQ9QUM0 1033 aa18.35■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Zscan20B2KFW1 1030 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 PnnO35691 725 aaKnown RBP18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Slc4a4O88343 1079 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 CebpaP53566 359 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 DSCC1Q14AI0 399 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Kif1bpQ6ZPU9 617 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Ube3cQ80U95 1083 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Ppfibp1Q8C8U0 969 aaKnown RBP18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Prpf3Q922U1 683 aaKnown RBP18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Brms1Q99N20 246 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 MicalclQ9D5U9 680 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Tube1Q9D6T1 475 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Vstm4T1NXB5 319 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Akap11E9Q777 1895 aa18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Marf1Q8BJ34 1730 aaKnown RBP18.34■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Map7d2A2AG50 781 aa18.33■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Pde11aP0C1Q2 933 aa18.33■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Sox5P35710 763 aa18.33■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Pex1Q5BL07 1284 aa18.33■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 CerkQ8K4Q7 531 aa18.33■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Etnk1Q9D4V0 363 aa18.33■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Dennd3A2RT67 1274 aa18.33■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 NefhP19246 1090 aa18.33■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Irx2P81066 474 aa18.33■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Mcm6P97311 821 aa18.33■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Cyp4x1Q6A152 507 aa18.33■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Tas2r124Q7M718 309 aa18.33■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Lrrd1Q8C0R9 853 aa18.33■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Hexim1Q8R409 356 aaKnown RBP18.33■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Zbtb1Q91VL9 713 aa18.33■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Myh7bA2AQP0 1941 aa18.32■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 4932429P05RikA2ADI4 785 aa18.32■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Mdh1P14152 334 aa18.32■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Usp49Q6P9L4 685 aa18.32■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 TxlnaQ6PAM1 554 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 118.9 ms