RNA–Protein interactions for RNA: ENST00000641625.1

CASC19-246, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-246ENST00000641625 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
CASC19-246ENST00000641625 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
CASC19-246ENST00000641625 KRTAP12-2P59991 146 aa2.6□□□□□ -1.99
CASC19-246ENST00000641625 KRTAP13-4Q3LI77 160 aa2.6□□□□□ -1.99
CASC19-246ENST00000641625 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
CASC19-246ENST00000641625 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
CASC19-246ENST00000641625 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
CASC19-246ENST00000641625 MIR22HGQ0VDD5 57 aa2.57□□□□□ -2
CASC19-246ENST00000641625 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
CASC19-246ENST00000641625 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
CASC19-246ENST00000641625 A8MU10 97 aa2.57□□□□□ -2
CASC19-246ENST00000641625 KRTAP10-12P60413 245 aa2.55□□□□□ -2
CASC19-246ENST00000641625 A0A0D9SG42 100 aa2.54□□□□□ -2
CASC19-246ENST00000641625 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
CASC19-246ENST00000641625 Q1T7F1 81 aa2.52□□□□□ -2.01
CASC19-246ENST00000641625 A0A1B0GU69 56 aa2.51□□□□□ -2.01
CASC19-246ENST00000641625 SPRR2EP22531 72 aa2.51□□□□□ -2.01
CASC19-246ENST00000641625 SPRR2BP35325 72 aa2.51□□□□□ -2.01
CASC19-246ENST00000641625 SPRR2AP35326 72 aa2.51□□□□□ -2.01
CASC19-246ENST00000641625 ATP5EP56381 51 aaPredicted RBP2.51□□□□□ -2.01
CASC19-246ENST00000641625 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
CASC19-246ENST00000641625 KRTAP12-1P59990 96 aa2.48□□□□□ -2.01
CASC19-246ENST00000641625 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
CASC19-246ENST00000641625 PRR15LQ9BU68 103 aa2.45□□□□□ -2.02
CASC19-246ENST00000641625 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
CASC19-246ENST00000641625 SPRR2DP22532 72 aa2.43□□□□□ -2.02
CASC19-246ENST00000641625 LINC01558Q9Y6Z2 57 aa2.42□□□□□ -2.02
CASC19-246ENST00000641625 KRTAP19-7Q3SYF9 63 aa2.39□□□□□ -2.03
CASC19-246ENST00000641625 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
CASC19-246ENST00000641625 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
CASC19-246ENST00000641625 CDC42SE1Q9NRR8 79 aa2.39□□□□□ -2.03
CASC19-246ENST00000641625 MT1EP04732 61 aa2.38□□□□□ -2.03
CASC19-246ENST00000641625 UQCR11O14957 56 aa2.37□□□□□ -2.03
CASC19-246ENST00000641625 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
CASC19-246ENST00000641625 C10orf95Q9H7T3 257 aa2.36□□□□□ -2.03
CASC19-246ENST00000641625 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
CASC19-246ENST00000641625 TNP1P09430 55 aa2.35□□□□□ -2.03
CASC19-246ENST00000641625 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.04
CASC19-246ENST00000641625 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
CASC19-246ENST00000641625 DSTQ03001 7570 aaKnown RBP2.31□□□□□ -2.04
CASC19-246ENST00000641625 INE1O15225 51 aa2.3□□□□□ -2.04
CASC19-246ENST00000641625 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
CASC19-246ENST00000641625 MT1GP13640 62 aa2.28□□□□□ -2.04
CASC19-246ENST00000641625 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
CASC19-246ENST00000641625 MT1LQ93083 61 aa2.28□□□□□ -2.05
CASC19-246ENST00000641625 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
CASC19-246ENST00000641625 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
CASC19-246ENST00000641625 MT1MQ8N339 61 aa2.25□□□□□ -2.05
CASC19-246ENST00000641625 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
CASC19-246ENST00000641625 KRTAP4-3Q9BYR4 195 aa2.22□□□□□ -2.05
CASC19-246ENST00000641625 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
CASC19-246ENST00000641625 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
CASC19-246ENST00000641625 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
CASC19-246ENST00000641625 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
CASC19-246ENST00000641625 MT4P47944 62 aa2.13□□□□□ -2.07
CASC19-246ENST00000641625 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
CASC19-246ENST00000641625 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
CASC19-246ENST00000641625 KRTAP12-4P60329 112 aa2□□□□□ -2.09
CASC19-246ENST00000641625 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
CASC19-246ENST00000641625 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
CASC19-246ENST00000641625 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
CASC19-246ENST00000641625 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
CASC19-246ENST00000641625 MT1AP04731 61 aa1.93□□□□□ -2.1
CASC19-246ENST00000641625 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
CASC19-246ENST00000641625 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
CASC19-246ENST00000641625 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.12
CASC19-246ENST00000641625 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
CASC19-246ENST00000641625 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
CASC19-246ENST00000641625 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
CASC19-246ENST00000641625 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
CASC19-246ENST00000641625 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
CASC19-246ENST00000641625 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
CASC19-246ENST00000641625 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
CASC19-246ENST00000641625 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CASC19-246ENST00000641625 PRM1P04553 51 aa1.09□□□□□ -2.23
CASC19-246ENST00000641625 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
CASC19-246ENST00000641625 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 13.9 ms