RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 KRTAP4-8A0A0G2JLE6 195 aa3.05□□□□□ -1.92
PHGDH-225ENST00000641720 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
PHGDH-225ENST00000641720 KRTAP4-8Q9BYQ9 185 aa3.05□□□□□ -1.92
PHGDH-225ENST00000641720 A0A0D9SG42 100 aa3.04□□□□□ -1.92
PHGDH-225ENST00000641720 PRR15LQ9BU68 103 aa3.03□□□□□ -1.92
PHGDH-225ENST00000641720 A8MU10 97 aa3.01□□□□□ -1.93
PHGDH-225ENST00000641720 PRO2289Q9P1D8 64 aa3.01□□□□□ -1.93
PHGDH-225ENST00000641720 KRTAP12-1P59990 96 aa3□□□□□ -1.93
PHGDH-225ENST00000641720 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
PHGDH-225ENST00000641720 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
PHGDH-225ENST00000641720 SPINT4Q6UDR6 99 aa2.97□□□□□ -1.93
PHGDH-225ENST00000641720 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
PHGDH-225ENST00000641720 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
PHGDH-225ENST00000641720 UQCR11O14957 56 aa2.94□□□□□ -1.94
PHGDH-225ENST00000641720 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
PHGDH-225ENST00000641720 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
PHGDH-225ENST00000641720 LCE1DQ5T752 114 aa2.9□□□□□ -1.95
PHGDH-225ENST00000641720 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
PHGDH-225ENST00000641720 C10orf95Q9H7T3 257 aa2.85□□□□□ -1.95
PHGDH-225ENST00000641720 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
PHGDH-225ENST00000641720 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
PHGDH-225ENST00000641720 TNP1P09430 55 aa2.76□□□□□ -1.97
PHGDH-225ENST00000641720 LCE4AQ5TA78 99 aa2.76□□□□□ -1.97
PHGDH-225ENST00000641720 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
PHGDH-225ENST00000641720 MT4P47944 62 aa2.75□□□□□ -1.97
PHGDH-225ENST00000641720 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
PHGDH-225ENST00000641720 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
PHGDH-225ENST00000641720 MT1EP04732 61 aa2.74□□□□□ -1.97
PHGDH-225ENST00000641720 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
PHGDH-225ENST00000641720 KRTAP9-4Q9BYQ2 154 aa2.73□□□□□ -1.97
PHGDH-225ENST00000641720 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
PHGDH-225ENST00000641720 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
PHGDH-225ENST00000641720 INE1O15225 51 aa2.67□□□□□ -1.98
PHGDH-225ENST00000641720 MT1GP13640 62 aa2.63□□□□□ -1.99
PHGDH-225ENST00000641720 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
PHGDH-225ENST00000641720 MT1MQ8N339 61 aa2.62□□□□□ -1.99
PHGDH-225ENST00000641720 MT1LQ93083 61 aa2.62□□□□□ -1.99
PHGDH-225ENST00000641720 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
PHGDH-225ENST00000641720 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
PHGDH-225ENST00000641720 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
PHGDH-225ENST00000641720 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
PHGDH-225ENST00000641720 MT3P25713 68 aa2.55□□□□□ -2
PHGDH-225ENST00000641720 PP632Q6XCG6 107 aa2.54□□□□□ -2
PHGDH-225ENST00000641720 KRTAP4-7Q9BYR0 210 aa2.53□□□□□ -2
PHGDH-225ENST00000641720 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
PHGDH-225ENST00000641720 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
PHGDH-225ENST00000641720 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
PHGDH-225ENST00000641720 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
PHGDH-225ENST00000641720 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
PHGDH-225ENST00000641720 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
PHGDH-225ENST00000641720 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
PHGDH-225ENST00000641720 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
PHGDH-225ENST00000641720 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
PHGDH-225ENST00000641720 LOC100996750A0A140TA64 210 aa2.38□□□□□ -2.03
PHGDH-225ENST00000641720 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
PHGDH-225ENST00000641720 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
PHGDH-225ENST00000641720 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
PHGDH-225ENST00000641720 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
PHGDH-225ENST00000641720 MT1AP04731 61 aa2.22□□□□□ -2.05
PHGDH-225ENST00000641720 KRTAP6-1Q3LI64 71 aa2.22□□□□□ -2.05
PHGDH-225ENST00000641720 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
PHGDH-225ENST00000641720 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
PHGDH-225ENST00000641720 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
PHGDH-225ENST00000641720 LCE1EQ5T753 118 aa2.08□□□□□ -2.08
PHGDH-225ENST00000641720 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
PHGDH-225ENST00000641720 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
PHGDH-225ENST00000641720 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
PHGDH-225ENST00000641720 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
PHGDH-225ENST00000641720 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
PHGDH-225ENST00000641720 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
PHGDH-225ENST00000641720 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
PHGDH-225ENST00000641720 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
PHGDH-225ENST00000641720 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
PHGDH-225ENST00000641720 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
PHGDH-225ENST00000641720 PRM1P04553 51 aa1.39□□□□□ -2.19
PHGDH-225ENST00000641720 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
PHGDH-225ENST00000641720 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
PHGDH-225ENST00000641720 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 114.1 ms