RNA–Protein interactions for RNA: ENST00000641713.1

CCDC196-210, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,464 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-210ENST00000641713 KRTAP19-8Q3LI54 63 aa3.06□□□□□ -1.92
CCDC196-210ENST00000641713 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
CCDC196-210ENST00000641713 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
CCDC196-210ENST00000641713 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
CCDC196-210ENST00000641713 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
CCDC196-210ENST00000641713 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.93
CCDC196-210ENST00000641713 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
CCDC196-210ENST00000641713 LCE1EQ5T753 118 aa2.96□□□□□ -1.93
CCDC196-210ENST00000641713 CRIPTQ9P021 101 aa2.96□□□□□ -1.93
CCDC196-210ENST00000641713 PRO2289Q9P1D8 64 aa2.96□□□□□ -1.93
CCDC196-210ENST00000641713 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
CCDC196-210ENST00000641713 NEBP20929 6669 aa2.94□□□□□ -1.94
CCDC196-210ENST00000641713 H0YAA0 97 aa2.9□□□□□ -1.94
CCDC196-210ENST00000641713 KMT2DO14686 5537 aa2.9□□□□□ -1.95
CCDC196-210ENST00000641713 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
CCDC196-210ENST00000641713 R4GN34 69 aa2.9□□□□□ -1.95
CCDC196-210ENST00000641713 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
CCDC196-210ENST00000641713 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
CCDC196-210ENST00000641713 SPRR2EP22531 72 aa2.88□□□□□ -1.95
CCDC196-210ENST00000641713 SPRR2BP35325 72 aa2.88□□□□□ -1.95
CCDC196-210ENST00000641713 SPRR2AP35326 72 aa2.88□□□□□ -1.95
CCDC196-210ENST00000641713 MT1XP80297 61 aa2.87□□□□□ -1.95
CCDC196-210ENST00000641713 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
CCDC196-210ENST00000641713 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
CCDC196-210ENST00000641713 KRTAP8-1Q8IUC2 63 aa2.84□□□□□ -1.95
CCDC196-210ENST00000641713 KRTAP12-2P59991 146 aa2.81□□□□□ -1.96
CCDC196-210ENST00000641713 M0QZ58 72 aa2.79□□□□□ -1.96
CCDC196-210ENST00000641713 KRTAP2-1Q9BYU5 128 aa2.79□□□□□ -1.96
CCDC196-210ENST00000641713 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
CCDC196-210ENST00000641713 SPRR2DP22532 72 aa2.77□□□□□ -1.97
CCDC196-210ENST00000641713 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
CCDC196-210ENST00000641713 INE1O15225 51 aa2.76□□□□□ -1.97
CCDC196-210ENST00000641713 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.97
CCDC196-210ENST00000641713 C10orf95Q9H7T3 257 aa2.7□□□□□ -1.98
CCDC196-210ENST00000641713 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
CCDC196-210ENST00000641713 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
CCDC196-210ENST00000641713 KRTAP13-4Q3LI77 160 aa2.57□□□□□ -2
CCDC196-210ENST00000641713 PP632Q6XCG6 107 aa2.57□□□□□ -2
CCDC196-210ENST00000641713 KRTAP19-7Q3SYF9 63 aa2.56□□□□□ -2
CCDC196-210ENST00000641713 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
CCDC196-210ENST00000641713 KRTAP19-3Q7Z4W3 81 aa2.55□□□□□ -2
CCDC196-210ENST00000641713 MT1EP04732 61 aa2.54□□□□□ -2
CCDC196-210ENST00000641713 A0A0D9SG42 100 aa2.52□□□□□ -2.01
CCDC196-210ENST00000641713 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
CCDC196-210ENST00000641713 MT1GP13640 62 aa2.47□□□□□ -2.01
CCDC196-210ENST00000641713 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
CCDC196-210ENST00000641713 MT4P47944 62 aa2.45□□□□□ -2.02
CCDC196-210ENST00000641713 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
CCDC196-210ENST00000641713 MT1MQ8N339 61 aa2.43□□□□□ -2.02
CCDC196-210ENST00000641713 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
CCDC196-210ENST00000641713 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
CCDC196-210ENST00000641713 MT1LQ93083 61 aa2.42□□□□□ -2.02
CCDC196-210ENST00000641713 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
CCDC196-210ENST00000641713 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
CCDC196-210ENST00000641713 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
CCDC196-210ENST00000641713 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
CCDC196-210ENST00000641713 TNP1P09430 55 aa2.34□□□□□ -2.03
CCDC196-210ENST00000641713 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
CCDC196-210ENST00000641713 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
CCDC196-210ENST00000641713 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
CCDC196-210ENST00000641713 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
CCDC196-210ENST00000641713 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
CCDC196-210ENST00000641713 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
CCDC196-210ENST00000641713 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
CCDC196-210ENST00000641713 MT1AP04731 61 aa2.05□□□□□ -2.08
CCDC196-210ENST00000641713 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
CCDC196-210ENST00000641713 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
CCDC196-210ENST00000641713 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
CCDC196-210ENST00000641713 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
CCDC196-210ENST00000641713 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
CCDC196-210ENST00000641713 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
CCDC196-210ENST00000641713 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
CCDC196-210ENST00000641713 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
CCDC196-210ENST00000641713 PRM1P04553 51 aa1.56□□□□□ -2.16
CCDC196-210ENST00000641713 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
CCDC196-210ENST00000641713 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
CCDC196-210ENST00000641713 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
CCDC196-210ENST00000641713 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 48.1 ms