RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
CTSD-208ENST00000636843 TNP1P09430 55 aa5.08□□□□□ -1.6
CTSD-208ENST00000636843 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
CTSD-208ENST00000636843 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
CTSD-208ENST00000636843 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
CTSD-208ENST00000636843 LCE3BQ5TA77 95 aa5□□□□□ -1.61
CTSD-208ENST00000636843 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
CTSD-208ENST00000636843 LCE3AQ5TA76 89 aa4.79□□□□□ -1.64
CTSD-208ENST00000636843 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
CTSD-208ENST00000636843 GPR98Q8WXG9 6306 aa4.76□□□□□ -1.65
CTSD-208ENST00000636843 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
CTSD-208ENST00000636843 KRTAP19-7Q3SYF9 63 aa4.71□□□□□ -1.66
CTSD-208ENST00000636843 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
CTSD-208ENST00000636843 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
CTSD-208ENST00000636843 MT1EP04732 61 aa4.68□□□□□ -1.66
CTSD-208ENST00000636843 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
CTSD-208ENST00000636843 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
CTSD-208ENST00000636843 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
CTSD-208ENST00000636843 MT1GP13640 62 aa4.57□□□□□ -1.68
CTSD-208ENST00000636843 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
CTSD-208ENST00000636843 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
CTSD-208ENST00000636843 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
CTSD-208ENST00000636843 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
CTSD-208ENST00000636843 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
CTSD-208ENST00000636843 MT4P47944 62 aa4.49□□□□□ -1.69
CTSD-208ENST00000636843 MT1MQ8N339 61 aa4.47□□□□□ -1.69
CTSD-208ENST00000636843 AHNAK2Q8IVF2 5795 aa4.45□□□□□ -1.7
CTSD-208ENST00000636843 MT1LQ93083 61 aa4.44□□□□□ -1.7
CTSD-208ENST00000636843 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
CTSD-208ENST00000636843 H3BS24 57 aa4.39□□□□□ -1.71
CTSD-208ENST00000636843 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
CTSD-208ENST00000636843 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
CTSD-208ENST00000636843 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
CTSD-208ENST00000636843 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
CTSD-208ENST00000636843 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
CTSD-208ENST00000636843 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
CTSD-208ENST00000636843 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.73
CTSD-208ENST00000636843 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
CTSD-208ENST00000636843 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
CTSD-208ENST00000636843 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
CTSD-208ENST00000636843 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
CTSD-208ENST00000636843 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
CTSD-208ENST00000636843 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
CTSD-208ENST00000636843 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
CTSD-208ENST00000636843 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
CTSD-208ENST00000636843 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
CTSD-208ENST00000636843 INE1O15225 51 aa3.83□□□□□ -1.8
CTSD-208ENST00000636843 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
CTSD-208ENST00000636843 MT1AP04731 61 aa3.78□□□□□ -1.8
CTSD-208ENST00000636843 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
CTSD-208ENST00000636843 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
CTSD-208ENST00000636843 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
CTSD-208ENST00000636843 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
CTSD-208ENST00000636843 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
CTSD-208ENST00000636843 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
CTSD-208ENST00000636843 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
CTSD-208ENST00000636843 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
CTSD-208ENST00000636843 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
CTSD-208ENST00000636843 MT3P25713 68 aa3.49□□□□□ -1.85
CTSD-208ENST00000636843 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
CTSD-208ENST00000636843 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
CTSD-208ENST00000636843 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
CTSD-208ENST00000636843 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
CTSD-208ENST00000636843 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
CTSD-208ENST00000636843 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
CTSD-208ENST00000636843 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
CTSD-208ENST00000636843 PRM1P04553 51 aa2.9□□□□□ -1.95
CTSD-208ENST00000636843 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
CTSD-208ENST00000636843 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
CTSD-208ENST00000636843 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
CTSD-208ENST00000636843 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
CTSD-208ENST00000636843 PHGR1C9JFL3 82 aa2.55□□□□□ -2
CTSD-208ENST00000636843 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
CTSD-208ENST00000636843 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
CTSD-208ENST00000636843 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
CTSD-208ENST00000636843 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
CTSD-208ENST00000636843 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms