RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.59
LINC00643-207ENST00000637212 KRTAP20-1Q3LI63 56 aa5.12□□□□□ -1.59
LINC00643-207ENST00000637212 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
LINC00643-207ENST00000637212 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
LINC00643-207ENST00000637212 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
LINC00643-207ENST00000637212 KRTAP5-9P26371 169 aa5.09□□□□□ -1.59
LINC00643-207ENST00000637212 KMT2DO14686 5537 aa5.08□□□□□ -1.6
LINC00643-207ENST00000637212 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
LINC00643-207ENST00000637212 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
LINC00643-207ENST00000637212 MDN1Q9NU22 5596 aa5.01□□□□□ -1.61
LINC00643-207ENST00000637212 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
LINC00643-207ENST00000637212 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
LINC00643-207ENST00000637212 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
LINC00643-207ENST00000637212 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
LINC00643-207ENST00000637212 SPRR2FQ96RM1 72 aa4.93□□□□□ -1.62
LINC00643-207ENST00000637212 KRTAP2-3P0C7H8 128 aa4.92□□□□□ -1.62
LINC00643-207ENST00000637212 KRTAP2-4Q9BYR9 128 aa4.92□□□□□ -1.62
LINC00643-207ENST00000637212 MT1EP04732 61 aa4.91□□□□□ -1.62
LINC00643-207ENST00000637212 SPRR2EP22531 72 aa4.87□□□□□ -1.63
LINC00643-207ENST00000637212 SPRR2BP35325 72 aa4.87□□□□□ -1.63
LINC00643-207ENST00000637212 SPRR2AP35326 72 aa4.87□□□□□ -1.63
LINC00643-207ENST00000637212 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
LINC00643-207ENST00000637212 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
LINC00643-207ENST00000637212 MT1LQ93083 61 aa4.78□□□□□ -1.64
LINC00643-207ENST00000637212 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
LINC00643-207ENST00000637212 MT1GP13640 62 aa4.75□□□□□ -1.65
LINC00643-207ENST00000637212 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
LINC00643-207ENST00000637212 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
LINC00643-207ENST00000637212 SPRR2DP22532 72 aa4.72□□□□□ -1.65
LINC00643-207ENST00000637212 SVIPQ8NHG7 77 aa4.72□□□□□ -1.65
LINC00643-207ENST00000637212 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
LINC00643-207ENST00000637212 MT1MQ8N339 61 aa4.63□□□□□ -1.67
LINC00643-207ENST00000637212 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
LINC00643-207ENST00000637212 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
LINC00643-207ENST00000637212 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
LINC00643-207ENST00000637212 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.7
LINC00643-207ENST00000637212 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
LINC00643-207ENST00000637212 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
LINC00643-207ENST00000637212 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
LINC00643-207ENST00000637212 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
LINC00643-207ENST00000637212 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
LINC00643-207ENST00000637212 MT4P47944 62 aa4.13□□□□□ -1.75
LINC00643-207ENST00000637212 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
LINC00643-207ENST00000637212 MT1AP04731 61 aa4.08□□□□□ -1.76
LINC00643-207ENST00000637212 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
LINC00643-207ENST00000637212 KRTAP12-4P60329 112 aa4□□□□□ -1.77
LINC00643-207ENST00000637212 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
LINC00643-207ENST00000637212 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
LINC00643-207ENST00000637212 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
LINC00643-207ENST00000637212 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
LINC00643-207ENST00000637212 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
LINC00643-207ENST00000637212 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
LINC00643-207ENST00000637212 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
LINC00643-207ENST00000637212 MT3P25713 68 aa3.74□□□□□ -1.81
LINC00643-207ENST00000637212 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
LINC00643-207ENST00000637212 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
LINC00643-207ENST00000637212 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
LINC00643-207ENST00000637212 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
LINC00643-207ENST00000637212 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
LINC00643-207ENST00000637212 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
LINC00643-207ENST00000637212 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
LINC00643-207ENST00000637212 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
LINC00643-207ENST00000637212 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
LINC00643-207ENST00000637212 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
LINC00643-207ENST00000637212 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
LINC00643-207ENST00000637212 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
LINC00643-207ENST00000637212 INE1O15225 51 aa3.25□□□□□ -1.89
LINC00643-207ENST00000637212 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
LINC00643-207ENST00000637212 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
LINC00643-207ENST00000637212 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
LINC00643-207ENST00000637212 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
LINC00643-207ENST00000637212 PRM1P04553 51 aa2.76□□□□□ -1.97
LINC00643-207ENST00000637212 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
LINC00643-207ENST00000637212 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
LINC00643-207ENST00000637212 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
LINC00643-207ENST00000637212 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
LINC00643-207ENST00000637212 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 44.3 ms