RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
LINC01943-202ENST00000628090 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
LINC01943-202ENST00000628090 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
LINC01943-202ENST00000628090 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
LINC01943-202ENST00000628090 MDN1Q9NU22 5596 aa4.21□□□□□ -1.73
LINC01943-202ENST00000628090 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
LINC01943-202ENST00000628090 KMT2DO14686 5537 aa4.2□□□□□ -1.74
LINC01943-202ENST00000628090 KRTAP10-5P60370 271 aa4.15□□□□□ -1.75
LINC01943-202ENST00000628090 MT1XP80297 61 aa4.14□□□□□ -1.75
LINC01943-202ENST00000628090 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
LINC01943-202ENST00000628090 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
LINC01943-202ENST00000628090 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
LINC01943-202ENST00000628090 LCE3AQ5TA76 89 aa3.97□□□□□ -1.77
LINC01943-202ENST00000628090 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.78
LINC01943-202ENST00000628090 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
LINC01943-202ENST00000628090 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
LINC01943-202ENST00000628090 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
LINC01943-202ENST00000628090 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
LINC01943-202ENST00000628090 SPRR2EP22531 72 aa3.9□□□□□ -1.79
LINC01943-202ENST00000628090 SPRR2BP35325 72 aa3.9□□□□□ -1.79
LINC01943-202ENST00000628090 SPRR2AP35326 72 aa3.9□□□□□ -1.79
LINC01943-202ENST00000628090 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
LINC01943-202ENST00000628090 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
LINC01943-202ENST00000628090 MT3P25713 68 aa3.85□□□□□ -1.79
LINC01943-202ENST00000628090 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
LINC01943-202ENST00000628090 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
LINC01943-202ENST00000628090 SPRR2DP22532 72 aa3.76□□□□□ -1.81
LINC01943-202ENST00000628090 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
LINC01943-202ENST00000628090 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
LINC01943-202ENST00000628090 DSTQ03001 7570 aaKnown RBP3.65□□□□□ -1.83
LINC01943-202ENST00000628090 MT1EP04732 61 aa3.64□□□□□ -1.83
LINC01943-202ENST00000628090 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
LINC01943-202ENST00000628090 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.83
LINC01943-202ENST00000628090 MT1LQ93083 61 aa3.58□□□□□ -1.84
LINC01943-202ENST00000628090 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
LINC01943-202ENST00000628090 MT1GP13640 62 aa3.55□□□□□ -1.84
LINC01943-202ENST00000628090 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
LINC01943-202ENST00000628090 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
LINC01943-202ENST00000628090 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
LINC01943-202ENST00000628090 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
LINC01943-202ENST00000628090 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
LINC01943-202ENST00000628090 MT1MQ8N339 61 aa3.44□□□□□ -1.86
LINC01943-202ENST00000628090 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
LINC01943-202ENST00000628090 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
LINC01943-202ENST00000628090 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
LINC01943-202ENST00000628090 MT4P47944 62 aa3.33□□□□□ -1.88
LINC01943-202ENST00000628090 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
LINC01943-202ENST00000628090 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
LINC01943-202ENST00000628090 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
LINC01943-202ENST00000628090 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
LINC01943-202ENST00000628090 MT1AP04731 61 aa3.08□□□□□ -1.92
LINC01943-202ENST00000628090 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
LINC01943-202ENST00000628090 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
LINC01943-202ENST00000628090 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
LINC01943-202ENST00000628090 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
LINC01943-202ENST00000628090 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
LINC01943-202ENST00000628090 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
LINC01943-202ENST00000628090 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
LINC01943-202ENST00000628090 INE1O15225 51 aa2.97□□□□□ -1.93
LINC01943-202ENST00000628090 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
LINC01943-202ENST00000628090 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
LINC01943-202ENST00000628090 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
LINC01943-202ENST00000628090 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
LINC01943-202ENST00000628090 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
LINC01943-202ENST00000628090 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
LINC01943-202ENST00000628090 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
LINC01943-202ENST00000628090 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
LINC01943-202ENST00000628090 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
LINC01943-202ENST00000628090 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
LINC01943-202ENST00000628090 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
LINC01943-202ENST00000628090 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
LINC01943-202ENST00000628090 PRM1P04553 51 aa2.29□□□□□ -2.04
LINC01943-202ENST00000628090 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
LINC01943-202ENST00000628090 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
LINC01943-202ENST00000628090 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
LINC01943-202ENST00000628090 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
LINC01943-202ENST00000628090 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 9 ms