RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
PHGDH-218ENST00000641491 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
PHGDH-218ENST00000641491 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
PHGDH-218ENST00000641491 LCE1AQ5T7P2 110 aa4.9□□□□□ -1.63
PHGDH-218ENST00000641491 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
PHGDH-218ENST00000641491 SPRR2DP22532 72 aa4.85□□□□□ -1.63
PHGDH-218ENST00000641491 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
PHGDH-218ENST00000641491 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
PHGDH-218ENST00000641491 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
PHGDH-218ENST00000641491 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
PHGDH-218ENST00000641491 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
PHGDH-218ENST00000641491 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
PHGDH-218ENST00000641491 MT1EP04732 61 aa4.75□□□□□ -1.65
PHGDH-218ENST00000641491 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
PHGDH-218ENST00000641491 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
PHGDH-218ENST00000641491 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
PHGDH-218ENST00000641491 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
PHGDH-218ENST00000641491 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
PHGDH-218ENST00000641491 MT1LQ93083 61 aa4.61□□□□□ -1.67
PHGDH-218ENST00000641491 MT1GP13640 62 aa4.6□□□□□ -1.67
PHGDH-218ENST00000641491 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
PHGDH-218ENST00000641491 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
PHGDH-218ENST00000641491 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
PHGDH-218ENST00000641491 MT1MQ8N339 61 aa4.5□□□□□ -1.69
PHGDH-218ENST00000641491 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
PHGDH-218ENST00000641491 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
PHGDH-218ENST00000641491 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
PHGDH-218ENST00000641491 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
PHGDH-218ENST00000641491 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
PHGDH-218ENST00000641491 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
PHGDH-218ENST00000641491 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
PHGDH-218ENST00000641491 MT4P47944 62 aa4.28□□□□□ -1.72
PHGDH-218ENST00000641491 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
PHGDH-218ENST00000641491 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
PHGDH-218ENST00000641491 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
PHGDH-218ENST00000641491 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
PHGDH-218ENST00000641491 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
PHGDH-218ENST00000641491 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
PHGDH-218ENST00000641491 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
PHGDH-218ENST00000641491 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
PHGDH-218ENST00000641491 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
PHGDH-218ENST00000641491 MT1AP04731 61 aa3.95□□□□□ -1.78
PHGDH-218ENST00000641491 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
PHGDH-218ENST00000641491 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
PHGDH-218ENST00000641491 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
PHGDH-218ENST00000641491 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
PHGDH-218ENST00000641491 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
PHGDH-218ENST00000641491 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
PHGDH-218ENST00000641491 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
PHGDH-218ENST00000641491 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
PHGDH-218ENST00000641491 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
PHGDH-218ENST00000641491 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
PHGDH-218ENST00000641491 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
PHGDH-218ENST00000641491 MT3P25713 68 aa3.65□□□□□ -1.83
PHGDH-218ENST00000641491 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
PHGDH-218ENST00000641491 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
PHGDH-218ENST00000641491 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
PHGDH-218ENST00000641491 H3BS24 57 aa3.57□□□□□ -1.84
PHGDH-218ENST00000641491 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
PHGDH-218ENST00000641491 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
PHGDH-218ENST00000641491 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
PHGDH-218ENST00000641491 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
PHGDH-218ENST00000641491 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
PHGDH-218ENST00000641491 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
PHGDH-218ENST00000641491 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
PHGDH-218ENST00000641491 INE1O15225 51 aa3.05□□□□□ -1.92
PHGDH-218ENST00000641491 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
PHGDH-218ENST00000641491 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
PHGDH-218ENST00000641491 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
PHGDH-218ENST00000641491 PRM1P04553 51 aa2.65□□□□□ -1.99
PHGDH-218ENST00000641491 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
PHGDH-218ENST00000641491 LCE1FQ5T754 118 aa2.57□□□□□ -2
PHGDH-218ENST00000641491 PHGR1C9JFL3 82 aa2.56□□□□□ -2
PHGDH-218ENST00000641491 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
PHGDH-218ENST00000641491 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
PHGDH-218ENST00000641491 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
PHGDH-218ENST00000641491 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
PHGDH-218ENST00000641491 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 28.4 ms