RNA–Protein interactions for RNA: ENST00000639876.1

TRIO-225, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene TRIO, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-225ENST00000639876 PSPHP1O15172 72 aa3.79□□□□□ -1.8
TRIO-225ENST00000639876 SPRR2DP22532 72 aa3.79□□□□□ -1.8
TRIO-225ENST00000639876 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
TRIO-225ENST00000639876 A0A1B0GU33 70 aa3.72□□□□□ -1.81
TRIO-225ENST00000639876 A6NED7 52 aa3.72□□□□□ -1.81
TRIO-225ENST00000639876 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
TRIO-225ENST00000639876 UQCR11O14957 56 aa3.71□□□□□ -1.82
TRIO-225ENST00000639876 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
TRIO-225ENST00000639876 MT3P25713 68 aa3.7□□□□□ -1.82
TRIO-225ENST00000639876 MIR22HGQ0VDD5 57 aa3.65□□□□□ -1.83
TRIO-225ENST00000639876 SPATA8Q6RVD6 105 aa3.65□□□□□ -1.83
TRIO-225ENST00000639876 A0A0D9SG42 100 aa3.61□□□□□ -1.83
TRIO-225ENST00000639876 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
TRIO-225ENST00000639876 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
TRIO-225ENST00000639876 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
TRIO-225ENST00000639876 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
TRIO-225ENST00000639876 A8MU10 97 aa3.58□□□□□ -1.84
TRIO-225ENST00000639876 K7ERS5 55 aa3.57□□□□□ -1.84
TRIO-225ENST00000639876 SPINT4Q6UDR6 99 aa3.55□□□□□ -1.84
TRIO-225ENST00000639876 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
TRIO-225ENST00000639876 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
TRIO-225ENST00000639876 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
TRIO-225ENST00000639876 MT1EP04732 61 aa3.5□□□□□ -1.85
TRIO-225ENST00000639876 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
TRIO-225ENST00000639876 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
TRIO-225ENST00000639876 MT1GP13640 62 aa3.47□□□□□ -1.85
TRIO-225ENST00000639876 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
TRIO-225ENST00000639876 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
TRIO-225ENST00000639876 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
TRIO-225ENST00000639876 TNP1P09430 55 aa3.42□□□□□ -1.86
TRIO-225ENST00000639876 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
TRIO-225ENST00000639876 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
TRIO-225ENST00000639876 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
TRIO-225ENST00000639876 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
TRIO-225ENST00000639876 ROMO1P60602 79 aa3.35□□□□□ -1.87
TRIO-225ENST00000639876 MT1MQ8N339 61 aa3.33□□□□□ -1.88
TRIO-225ENST00000639876 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
TRIO-225ENST00000639876 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
TRIO-225ENST00000639876 MT1LQ93083 61 aa3.32□□□□□ -1.88
TRIO-225ENST00000639876 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
TRIO-225ENST00000639876 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
TRIO-225ENST00000639876 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
TRIO-225ENST00000639876 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
TRIO-225ENST00000639876 MT4P47944 62 aa3.25□□□□□ -1.89
TRIO-225ENST00000639876 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
TRIO-225ENST00000639876 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
TRIO-225ENST00000639876 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
TRIO-225ENST00000639876 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
TRIO-225ENST00000639876 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
TRIO-225ENST00000639876 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
TRIO-225ENST00000639876 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
TRIO-225ENST00000639876 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
TRIO-225ENST00000639876 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
TRIO-225ENST00000639876 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
TRIO-225ENST00000639876 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
TRIO-225ENST00000639876 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
TRIO-225ENST00000639876 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
TRIO-225ENST00000639876 MT1AP04731 61 aa2.87□□□□□ -1.95
TRIO-225ENST00000639876 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
TRIO-225ENST00000639876 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
TRIO-225ENST00000639876 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
TRIO-225ENST00000639876 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
TRIO-225ENST00000639876 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
TRIO-225ENST00000639876 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
TRIO-225ENST00000639876 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
TRIO-225ENST00000639876 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
TRIO-225ENST00000639876 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
TRIO-225ENST00000639876 LCE1CQ5T751 118 aa2.54□□□□□ -2
TRIO-225ENST00000639876 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
TRIO-225ENST00000639876 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
TRIO-225ENST00000639876 INE1O15225 51 aa2.13□□□□□ -2.07
TRIO-225ENST00000639876 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
TRIO-225ENST00000639876 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
TRIO-225ENST00000639876 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
TRIO-225ENST00000639876 PRM1P04553 51 aa1.74□□□□□ -2.13
TRIO-225ENST00000639876 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
TRIO-225ENST00000639876 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 50.2 ms