RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PRO0628Q9UI54 55 aa3.91□□□□□ -1.78
PHGDH-222ENST00000641587 ROMO1P60602 79 aa3.9□□□□□ -1.79
PHGDH-222ENST00000641587 TNP1P09430 55 aa3.88□□□□□ -1.79
PHGDH-222ENST00000641587 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
PHGDH-222ENST00000641587 KRTAP25-1Q3LHN0 102 aa3.83□□□□□ -1.8
PHGDH-222ENST00000641587 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
PHGDH-222ENST00000641587 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
PHGDH-222ENST00000641587 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
PHGDH-222ENST00000641587 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
PHGDH-222ENST00000641587 MT1EP04732 61 aa3.74□□□□□ -1.81
PHGDH-222ENST00000641587 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
PHGDH-222ENST00000641587 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
PHGDH-222ENST00000641587 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
PHGDH-222ENST00000641587 MT4P47944 62 aa3.72□□□□□ -1.81
PHGDH-222ENST00000641587 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
PHGDH-222ENST00000641587 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
PHGDH-222ENST00000641587 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
PHGDH-222ENST00000641587 LCE4AQ5TA78 99 aa3.65□□□□□ -1.83
PHGDH-222ENST00000641587 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
PHGDH-222ENST00000641587 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
PHGDH-222ENST00000641587 KRTAP19-5Q3LI72 72 aa3.62□□□□□ -1.83
PHGDH-222ENST00000641587 MT1GP13640 62 aa3.6□□□□□ -1.83
PHGDH-222ENST00000641587 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
PHGDH-222ENST00000641587 MT1MQ8N339 61 aa3.58□□□□□ -1.84
PHGDH-222ENST00000641587 KRTAP4-6Q9BYQ5 205 aa3.58□□□□□ -1.84
PHGDH-222ENST00000641587 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
PHGDH-222ENST00000641587 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
PHGDH-222ENST00000641587 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
PHGDH-222ENST00000641587 SVIPQ8NHG7 77 aa3.52□□□□□ -1.85
PHGDH-222ENST00000641587 MT1LQ93083 61 aa3.52□□□□□ -1.85
PHGDH-222ENST00000641587 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
PHGDH-222ENST00000641587 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
PHGDH-222ENST00000641587 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
PHGDH-222ENST00000641587 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
PHGDH-222ENST00000641587 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
PHGDH-222ENST00000641587 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
PHGDH-222ENST00000641587 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
PHGDH-222ENST00000641587 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
PHGDH-222ENST00000641587 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
PHGDH-222ENST00000641587 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
PHGDH-222ENST00000641587 LOC100996750A0A140TA64 210 aa3.23□□□□□ -1.89
PHGDH-222ENST00000641587 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.91
PHGDH-222ENST00000641587 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
PHGDH-222ENST00000641587 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
PHGDH-222ENST00000641587 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
PHGDH-222ENST00000641587 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
PHGDH-222ENST00000641587 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
PHGDH-222ENST00000641587 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
PHGDH-222ENST00000641587 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
PHGDH-222ENST00000641587 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
PHGDH-222ENST00000641587 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
PHGDH-222ENST00000641587 MT1AP04731 61 aa2.98□□□□□ -1.93
PHGDH-222ENST00000641587 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
PHGDH-222ENST00000641587 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
PHGDH-222ENST00000641587 KRTAP9-4Q9BYQ2 154 aa2.9□□□□□ -1.95
PHGDH-222ENST00000641587 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
PHGDH-222ENST00000641587 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
PHGDH-222ENST00000641587 MT3P25713 68 aa2.71□□□□□ -1.98
PHGDH-222ENST00000641587 LCE1EQ5T753 118 aa2.53□□□□□ -2
PHGDH-222ENST00000641587 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
PHGDH-222ENST00000641587 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
PHGDH-222ENST00000641587 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
PHGDH-222ENST00000641587 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
PHGDH-222ENST00000641587 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
PHGDH-222ENST00000641587 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
PHGDH-222ENST00000641587 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
PHGDH-222ENST00000641587 INE1O15225 51 aa2.31□□□□□ -2.04
PHGDH-222ENST00000641587 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
PHGDH-222ENST00000641587 H3BS24 57 aa2.19□□□□□ -2.06
PHGDH-222ENST00000641587 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
PHGDH-222ENST00000641587 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
PHGDH-222ENST00000641587 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
PHGDH-222ENST00000641587 PRM1P04553 51 aa2.03□□□□□ -2.08
PHGDH-222ENST00000641587 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
PHGDH-222ENST00000641587 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
PHGDH-222ENST00000641587 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
PHGDH-222ENST00000641587 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
PHGDH-222ENST00000641587 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 65.7 ms