RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
PHGDH-221ENST00000641573 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
PHGDH-221ENST00000641573 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
PHGDH-221ENST00000641573 GPR98Q8WXG9 6306 aa5.14□□□□□ -1.59
PHGDH-221ENST00000641573 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
PHGDH-221ENST00000641573 SPRR2DP22532 72 aa5.1□□□□□ -1.59
PHGDH-221ENST00000641573 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
PHGDH-221ENST00000641573 KRTAP8-1Q8IUC2 63 aa5.03□□□□□ -1.6
PHGDH-221ENST00000641573 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
PHGDH-221ENST00000641573 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
PHGDH-221ENST00000641573 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
PHGDH-221ENST00000641573 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
PHGDH-221ENST00000641573 KRTAP19-5Q3LI72 72 aa4.91□□□□□ -1.62
PHGDH-221ENST00000641573 H3BS24 57 aa4.89□□□□□ -1.63
PHGDH-221ENST00000641573 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
PHGDH-221ENST00000641573 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
PHGDH-221ENST00000641573 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
PHGDH-221ENST00000641573 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
PHGDH-221ENST00000641573 MT1EP04732 61 aa4.76□□□□□ -1.65
PHGDH-221ENST00000641573 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
PHGDH-221ENST00000641573 MT1LQ93083 61 aa4.66□□□□□ -1.66
PHGDH-221ENST00000641573 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
PHGDH-221ENST00000641573 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
PHGDH-221ENST00000641573 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
PHGDH-221ENST00000641573 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
PHGDH-221ENST00000641573 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
PHGDH-221ENST00000641573 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
PHGDH-221ENST00000641573 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
PHGDH-221ENST00000641573 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
PHGDH-221ENST00000641573 MT1GP13640 62 aa4.53□□□□□ -1.68
PHGDH-221ENST00000641573 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
PHGDH-221ENST00000641573 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
PHGDH-221ENST00000641573 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
PHGDH-221ENST00000641573 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
PHGDH-221ENST00000641573 MT4P47944 62 aa4.49□□□□□ -1.69
PHGDH-221ENST00000641573 MT1MQ8N339 61 aa4.49□□□□□ -1.69
PHGDH-221ENST00000641573 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
PHGDH-221ENST00000641573 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
PHGDH-221ENST00000641573 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
PHGDH-221ENST00000641573 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
PHGDH-221ENST00000641573 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
PHGDH-221ENST00000641573 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
PHGDH-221ENST00000641573 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
PHGDH-221ENST00000641573 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
PHGDH-221ENST00000641573 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
PHGDH-221ENST00000641573 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
PHGDH-221ENST00000641573 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
PHGDH-221ENST00000641573 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
PHGDH-221ENST00000641573 MT1AP04731 61 aa3.96□□□□□ -1.78
PHGDH-221ENST00000641573 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
PHGDH-221ENST00000641573 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
PHGDH-221ENST00000641573 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
PHGDH-221ENST00000641573 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
PHGDH-221ENST00000641573 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
PHGDH-221ENST00000641573 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
PHGDH-221ENST00000641573 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
PHGDH-221ENST00000641573 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
PHGDH-221ENST00000641573 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
PHGDH-221ENST00000641573 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
PHGDH-221ENST00000641573 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
PHGDH-221ENST00000641573 MT3P25713 68 aa3.59□□□□□ -1.83
PHGDH-221ENST00000641573 INE1O15225 51 aa3.5□□□□□ -1.85
PHGDH-221ENST00000641573 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
PHGDH-221ENST00000641573 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
PHGDH-221ENST00000641573 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
PHGDH-221ENST00000641573 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
PHGDH-221ENST00000641573 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
PHGDH-221ENST00000641573 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
PHGDH-221ENST00000641573 PRM1P04553 51 aa2.9□□□□□ -1.95
PHGDH-221ENST00000641573 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
PHGDH-221ENST00000641573 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
PHGDH-221ENST00000641573 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
PHGDH-221ENST00000641573 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
PHGDH-221ENST00000641573 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
PHGDH-221ENST00000641573 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
PHGDH-221ENST00000641573 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
PHGDH-221ENST00000641573 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
PHGDH-221ENST00000641573 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 56.9 ms