RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Trav14-1A0A0G2JF94 121 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 P01790 122 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Fkbp2P45878 140 aaKnown RBP5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 4930432M17RikQ3V0W9 174 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Ube2d2bQ6ZWY6 147 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Prr30Q9D9B7 401 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Trav13d-3J3QMG8 112 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Pla2g2aP31482 146 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Mob4Q6PEB6 225 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 QrfpQ8CE23 124 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Defb6Q91VD6 63 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Frem1Q684R7 2191 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Bahcc1Q3UHR0 2643 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Ebi3O35228 228 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 BikO70337 150 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 P01793 123 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Mrpl53Q9D1H8 118 aaKnown RBP5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Gm10097J3KMK7 105 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 P18532 116 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Ndufb4Q9CQC7 129 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Ccl28Q9JIL2 130 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 Med12lQ8BQM9 2157 aa5.69□□□□□ -1.5
Chm-202ENSMUST00000113388 P01789 122 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Defb33Q30KN3 62 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 NppcQ61839 126 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Phlda3Q9WV95 125 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Heatr1G3X9B1 2143 aaKnown RBP5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 9830107B12RikD3Z5D6 160 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 P04943 107 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 P18529 117 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Olfr312Q7TRZ9 308 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Pcnx3Q8VI59 2028 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Gm6594J3QM43 95 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 P01791 123 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 P01808 119 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 ApohQ01339 345 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Faap20Q3UN58 186 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Fam53bQ8BGR5 422 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Il1f10Q8R459 152 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Fam216aQ9DB54 251 aa5.68□□□□□ -1.5
Chm-202ENSMUST00000113388 Ighv13-2A0A0A6YWN3 119 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 P01806 116 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Gm9733Q1AN91 178 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Serp1Q9Z1W5 66 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Cep192E9Q4Y4 2514 aaKnown RBP5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Iqcf6G3UWF2 157 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Zfp936Q3ULA8 456 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Gm12888Q3UW77 119 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Rpp25lQ99JH1 163 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Cd164Q9R0L9 197 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 FancmQ8BGE5 2021 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Ighv8-5A0A0A6YY60 119 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Rpl36-ps4A0A140T8U4 117 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Ndufa1O35683 70 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 PtprbB2RU80 1998 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Igkv6-13A0A0G2JGY3 119 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Saa4P31532 130 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Tcl1b1P56840 116 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Tcl1b2P56841 117 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Q0VG49 157 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Foxg1Q60987 481 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 TeppQ6IMH0 216 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Prok2Q9QXU7 128 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 TroQ6DIC6 2087 aa5.67□□□□□ -1.5
Chm-202ENSMUST00000113388 Rpl18aP62717 176 aaKnown RBP5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Ntn5Q3UQ22 452 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Cysrt1Q9D1E4 142 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Smg1Q8BKX6 3658 aaKnown RBP5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 4930518I15RikQ3V2W7 57 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Gm4792Q569Q2 183 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Foxb1Q64732 325 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Ighv1-18A0A0A6YXN4 117 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Snrpd3P62320 126 aaKnown RBP5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Pfn2Q9JJV2 140 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Mast4Q811L6 2618 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Ubr5Q80TP3 2792 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Trav14-2A0A075B694 121 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Ighv7-2A0A0A6YX91 119 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Gm21983D6RFS9 131 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 P01788 123 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 7420426K07RikQ3UX66 186 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 HampQ9EQ21 83 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Adgrg4B7ZCC9 3073 aa5.66□□□□□ -1.5
Chm-202ENSMUST00000113388 Gm8251F6VUT6 1994 aa5.65□□□□□ -1.5
Chm-202ENSMUST00000113388 Psmb11Q8BG41 302 aa5.65□□□□□ -1.5
Chm-202ENSMUST00000113388 MplkipQ9D011 178 aa5.65□□□□□ -1.5
Chm-202ENSMUST00000113388 PtprsB0V2N1 1907 aa5.65□□□□□ -1.5
Chm-202ENSMUST00000113388 Dennd4cA6H8H2 1906 aa5.65□□□□□ -1.5
Chm-202ENSMUST00000113388 Ros1Q78DX7 2340 aa5.65□□□□□ -1.5
Chm-202ENSMUST00000113388 1700084M14RikB1AT01 78 aa5.65□□□□□ -1.5
Chm-202ENSMUST00000113388 Nxph4G3X9N5 304 aa5.65□□□□□ -1.5
Chm-202ENSMUST00000113388 Mlst8Q9DCJ1 326 aa5.65□□□□□ -1.5
Chm-202ENSMUST00000113388 Tep1P97499 2629 aa5.65□□□□□ -1.51
Chm-202ENSMUST00000113388 Akap6E9Q9K8 2307 aa5.65□□□□□ -1.51
Chm-202ENSMUST00000113388 Tcl1b4P56844 120 aa5.65□□□□□ -1.51
Chm-202ENSMUST00000113388 Gm9945Q8BNZ3 91 aa5.65□□□□□ -1.51
Chm-202ENSMUST00000113388 Dph3Q8K0W9 82 aa5.65□□□□□ -1.51
Chm-202ENSMUST00000113388 Rnase4Q9JJH1 148 aa5.65□□□□□ -1.51
Chm-202ENSMUST00000113388 Gm19410A0A140LJC7 2098 aa5.65□□□□□ -1.51
Chm-202ENSMUST00000113388 Epg5Q80TA9 2572 aa5.65□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms