RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Igsf3Q6ZQA6 1194 aa25.68■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Myl6bQ8CI43 207 aa25.68■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Znf830Q8R1N0 363 aaKnown RBP25.68■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Itgb1bp2Q9R000 350 aa25.68■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Ttc14Q9CSP9 761 aa25.68■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 PdclQ9DBX2 301 aa25.68■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Snrpa1P57784 255 aaKnown RBP25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Gas2l2Q5SSG4 860 aa25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Amotl2Q8K371 772 aa25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 AU022751B1B0V2 589 aa25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Lrrd1Q8C0R9 853 aa25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Tpcn1Q9EQJ0 817 aa25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 HnrnpcQ9Z204 313 aaKnown RBP25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Mx1P09922 631 aa25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Gpbp1Q6NXH3 473 aaKnown RBP25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Taf4E9QAP7 1042 aaKnown RBP25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Gbp5Q8CFB4 590 aa25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Eya2O08575 532 aa25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Rbm17Q8JZX4 405 aaKnown RBP25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Lzts2Q91YU6 671 aa25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 NapaQ9DB05 295 aa25.67■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 ErmnQ5EBJ4 281 aa25.66■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Dnajc25A2ALW5 357 aa25.66■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Cnot10Q8BH15 744 aa25.66■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 ClgnP52194 611 aa25.66■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 AdpgkQ8VDL4 496 aa25.66■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Thap12Q9CUX1 758 aa25.66■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Abcc6Q9R1S7 1498 aa25.66■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Lcmt1A0A0U1RNF2 332 aa25.65■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 A0A1W2P7S8 802 aa25.65■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Taf4bG5E8Z2 855 aa25.65■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Sult6b1P0CC03 303 aa25.65■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Esyt2Q3TZZ7 845 aa25.65■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Cdc5lQ6A068 802 aaKnown RBP25.65■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Tmem132eQ6IEE6 982 aa25.65■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Ccdc124Q9D8X2 217 aaKnown RBP25.65■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 RabggtaQ9JHK4 567 aa25.65■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Evi5P97366 809 aa25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Sgsm2Q80U12 1005 aa25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Kcnk13Q8R1P5 405 aa25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Cdk13Q69ZA1 1511 aaKnown RBP25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Myo1aO88329 1043 aa25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Lmnb2P21619 596 aaKnown RBP25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Gm5169Q5M8P2 212 aa25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Pfkfb1P70266 471 aa25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Gm5168Q4KL04 211 aa25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Actr5Q80US4 605 aaKnown RBP25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Slc26a7Q8R2Z3 656 aa25.64■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Lig3P97386 1015 aa25.64■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Cnnm4Q69ZF7 771 aa25.64■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Trim37Q6PCX9 961 aa25.64■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Serpinb12Q9D7P9 423 aa25.64■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Pde1bQ01065 535 aa25.64■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Q3TYL0 343 aa25.64■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Lmbrd2Q8C561 694 aa25.63■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Ppp2r3dQ9Z176 491 aa25.63■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Wdr44Q6NVE8 915 aa25.63■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Csrnp1P59054 583 aa25.63■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Cdc23Q8BGZ4 597 aa25.63■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Psmd6Q99JI4 389 aa25.63■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Gm6121L7MUF1 212 aa25.62■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Zfyve27Q3TXX3 415 aa25.62■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 TsksO54887 585 aa25.62■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Sde2Q8K1J5 448 aaKnown RBP25.62■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 HscbQ8K3A0 234 aa25.62■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Rfwd2Q9R1A8 733 aaKnown RBP25.62■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Erbb3Q61526 1339 aa25.62■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 SympkQ80X82 1284 aa25.61■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 MthfslL7N466 203 aa25.61■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Wdr24Q8CFJ9 790 aa25.61■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Stx12Q9ER00 274 aa25.61■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Pde11aP0C1Q2 933 aa25.61■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Parp1P11103 1013 aaKnown RBP25.61■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 C130026I21RikQ8C898 291 aa25.61■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Fam207aP58468 219 aaKnown RBP25.61■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Ankrd2Q9WV06 328 aa25.61■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Peg3Q3URU2 1571 aa25.61■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Zcchc8Q9CYA6 709 aaKnown RBP25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 RcvrnP34057 202 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Arl1P61211 181 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Trim60Q8VI40 466 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 LpxnQ99N69 386 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Irs4Q9Z0Y7 1216 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Cyp2ab1S4R196 498 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Prl7a2O54831 253 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Slc30a9Q5IRJ6 567 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 1700018F24RikB2RW27 314 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Terf1P70371 421 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Stk38lQ7TSE6 464 aa25.6■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Mybl2P48972 704 aa25.59■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 RragaQ80X95 313 aa25.59■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Apol10aQ8CCA5 318 aa25.59■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 CutaQ9CQ89 177 aa25.59■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 PcQ05920 1178 aa25.59■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Atp8b1Q148W0 1251 aa25.59■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Atp1a3Q6PIC6 1013 aa25.59■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Serpini1O35684 410 aa25.59■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Cabp7Q91ZM8 215 aa25.59■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 PhbP67778 272 aaKnown RBP25.59■■□□□ 1.69
Sh3rf1-201ENSMUST00000034060 Cfap74Q3UY96 1578 aa25.59■■□□□ 1.69
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms