RNA–Protein interactions for RNA: ENST00000637535.1

CACNB4-256, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,731 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-256	ENST00000637535	SPRR5	A0A1B0GTR4	108 aa		3.29	□□□□□ -1.88
CACNB4-256	ENST00000637535	MT2A	P02795	61 aa		3.28	□□□□□ -1.88
CACNB4-256	ENST00000637535	MT1F	P04733	61 aa		3.27	□□□□□ -1.89
CACNB4-256	ENST00000637535	KRTAP5-11	Q6L8G4	156 aa		3.27	□□□□□ -1.89
CACNB4-256	ENST00000637535	KRTAP10-10	P60014	251 aa		3.23	□□□□□ -1.89
CACNB4-256	ENST00000637535		R4GN34	69 aa		3.23	□□□□□ -1.89
CACNB4-256	ENST00000637535	KRTAP5-1	Q6L8H4	278 aa		3.22	□□□□□ -1.89
CACNB4-256	ENST00000637535	KRTAP4-4	Q9BYR3	166 aa		3.19	□□□□□ -1.9
CACNB4-256	ENST00000637535	KRTAP19-6	Q3LI70	58 aa		3.16	□□□□□ -1.9
CACNB4-256	ENST00000637535	KRTAP2-2	Q9BYT5	123 aa		3.15	□□□□□ -1.91
CACNB4-256	ENST00000637535	MUC12	Q9UKN1	5478 aa		3.13	□□□□□ -1.91
CACNB4-256	ENST00000637535	KRTAP6-3	Q3LI67	103 aa		3.12	□□□□□ -1.91
CACNB4-256	ENST00000637535	NEB	P20929	6669 aa		3.07	□□□□□ -1.92
CACNB4-256	ENST00000637535	KRTAP10-7	P60409	375 aa	Predicted RBP	3.04	□□□□□ -1.92
CACNB4-256	ENST00000637535	MT3	P25713	68 aa		3.02	□□□□□ -1.93
CACNB4-256	ENST00000637535	KRTAP20-1	Q3LI63	56 aa		3.01	□□□□□ -1.93
CACNB4-256	ENST00000637535	TNP1	P09430	55 aa		2.96	□□□□□ -1.93
CACNB4-256	ENST00000637535	KRTAP5-2	Q701N4	177 aa		2.96	□□□□□ -1.93
CACNB4-256	ENST00000637535	KMT2D	O14686	5537 aa		2.96	□□□□□ -1.94
CACNB4-256	ENST00000637535	MDN1	Q9NU22	5596 aa		2.95	□□□□□ -1.94
CACNB4-256	ENST00000637535	MT1B	P07438	61 aa		2.93	□□□□□ -1.94
CACNB4-256	ENST00000637535	KRTAP10-5	P60370	271 aa		2.87	□□□□□ -1.95
CACNB4-256	ENST00000637535	KRTAP2-3	P0C7H8	128 aa		2.85	□□□□□ -1.95
CACNB4-256	ENST00000637535	LCE1E	Q5T753	118 aa		2.85	□□□□□ -1.95
CACNB4-256	ENST00000637535	KRTAP2-4	Q9BYR9	128 aa		2.85	□□□□□ -1.95
CACNB4-256	ENST00000637535	KRTAP19-8	Q3LI54	63 aa		2.84	□□□□□ -1.96
CACNB4-256	ENST00000637535	SPRR2F	Q96RM1	72 aa		2.82	□□□□□ -1.96
CACNB4-256	ENST00000637535	SPRR2G	Q9BYE4	73 aa		2.82	□□□□□ -1.96
CACNB4-256	ENST00000637535	SPRR2E	P22531	72 aa		2.82	□□□□□ -1.96
CACNB4-256	ENST00000637535	SPRR2B	P35325	72 aa		2.82	□□□□□ -1.96
CACNB4-256	ENST00000637535	SPRR2A	P35326	72 aa		2.82	□□□□□ -1.96
CACNB4-256	ENST00000637535	KRTAP2-1	Q9BYU5	128 aa		2.76	□□□□□ -1.97
CACNB4-256	ENST00000637535	LCE1F	Q5T754	118 aa		2.75	□□□□□ -1.97
CACNB4-256	ENST00000637535	SPRR2D	P22532	72 aa		2.72	□□□□□ -1.97
CACNB4-256	ENST00000637535	KRTAP8-1	Q8IUC2	63 aa		2.72	□□□□□ -1.97
CACNB4-256	ENST00000637535	MT1X	P80297	61 aa		2.7	□□□□□ -1.98
CACNB4-256	ENST00000637535	LCE3A	Q5TA76	89 aa		2.7	□□□□□ -1.98
CACNB4-256	ENST00000637535	KRTAP10-12	P60413	245 aa		2.69	□□□□□ -1.98
CACNB4-256	ENST00000637535	KRTAP5-8	O75690	187 aa		2.66	□□□□□ -1.98
CACNB4-256	ENST00000637535	KRTAP4-3	Q9BYR4	195 aa		2.66	□□□□□ -1.98
CACNB4-256	ENST00000637535	DST	Q03001	7570 aa	Known RBP	2.65	□□□□□ -1.98
CACNB4-256	ENST00000637535	HMCN1	Q96RW7	5635 aa		2.59	□□□□□ -2
CACNB4-256	ENST00000637535	KRTAP12-3	P60328	96 aa		2.58	□□□□□ -2
CACNB4-256	ENST00000637535	LCE3C	Q5T5A8	94 aa		2.58	□□□□□ -2
CACNB4-256	ENST00000637535	GPR98	Q8WXG9	6306 aa		2.58	□□□□□ -2
CACNB4-256	ENST00000637535	KRTAP9-6	A8MVA2	160 aa		2.56	□□□□□ -2
CACNB4-256	ENST00000637535	OBSCN	Q5VST9	7968 aa		2.55	□□□□□ -2
CACNB4-256	ENST00000637535	MT4	P47944	62 aa		2.45	□□□□□ -2.02
CACNB4-256	ENST00000637535	KRTAP19-7	Q3SYF9	63 aa		2.41	□□□□□ -2.02
CACNB4-256	ENST00000637535	KRTAP19-3	Q7Z4W3	81 aa		2.4	□□□□□ -2.02
CACNB4-256	ENST00000637535	MT1E	P04732	61 aa		2.39	□□□□□ -2.03
CACNB4-256	ENST00000637535	AHNAK2	Q8IVF2	5795 aa		2.37	□□□□□ -2.03
CACNB4-256	ENST00000637535	LCE3E	Q5T5B0	92 aa		2.36	□□□□□ -2.03
CACNB4-256	ENST00000637535	KRTAP5-10	Q6L8G5	202 aa		2.36	□□□□□ -2.03
CACNB4-256	ENST00000637535	KRTAP19-5	Q3LI72	72 aa		2.34	□□□□□ -2.04
CACNB4-256	ENST00000637535	MT1G	P13640	62 aa		2.31	□□□□□ -2.04
CACNB4-256	ENST00000637535	MT1M	Q8N339	61 aa		2.3	□□□□□ -2.04
CACNB4-256	ENST00000637535	KRTAP12-4	P60329	112 aa		2.28	□□□□□ -2.05
CACNB4-256	ENST00000637535	KRTAP5-7	Q6L8G8	165 aa		2.26	□□□□□ -2.05
CACNB4-256	ENST00000637535	MT1L	Q93083	61 aa		2.25	□□□□□ -2.05
CACNB4-256	ENST00000637535	SYNE1	Q8NF91	8797 aa	Known RBP	2.2	□□□□□ -2.06
CACNB4-256	ENST00000637535	KRTAP20-2	Q3LI61	65 aa		2.19	□□□□□ -2.06
CACNB4-256	ENST00000637535	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.11	□□□□□ -2.07
CACNB4-256	ENST00000637535	PRM1	P04553	51 aa		2.07	□□□□□ -2.08
CACNB4-256	ENST00000637535	MT1A	P04731	61 aa		2.06	□□□□□ -2.08
CACNB4-256	ENST00000637535	LCE3D	Q9BYE3	92 aa		2.02	□□□□□ -2.09
CACNB4-256	ENST00000637535	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.99	□□□□□ -2.09
CACNB4-256	ENST00000637535	MUC5AC	P98088	5654 aa		1.98	□□□□□ -2.09
CACNB4-256	ENST00000637535	AHNAK	Q09666	5890 aa	Known RBP	1.97	□□□□□ -2.09
CACNB4-256	ENST00000637535	KRTAP6-1	Q3LI64	71 aa		1.95	□□□□□ -2.1
CACNB4-256	ENST00000637535	KRTAP6-2	Q3LI66	62 aa		1.9	□□□□□ -2.11
CACNB4-256	ENST00000637535	LCE1C	Q5T751	118 aa		1.88	□□□□□ -2.11
CACNB4-256	ENST00000637535	LCE1B	Q5T7P3	118 aa		1.88	□□□□□ -2.11
CACNB4-256	ENST00000637535	MUC19	Q7Z5P9	8384 aa		1.6	□□□□□ -2.15
CACNB4-256	ENST00000637535	KRTAP21-1	Q3LI58	79 aa		1.43	□□□□□ -2.18
CACNB4-256	ENST00000637535	PHGR1	C9JFL3	82 aa		1.4	□□□□□ -2.18
CACNB4-256	ENST00000637535	KRTAP21-2	Q3LI59	83 aa		1.35	□□□□□ -2.19
CACNB4-256	ENST00000637535	MUC16	Q8WXI7	14507 aa		0.82	□□□□□ -2.28

Retrieved 78 of 20,778 RNA–protein pairs in 71.7 ms